RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 ATRNO75882 1429 aa11.84□□□□□ -0.51
PPP4R1-210ENST00000578557 ITSN1Q15811 1721 aa11.83□□□□□ -0.52
PPP4R1-210ENST00000578557 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-210ENST00000578557 ARHGEF25Q86VW2 580 aa11.83□□□□□ -0.52
PPP4R1-210ENST00000578557 MIER1Q8N108 512 aa11.83□□□□□ -0.52
PPP4R1-210ENST00000578557 ZC3H6P61129 1189 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-210ENST00000578557 QRICH2Q9H0J4 1663 aa11.81□□□□□ -0.52
PPP4R1-210ENST00000578557 KIAA0232Q92628 1395 aa11.81□□□□□ -0.52
PPP4R1-210ENST00000578557 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
PPP4R1-210ENST00000578557 BARGINQ6ZT62 677 aa11.81□□□□□ -0.52
PPP4R1-210ENST00000578557 CCDC9Q9Y3X0 531 aaKnown RBP11.81□□□□□ -0.52
PPP4R1-210ENST00000578557 NUTM2GQ5VZR2 741 aa11.8□□□□□ -0.52
PPP4R1-210ENST00000578557 CHADLQ6NUI6 762 aa11.8□□□□□ -0.52
PPP4R1-210ENST00000578557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.8□□□□□ -0.52
PPP4R1-210ENST00000578557 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
PPP4R1-210ENST00000578557 CGNL1Q0VF96 1302 aa11.8□□□□□ -0.52
PPP4R1-210ENST00000578557 SPATA31A5Q5VU36 1347 aa11.8□□□□□ -0.52
PPP4R1-210ENST00000578557 SPATA31A7Q8IWB4 1347 aa11.8□□□□□ -0.52
PPP4R1-210ENST00000578557 A0A1W2PP64 1363 aa11.79□□□□□ -0.52
PPP4R1-210ENST00000578557 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
PPP4R1-210ENST00000578557 TOPAZ1Q8N9V7 1692 aa11.78□□□□□ -0.52
PPP4R1-210ENST00000578557 FYB1O15117 783 aa11.78□□□□□ -0.52
PPP4R1-210ENST00000578557 POTEHQ6S545 545 aa11.78□□□□□ -0.52
PPP4R1-210ENST00000578557 TCP11L2Q8N4U5 519 aa11.78□□□□□ -0.52
PPP4R1-210ENST00000578557 CD163L1Q9NR16 1453 aa11.77□□□□□ -0.52
PPP4R1-210ENST00000578557 IP6K1Q92551 441 aa11.77□□□□□ -0.53
PPP4R1-210ENST00000578557 SPATA31A1Q5TZJ5 1347 aa11.77□□□□□ -0.53
PPP4R1-210ENST00000578557 NME9Q86XW9 330 aa11.76□□□□□ -0.53
PPP4R1-210ENST00000578557 SEPT12Q8IYM1 358 aa11.76□□□□□ -0.53
PPP4R1-210ENST00000578557 CARD10Q9BWT7 1032 aa11.76□□□□□ -0.53
PPP4R1-210ENST00000578557 KNSTRNQ9Y448 316 aa11.76□□□□□ -0.53
PPP4R1-210ENST00000578557 TRPM3Q9HCF6 1732 aaPredicted RBP11.76□□□□□ -0.53
PPP4R1-210ENST00000578557 NSD2O96028 1365 aa11.76□□□□□ -0.53
PPP4R1-210ENST00000578557 ALS2Q96Q42 1657 aa11.75□□□□□ -0.53
PPP4R1-210ENST00000578557 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
PPP4R1-210ENST00000578557 CHRNA2Q15822 529 aa11.75□□□□□ -0.53
PPP4R1-210ENST00000578557 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
PPP4R1-210ENST00000578557 STRN4Q9NRL3 753 aa11.75□□□□□ -0.53
PPP4R1-210ENST00000578557 WASHC2AQ641Q2 1341 aa11.75□□□□□ -0.53
PPP4R1-210ENST00000578557 WDR17Q8IZU2 1322 aa11.75□□□□□ -0.53
PPP4R1-210ENST00000578557 SLIT3O75094 1523 aa11.75□□□□□ -0.53
PPP4R1-210ENST00000578557 ABCC6O95255 1503 aa11.75□□□□□ -0.53
PPP4R1-210ENST00000578557 AMPHP49418 695 aa11.74□□□□□ -0.53
PPP4R1-210ENST00000578557 TOM1L2Q6ZVM7 507 aa11.74□□□□□ -0.53
PPP4R1-210ENST00000578557 CCDC7Q96M83 1385 aa11.74□□□□□ -0.53
PPP4R1-210ENST00000578557 BLMP54132 1417 aaPredicted RBP11.74□□□□□ -0.53
PPP4R1-210ENST00000578557 RTL1A6NKG5 1358 aa11.73□□□□□ -0.53
PPP4R1-210ENST00000578557 CSB-PGBD3P0DP91 1061 aa11.73□□□□□ -0.53
PPP4R1-210ENST00000578557 CRB1P82279 1406 aa11.73□□□□□ -0.53
PPP4R1-210ENST00000578557 COL14A1Q05707 1796 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-210ENST00000578557 PDE3BQ13370 1112 aa11.73□□□□□ -0.53
PPP4R1-210ENST00000578557 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-210ENST00000578557 FAM196AQ6ZSG2 479 aa11.73□□□□□ -0.53
PPP4R1-210ENST00000578557 CARD14Q9BXL6 1004 aa11.73□□□□□ -0.53
PPP4R1-210ENST00000578557 PANK3Q9H999 370 aa11.73□□□□□ -0.53
PPP4R1-210ENST00000578557 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
PPP4R1-210ENST00000578557 FAM98CQ17RN3 349 aaKnown RBP11.72□□□□□ -0.53
PPP4R1-210ENST00000578557 UPF1Q92900 1129 aaKnown RBP eCLIP11.72□□□□□ -0.53
PPP4R1-210ENST00000578557 ZBTB47Q9UFB7 747 aaPredicted RBP11.72□□□□□ -0.53
PPP4R1-210ENST00000578557 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.53
PPP4R1-210ENST00000578557 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.53
PPP4R1-210ENST00000578557 A0A0G2JS52 829 aa11.71□□□□□ -0.53
PPP4R1-210ENST00000578557 EXOC5O00471 708 aa11.71□□□□□ -0.53
PPP4R1-210ENST00000578557 MNX1P50219 401 aaPredicted RBP11.71□□□□□ -0.53
PPP4R1-210ENST00000578557 MYT1Q01538 1121 aa11.71□□□□□ -0.53
PPP4R1-210ENST00000578557 LARP1Q6PKG0 1096 aaKnown RBP11.71□□□□□ -0.53
PPP4R1-210ENST00000578557 POLR3GLQ9BT43 218 aa11.71□□□□□ -0.53
PPP4R1-210ENST00000578557 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.53
PPP4R1-210ENST00000578557 RGPD8O14715 1765 aaPredicted RBP11.71□□□□□ -0.54
PPP4R1-210ENST00000578557 ERBB3P21860 1342 aa11.7□□□□□ -0.54
PPP4R1-210ENST00000578557 GGNBP2Q9H3C7 697 aa11.7□□□□□ -0.54
PPP4R1-210ENST00000578557 RGS12O14924 1447 aa11.69□□□□□ -0.54
PPP4R1-210ENST00000578557 NWD2Q9ULI1 1742 aa11.69□□□□□ -0.54
PPP4R1-210ENST00000578557 NPC1L1Q9UHC9 1359 aa11.69□□□□□ -0.54
PPP4R1-210ENST00000578557 KIF7Q2M1P5 1343 aa11.69□□□□□ -0.54
PPP4R1-210ENST00000578557 ZBTB7CA1YPR0 619 aa11.69□□□□□ -0.54
PPP4R1-210ENST00000578557 HOXC9P31274 260 aa11.69□□□□□ -0.54
PPP4R1-210ENST00000578557 DDB1Q16531 1140 aa11.69□□□□□ -0.54
PPP4R1-210ENST00000578557 ANKRD24Q8TF21 1146 aa11.69□□□□□ -0.54
PPP4R1-210ENST00000578557 COL5A2P05997 1499 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-210ENST00000578557 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-210ENST00000578557 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
PPP4R1-210ENST00000578557 PLEKHG2Q9H7P9 1386 aa11.68□□□□□ -0.54
PPP4R1-210ENST00000578557 MAP3K19Q56UN5 1328 aa11.68□□□□□ -0.54
PPP4R1-210ENST00000578557 MORC1Q86VD1 984 aa11.68□□□□□ -0.54
PPP4R1-210ENST00000578557 NLRP2Q9NX02 1062 aa11.68□□□□□ -0.54
PPP4R1-210ENST00000578557 SMG6Q86US8 1419 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-210ENST00000578557 INSRP06213 1382 aa11.67□□□□□ -0.54
PPP4R1-210ENST00000578557 SOX12O15370 315 aa11.67□□□□□ -0.54
PPP4R1-210ENST00000578557 PER1O15534 1290 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-210ENST00000578557 IL2RBP14784 551 aa11.67□□□□□ -0.54
PPP4R1-210ENST00000578557 USP35Q9P2H5 1018 aa11.67□□□□□ -0.54
PPP4R1-210ENST00000578557 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
PPP4R1-210ENST00000578557 CAMTA1Q9Y6Y1 1673 aa11.67□□□□□ -0.54
PPP4R1-210ENST00000578557 FLT4P35916 1363 aa11.67□□□□□ -0.54
PPP4R1-210ENST00000578557 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
PPP4R1-210ENST00000578557 BCL9O00512 1426 aa11.66□□□□□ -0.54
PPP4R1-210ENST00000578557 NRKQ7Z2Y5 1582 aa11.66□□□□□ -0.54
PPP4R1-210ENST00000578557 BAG6P46379 1132 aa11.65□□□□□ -0.54
PPP4R1-210ENST00000578557 NFAT5O94916 1531 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms