RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 PNNQ9H307 717 aaKnown RBP8.91□□□□□ -0.98
KRT39-203ENST00000578078 NUDCQ9Y266 331 aa8.91□□□□□ -0.98
KRT39-203ENST00000578078 SYNMO15061 1565 aa8.91□□□□□ -0.98
KRT39-203ENST00000578078 RALBP1Q15311 655 aa8.91□□□□□ -0.98
KRT39-203ENST00000578078 CDCA8Q53HL2 280 aa8.91□□□□□ -0.98
KRT39-203ENST00000578078 TESK2Q96S53 571 aa8.91□□□□□ -0.98
KRT39-203ENST00000578078 ISY1Q9ULR0 285 aaKnown RBP8.91□□□□□ -0.98
KRT39-203ENST00000578078 USTQ9Y2C2 406 aa8.91□□□□□ -0.98
KRT39-203ENST00000578078 MYO3AQ8NEV4 1616 aa8.9□□□□□ -0.98
KRT39-203ENST00000578078 NOS1P29475 1434 aa8.9□□□□□ -0.98
KRT39-203ENST00000578078 TERF1P54274 439 aa8.9□□□□□ -0.98
KRT39-203ENST00000578078 RBM10P98175 930 aaKnown RBP8.9□□□□□ -0.98
KRT39-203ENST00000578078 FAM9BQ8IZU0 186 aa8.9□□□□□ -0.98
KRT39-203ENST00000578078 RPGRIP1LQ68CZ1 1315 aa8.89□□□□□ -0.99
KRT39-203ENST00000578078 FCHSD2O94868 740 aa8.89□□□□□ -0.99
KRT39-203ENST00000578078 CCDC184Q52MB2 194 aa8.89□□□□□ -0.99
KRT39-203ENST00000578078 GPHNQ9NQX3 736 aaPredicted RBP8.89□□□□□ -0.99
KRT39-203ENST00000578078 MYBBP1AQ9BQG0 1328 aaKnown RBP8.88□□□□□ -0.99
KRT39-203ENST00000578078 AGLP35573 1532 aa8.88□□□□□ -0.99
KRT39-203ENST00000578078 PROCA1Q8NCQ7 364 aaPredicted RBP8.88□□□□□ -0.99
KRT39-203ENST00000578078 LAS1LQ9Y4W2 734 aaKnown RBP8.88□□□□□ -0.99
KRT39-203ENST00000578078 MYOM1P52179 1685 aa8.88□□□□□ -0.99
KRT39-203ENST00000578078 MYO5BQ9ULV0 1848 aa8.88□□□□□ -0.99
KRT39-203ENST00000578078 BRD4O60885 1362 aaPredicted RBP8.88□□□□□ -0.99
KRT39-203ENST00000578078 CNGB1Q14028 1251 aaPredicted RBP8.88□□□□□ -0.99
KRT39-203ENST00000578078 MTERF4Q7Z6M4 381 aaKnown RBP8.88□□□□□ -0.99
KRT39-203ENST00000578078 BANK1Q8NDB2 785 aa8.88□□□□□ -0.99
KRT39-203ENST00000578078 CALR3Q96L12 384 aaKnown RBP8.88□□□□□ -0.99
KRT39-203ENST00000578078 PIK3C2GO75747 1445 aa8.87□□□□□ -0.99
KRT39-203ENST00000578078 ARHGEF40Q8TER5 1519 aa8.87□□□□□ -0.99
KRT39-203ENST00000578078 CLTCQ00610 1675 aaKnown RBP8.87□□□□□ -0.99
KRT39-203ENST00000578078 QRICH2Q9H0J4 1663 aa8.87□□□□□ -0.99
KRT39-203ENST00000578078 ADGRF5Q8IZF2 1346 aa8.87□□□□□ -0.99
KRT39-203ENST00000578078 SND1Q7KZF4 910 aaKnown RBP eCLIP8.87□□□□□ -0.99
KRT39-203ENST00000578078 TMC1Q8TDI8 760 aa8.87□□□□□ -0.99
KRT39-203ENST00000578078 TMUB1Q9BVT8 246 aa8.87□□□□□ -0.99
KRT39-203ENST00000578078 CCDC61Q9Y6R9 512 aa8.87□□□□□ -0.99
KRT39-203ENST00000578078 PARD3Q8TEW0 1356 aa8.87□□□□□ -0.99
KRT39-203ENST00000578078 NEXMIFQ5QGS0 1516 aa8.87□□□□□ -0.99
KRT39-203ENST00000578078 PBXIP1Q96AQ6 731 aa8.86□□□□□ -0.99
KRT39-203ENST00000578078 CHMP4AQ9BY43 222 aa8.86□□□□□ -0.99
KRT39-203ENST00000578078 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
KRT39-203ENST00000578078 GRXCR2A6NFK2 248 aa8.85□□□□□ -0.99
KRT39-203ENST00000578078 CFAP70Q5T0N1 1121 aa8.85□□□□□ -0.99
KRT39-203ENST00000578078 IFNL1Q8IU54 200 aa8.85□□□□□ -0.99
KRT39-203ENST00000578078 FAM177A1Q8N128 213 aaPredicted RBP8.85□□□□□ -0.99
KRT39-203ENST00000578078 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.85□□□□□ -0.99
KRT39-203ENST00000578078 IGSF5Q9NSI5 407 aa8.85□□□□□ -0.99
KRT39-203ENST00000578078 PRDM4Q9UKN5 801 aa8.85□□□□□ -0.99
KRT39-203ENST00000578078 TMEM131LA2VDJ0 1609 aa8.85□□□□□ -0.99
KRT39-203ENST00000578078 TAF7LQ5H9L4 462 aa8.85□□□□□ -0.99
KRT39-203ENST00000578078 NLRP13Q86W25 1043 aa8.85□□□□□ -0.99
KRT39-203ENST00000578078 PANK3Q9H999 370 aa8.85□□□□□ -0.99
KRT39-203ENST00000578078 RRAGDQ9NQL2 400 aaPredicted RBP8.85□□□□□ -0.99
KRT39-203ENST00000578078 SLC52A1Q9NWF4 448 aa8.85□□□□□ -0.99
KRT39-203ENST00000578078 SBNO2Q9Y2G9 1366 aa8.84□□□□□ -0.99
KRT39-203ENST00000578078 OSBPP22059 807 aa8.84□□□□□ -0.99
KRT39-203ENST00000578078 GLMNQ92990 594 aa8.84□□□□□ -0.99
KRT39-203ENST00000578078 NAP1L5Q96NT1 182 aaPredicted RBP8.84□□□□□ -0.99
KRT39-203ENST00000578078 ADGRB1O14514 1584 aa8.84□□□□□ -0.99
KRT39-203ENST00000578078 ARHGEF28Q8N1W1 1705 aaKnown RBP8.83□□□□□ -1
KRT39-203ENST00000578078 ERVK-7P63135 1459 aa8.83□□□□□ -1
KRT39-203ENST00000578078 UNCXA6NJT0 531 aa8.83□□□□□ -1
KRT39-203ENST00000578078 PER1O15534 1290 aaPredicted RBP8.83□□□□□ -1
KRT39-203ENST00000578078 SMAP1Q8IYB5 467 aaPredicted RBP8.83□□□□□ -1
KRT39-203ENST00000578078 IVNS1ABPQ9Y6Y0 642 aa8.83□□□□□ -1
KRT39-203ENST00000578078 ASXL1Q8IXJ9 1541 aa8.83□□□□□ -1
KRT39-203ENST00000578078 WWC1Q8IX03 1113 aa8.82□□□□□ -1
KRT39-203ENST00000578078 PNISRQ8TF01 805 aaKnown RBP8.82□□□□□ -1
KRT39-203ENST00000578078 C14orf93Q9H972 538 aaKnown RBP8.82□□□□□ -1
KRT39-203ENST00000578078 KNSTRNQ9Y448 316 aa8.82□□□□□ -1
KRT39-203ENST00000578078 ZFYVE9O95405 1425 aa8.82□□□□□ -1
KRT39-203ENST00000578078 CSB-PGBD3P0DP91 1061 aa8.81□□□□□ -1
KRT39-203ENST00000578078 POLR3EQ9NVU0 708 aa8.81□□□□□ -1
KRT39-203ENST00000578078 INSRP06213 1382 aa8.81□□□□□ -1
KRT39-203ENST00000578078 LRPPRCP42704 1394 aaKnown RBP8.81□□□□□ -1
KRT39-203ENST00000578078 CC2D1BQ5T0F9 858 aaKnown RBP8.81□□□□□ -1
KRT39-203ENST00000578078 UTP14CQ5TAP6 766 aaKnown RBP8.81□□□□□ -1
KRT39-203ENST00000578078 AKT1S1Q96B36 256 aa8.81□□□□□ -1
KRT39-203ENST00000578078 GDPD2Q9HCC8 539 aa8.81□□□□□ -1
KRT39-203ENST00000578078 SPATA31D1Q6ZQQ2 1576 aa8.81□□□□□ -1
KRT39-203ENST00000578078 IDI1Q13907 227 aa8.8□□□□□ -1
KRT39-203ENST00000578078 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
KRT39-203ENST00000578078 FSD2A1L4K1 749 aa8.79□□□□□ -1
KRT39-203ENST00000578078 TBC1D12O60347 775 aa8.79□□□□□ -1
KRT39-203ENST00000578078 RFC5P40937 340 aa8.79□□□□□ -1
KRT39-203ENST00000578078 DSG2Q14126 1118 aa8.79□□□□□ -1
KRT39-203ENST00000578078 NPC1L1Q9UHC9 1359 aa8.79□□□□□ -1
KRT39-203ENST00000578078 POM121CA8CG34 1229 aa8.78□□□□□ -1
KRT39-203ENST00000578078 SSTR3P32745 418 aaPredicted RBP8.78□□□□□ -1
KRT39-203ENST00000578078 PDE3BQ13370 1112 aa8.78□□□□□ -1
KRT39-203ENST00000578078 BEGAINQ9BUH8 593 aa8.78□□□□□ -1
KRT39-203ENST00000578078 RBM47A0AV96 593 aaKnown RBP8.78□□□□□ -1
KRT39-203ENST00000578078 PTGDRQ13258 359 aa8.78□□□□□ -1
KRT39-203ENST00000578078 ESF1Q9H501 851 aaKnown RBP8.78□□□□□ -1
KRT39-203ENST00000578078 TRAK1Q9UPV9 953 aa8.78□□□□□ -1
KRT39-203ENST00000578078 USP32Q8NFA0 1604 aa8.77□□□□□ -1
KRT39-203ENST00000578078 VIRMAQ69YN4 1812 aaKnown RBP8.77□□□□□ -1.01
KRT39-203ENST00000578078 TMEM259Q4ZIN3 620 aa8.77□□□□□ -1.01
KRT39-203ENST00000578078 CCDC125Q86Z20 511 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms