RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 NGLY1Q96IV0 654 aa18.68■□□□□ 0.58
CSNK1D-209ENST00000578904 CFAP53Q96M91 514 aa18.68■□□□□ 0.58
CSNK1D-209ENST00000578904 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
CSNK1D-209ENST00000578904 MAP2P11137 1827 aaKnown RBP18.67■□□□□ 0.58
CSNK1D-209ENST00000578904 LMO7Q8WWI1 1683 aa18.67■□□□□ 0.58
CSNK1D-209ENST00000578904 AMPHP49418 695 aa18.67■□□□□ 0.58
CSNK1D-209ENST00000578904 PPM1GO15355 546 aaPredicted RBP18.66■□□□□ 0.58
CSNK1D-209ENST00000578904 EMILIN1Q9Y6C2 1016 aa18.66■□□□□ 0.58
CSNK1D-209ENST00000578904 PEAK1Q9H792 1746 aa18.66■□□□□ 0.58
CSNK1D-209ENST00000578904 NWD2Q9ULI1 1742 aa18.66■□□□□ 0.58
CSNK1D-209ENST00000578904 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
CSNK1D-209ENST00000578904 COL18A1P39060 1754 aa18.65■□□□□ 0.58
CSNK1D-209ENST00000578904 SLIT2O94813 1529 aa18.65■□□□□ 0.58
CSNK1D-209ENST00000578904 POLKQ9UBT6 870 aa18.65■□□□□ 0.58
CSNK1D-209ENST00000578904 AFF2P51816 1311 aa18.65■□□□□ 0.58
CSNK1D-209ENST00000578904 FLT4P35916 1363 aa18.65■□□□□ 0.58
CSNK1D-209ENST00000578904 KIF24Q5T7B8 1368 aa18.65■□□□□ 0.58
CSNK1D-209ENST00000578904 BTG4Q9NY30 223 aa18.64■□□□□ 0.57
CSNK1D-209ENST00000578904 BLMP54132 1417 aaPredicted RBP18.64■□□□□ 0.57
CSNK1D-209ENST00000578904 CAMTA1Q9Y6Y1 1673 aa18.63■□□□□ 0.57
CSNK1D-209ENST00000578904 HOXC9P31274 260 aa18.63■□□□□ 0.57
CSNK1D-209ENST00000578904 CDK12Q9NYV4 1490 aaPredicted RBP18.63■□□□□ 0.57
CSNK1D-209ENST00000578904 NRAPQ86VF7 1730 aa18.63■□□□□ 0.57
CSNK1D-209ENST00000578904 FNBP4Q8N3X1 1017 aaPredicted RBP18.62■□□□□ 0.57
CSNK1D-209ENST00000578904 IP6K1Q92551 441 aa18.62■□□□□ 0.57
CSNK1D-209ENST00000578904 COL5A2P05997 1499 aaPredicted RBP18.62■□□□□ 0.57
CSNK1D-209ENST00000578904 RGPD5Q99666 1765 aa18.61■□□□□ 0.57
CSNK1D-209ENST00000578904 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.61■□□□□ 0.57
CSNK1D-209ENST00000578904 USP21Q9UK80 565 aa18.61■□□□□ 0.57
CSNK1D-209ENST00000578904 AXIN2Q9Y2T1 843 aa18.61■□□□□ 0.57
CSNK1D-209ENST00000578904 MTHFSP49914 203 aa18.6■□□□□ 0.57
CSNK1D-209ENST00000578904 WDR43Q15061 677 aaKnown RBP eCLIP18.6■□□□□ 0.57
CSNK1D-209ENST00000578904 FAM9BQ8IZU0 186 aa18.6■□□□□ 0.57
CSNK1D-209ENST00000578904 STRN4Q9NRL3 753 aa18.6■□□□□ 0.57
CSNK1D-209ENST00000578904 BCL9LQ86UU0 1499 aa18.59■□□□□ 0.57
CSNK1D-209ENST00000578904 INSRP06213 1382 aa18.59■□□□□ 0.57
CSNK1D-209ENST00000578904 EVA1CP58658 441 aa18.59■□□□□ 0.57
CSNK1D-209ENST00000578904 UNC5CLQ8IV45 518 aa18.59■□□□□ 0.57
CSNK1D-209ENST00000578904 ERBB3P21860 1342 aa18.58■□□□□ 0.57
CSNK1D-209ENST00000578904 CSB-PGBD3P0DP91 1061 aa18.58■□□□□ 0.56
CSNK1D-209ENST00000578904 CCDC184Q52MB2 194 aa18.58■□□□□ 0.56
CSNK1D-209ENST00000578904 HSP90AB2PQ58FF8 381 aa18.58■□□□□ 0.56
CSNK1D-209ENST00000578904 PNISRQ8TF01 805 aaKnown RBP18.58■□□□□ 0.56
CSNK1D-209ENST00000578904 ANKRD24Q8TF21 1146 aa18.58■□□□□ 0.56
CSNK1D-209ENST00000578904 LTV1Q96GA3 475 aaPredicted RBP18.58■□□□□ 0.56
CSNK1D-209ENST00000578904 ZNF772Q68DY9 489 aaPredicted RBP18.57■□□□□ 0.56
CSNK1D-209ENST00000578904 NUDCQ9Y266 331 aa18.57■□□□□ 0.56
CSNK1D-209ENST00000578904 UPF1Q92900 1129 aaKnown RBP eCLIP18.56■□□□□ 0.564e-6■□□□□ 10.4
CSNK1D-209ENST00000578904 FAM208AQ9UK61 1670 aaKnown RBP18.56■□□□□ 0.56
CSNK1D-209ENST00000578904 WDR17Q8IZU2 1322 aa18.55■□□□□ 0.56
CSNK1D-209ENST00000578904 CCDC9Q9Y3X0 531 aaKnown RBP18.55■□□□□ 0.56
CSNK1D-209ENST00000578904 ATRNO75882 1429 aa18.55■□□□□ 0.56
CSNK1D-209ENST00000578904 LARP1Q6PKG0 1096 aaKnown RBP18.54■□□□□ 0.56
CSNK1D-209ENST00000578904 YTHDC1Q96MU7 727 aaKnown RBP18.54■□□□□ 0.56
CSNK1D-209ENST00000578904 TRPC5Q9UL62 973 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-209ENST00000578904 CRB1P82279 1406 aa18.54■□□□□ 0.56
CSNK1D-209ENST00000578904 COL3A1P02461 1466 aaPredicted RBP18.53■□□□□ 0.56
CSNK1D-209ENST00000578904 VPS72Q15906 364 aa18.53■□□□□ 0.56
CSNK1D-209ENST00000578904 TOM1L2Q6ZVM7 507 aa18.53■□□□□ 0.56
CSNK1D-209ENST00000578904 EIF4A2Q14240 407 aaKnown RBP18.52■□□□□ 0.56
CSNK1D-209ENST00000578904 DIAPH1O60610 1272 aaKnown RBP18.51■□□□□ 0.55
CSNK1D-209ENST00000578904 PNNQ9H307 717 aaKnown RBP18.51■□□□□ 0.55
CSNK1D-209ENST00000578904 QTRT2Q9H974 415 aaKnown RBP18.51■□□□□ 0.55
CSNK1D-209ENST00000578904 NLRP2Q9NX02 1062 aa18.51■□□□□ 0.55
CSNK1D-209ENST00000578904 SPATA31A5Q5VU36 1347 aa18.5■□□□□ 0.55
CSNK1D-209ENST00000578904 SPATA31A7Q8IWB4 1347 aa18.5■□□□□ 0.55
CSNK1D-209ENST00000578904 CENPBP07199 599 aaPredicted RBP18.5■□□□□ 0.55
CSNK1D-209ENST00000578904 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
CSNK1D-209ENST00000578904 RGPD2P0DJD1 1756 aa18.49■□□□□ 0.55
CSNK1D-209ENST00000578904 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
CSNK1D-209ENST00000578904 GLI3P10071 1580 aa18.48■□□□□ 0.55
CSNK1D-209ENST00000578904 IL13P35225 146 aa18.48■□□□□ 0.55
CSNK1D-209ENST00000578904 GJD4Q96KN9 370 aaPredicted RBP18.48■□□□□ 0.55
CSNK1D-209ENST00000578904 CARD10Q9BWT7 1032 aa18.48■□□□□ 0.55
CSNK1D-209ENST00000578904 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
CSNK1D-209ENST00000578904 NBPF6Q5VWK0 638 aa18.46■□□□□ 0.55
CSNK1D-209ENST00000578904 TCP11L2Q8N4U5 519 aa18.46■□□□□ 0.55
CSNK1D-209ENST00000578904 USHBP1Q8N6Y0 703 aa18.46■□□□□ 0.55
CSNK1D-209ENST00000578904 NBPF4Q96M43 638 aa18.46■□□□□ 0.55
CSNK1D-209ENST00000578904 EYA1Q99502 592 aa18.46■□□□□ 0.55
CSNK1D-209ENST00000578904 RGPD1P0DJD0 1748 aa18.46■□□□□ 0.55
CSNK1D-209ENST00000578904 WNK3Q9BYP7 1800 aa18.45■□□□□ 0.54
CSNK1D-209ENST00000578904 NEFMP07197 916 aa18.45■□□□□ 0.54
CSNK1D-209ENST00000578904 RBM6P78332 1123 aaKnown RBP18.45■□□□□ 0.54
CSNK1D-209ENST00000578904 ADAMTS8Q9UP79 889 aa18.45■□□□□ 0.54
CSNK1D-209ENST00000578904 IGSF1Q8N6C5 1336 aa18.45■□□□□ 0.54
CSNK1D-209ENST00000578904 U2SURPO15042 1029 aaKnown RBP18.44■□□□□ 0.54
CSNK1D-209ENST00000578904 U2AF1L5P0DN76 240 aaPredicted RBP18.44■□□□□ 0.54
CSNK1D-209ENST00000578904 U2AF1Q01081 240 aaKnown RBP eCLIP18.44■□□□□ 0.548e-9■□□□□ 10
CSNK1D-209ENST00000578904 THRAP3Q9Y2W1 955 aaKnown RBP18.44■□□□□ 0.54
CSNK1D-209ENST00000578904 NCAPD2Q15021 1401 aa18.43■□□□□ 0.54
CSNK1D-209ENST00000578904 RXRBP28702 533 aa18.43■□□□□ 0.54
CSNK1D-209ENST00000578904 FAM98CQ17RN3 349 aaKnown RBP18.43■□□□□ 0.54
CSNK1D-209ENST00000578904 NGEFQ8N5V2 710 aa18.43■□□□□ 0.54
CSNK1D-209ENST00000578904 A0A0G2JS52 829 aa18.42■□□□□ 0.54
CSNK1D-209ENST00000578904 MYT1Q01538 1121 aa18.42■□□□□ 0.54
CSNK1D-209ENST00000578904 BARGINQ6ZT62 677 aa18.41■□□□□ 0.54
CSNK1D-209ENST00000578904 DISP2A7MBM2 1401 aa18.4■□□□□ 0.54
CSNK1D-209ENST00000578904 IL2RBP14784 551 aa18.4■□□□□ 0.54
CSNK1D-209ENST00000578904 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms