RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 ZBTB7CA1YPR0 619 aa20.85■□□□□ 0.93
PPP4R1-206ENST00000577779 TXNRD1Q16881 649 aa20.85■□□□□ 0.93
PPP4R1-206ENST00000577779 SGIP1Q9BQI5 828 aa20.85■□□□□ 0.93
PPP4R1-206ENST00000577779 CDK19Q9BWU1 502 aa20.85■□□□□ 0.93
PPP4R1-206ENST00000577779 TOPAZ1Q8N9V7 1692 aa20.85■□□□□ 0.93
PPP4R1-206ENST00000577779 NLRP13Q86W25 1043 aa20.84■□□□□ 0.93
PPP4R1-206ENST00000577779 ARHGEF28Q8N1W1 1705 aaKnown RBP20.84■□□□□ 0.93
PPP4R1-206ENST00000577779 MARCH10Q8NA82 808 aaPredicted RBP20.83■□□□□ 0.93
PPP4R1-206ENST00000577779 ARXQ96QS3 562 aa20.83■□□□□ 0.93
PPP4R1-206ENST00000577779 CCDC61Q9Y6R9 512 aa20.83■□□□□ 0.93
PPP4R1-206ENST00000577779 TOM1L2Q6ZVM7 507 aa20.82■□□□□ 0.92
PPP4R1-206ENST00000577779 KDM2AQ9Y2K7 1162 aa20.82■□□□□ 0.92
PPP4R1-206ENST00000577779 AKAP12Q02952 1782 aa20.82■□□□□ 0.92
PPP4R1-206ENST00000577779 BCL9O00512 1426 aa20.81■□□□□ 0.92
PPP4R1-206ENST00000577779 PLEKHG3A1L390 1219 aa20.81■□□□□ 0.92
PPP4R1-206ENST00000577779 GPR162Q16538 588 aa20.81■□□□□ 0.92
PPP4R1-206ENST00000577779 MAP3K5Q99683 1374 aa20.8■□□□□ 0.92
PPP4R1-206ENST00000577779 WNK3Q9BYP7 1800 aa20.79■□□□□ 0.92
PPP4R1-206ENST00000577779 AATKQ6ZMQ8 1374 aa20.79■□□□□ 0.92
PPP4R1-206ENST00000577779 DCAF11Q8TEB1 546 aa20.78■□□□□ 0.92
PPP4R1-206ENST00000577779 CDCA7Q9BWT1 371 aaPredicted RBP20.77■□□□□ 0.92
PPP4R1-206ENST00000577779 WDR17Q8IZU2 1322 aa20.75■□□□□ 0.91
PPP4R1-206ENST00000577779 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
PPP4R1-206ENST00000577779 NLRP6P59044 892 aa20.72■□□□□ 0.91
PPP4R1-206ENST00000577779 KLHL34Q8N239 644 aa20.72■□□□□ 0.91
PPP4R1-206ENST00000577779 PPIP5K1Q6PFW1 1433 aa20.71■□□□□ 0.91
PPP4R1-206ENST00000577779 SHANK3Q9BYB0 1731 aa20.71■□□□□ 0.91
PPP4R1-206ENST00000577779 AXIN2Q9Y2T1 843 aa20.71■□□□□ 0.91
PPP4R1-206ENST00000577779 COL18A1P39060 1754 aa20.71■□□□□ 0.91
PPP4R1-206ENST00000577779 BRD4O60885 1362 aaPredicted RBP20.71■□□□□ 0.91
PPP4R1-206ENST00000577779 SLIT3O75094 1523 aa20.7■□□□□ 0.9
PPP4R1-206ENST00000577779 EXOC5O00471 708 aa20.7■□□□□ 0.9
PPP4R1-206ENST00000577779 STAC3Q96MF2 364 aa20.7■□□□□ 0.9
PPP4R1-206ENST00000577779 PAPPAQ13219 1627 aa20.68■□□□□ 0.9
PPP4R1-206ENST00000577779 CSB-PGBD3P0DP91 1061 aa20.68■□□□□ 0.9
PPP4R1-206ENST00000577779 SRPK2P78362 688 aaKnown RBP20.68■□□□□ 0.9
PPP4R1-206ENST00000577779 CARD10Q9BWT7 1032 aa20.68■□□□□ 0.9
PPP4R1-206ENST00000577779 NHSQ6T4R5 1651 aa20.67■□□□□ 0.9
PPP4R1-206ENST00000577779 POLD1P28340 1107 aa20.66■□□□□ 0.9
PPP4R1-206ENST00000577779 ZNF827Q17R98 1081 aa20.66■□□□□ 0.9
PPP4R1-206ENST00000577779 CPSF1Q10570 1443 aaKnown RBP20.66■□□□□ 0.9
PPP4R1-206ENST00000577779 ACSBG1Q96GR2 724 aa20.65■□□□□ 0.9
PPP4R1-206ENST00000577779 RGPD5Q99666 1765 aa20.64■□□□□ 0.9
PPP4R1-206ENST00000577779 USP6P35125 1406 aa20.64■□□□□ 0.89
PPP4R1-206ENST00000577779 TNS2Q63HR2 1409 aa20.64■□□□□ 0.89
PPP4R1-206ENST00000577779 CABP2Q9NPB3 220 aa20.63■□□□□ 0.89
PPP4R1-206ENST00000577779 PIK3C2AO00443 1686 aa20.62■□□□□ 0.89
PPP4R1-206ENST00000577779 SLC16A10Q8TF71 515 aa20.62■□□□□ 0.89
PPP4R1-206ENST00000577779 CCDC7Q96M83 1385 aa20.61■□□□□ 0.89
PPP4R1-206ENST00000577779 ARHGEF25Q86VW2 580 aa20.61■□□□□ 0.89
PPP4R1-206ENST00000577779 NLGN2Q8NFZ4 835 aa20.61■□□□□ 0.89
PPP4R1-206ENST00000577779 BTAF1O14981 1849 aa20.61■□□□□ 0.89
PPP4R1-206ENST00000577779 KAT6BQ8WYB5 2073 aa20.6■□□□□ 0.89
PPP4R1-206ENST00000577779 GRIN3BO60391 1043 aa20.6■□□□□ 0.89
PPP4R1-206ENST00000577779 CABP1Q9NZU7 370 aa20.6■□□□□ 0.89
PPP4R1-206ENST00000577779 TRPM1Q7Z4N2 1603 aa20.6■□□□□ 0.89
PPP4R1-206ENST00000577779 SOX12O15370 315 aa20.59■□□□□ 0.89
PPP4R1-206ENST00000577779 LRRC4BQ9NT99 713 aa20.59■□□□□ 0.89
PPP4R1-206ENST00000577779 ABCC6O95255 1503 aa20.58■□□□□ 0.89
PPP4R1-206ENST00000577779 KCNH5Q8NCM2 988 aa20.58■□□□□ 0.89
PPP4R1-206ENST00000577779 ATP10DQ9P241 1426 aa20.58■□□□□ 0.88
PPP4R1-206ENST00000577779 QRICH2Q9H0J4 1663 aa20.58■□□□□ 0.88
PPP4R1-206ENST00000577779 YBX3P16989 372 aaKnown RBP eCLIP20.57■□□□□ 0.88
PPP4R1-206ENST00000577779 COL24A1Q17RW2 1714 aa20.57■□□□□ 0.88
PPP4R1-206ENST00000577779 QSER1Q2KHR3 1735 aa20.57■□□□□ 0.88
PPP4R1-206ENST00000577779 AKT1S1Q96B36 256 aa20.57■□□□□ 0.88
PPP4R1-206ENST00000577779 HSPA6P17066 643 aa20.56■□□□□ 0.88
PPP4R1-206ENST00000577779 GPBP1L1Q9HC44 474 aaPredicted RBP20.55■□□□□ 0.88
PPP4R1-206ENST00000577779 PNPLA7Q6ZV29 1317 aa20.54■□□□□ 0.88
PPP4R1-206ENST00000577779 CENPJQ9HC77 1338 aaPredicted RBP20.54■□□□□ 0.88
PPP4R1-206ENST00000577779 KIAA1210Q9ULL0 1709 aa20.54■□□□□ 0.88
PPP4R1-206ENST00000577779 TFCP2L1Q9NZI6 479 aa20.53■□□□□ 0.88
PPP4R1-206ENST00000577779 RAB3GAP2Q9H2M9 1393 aa20.53■□□□□ 0.88
PPP4R1-206ENST00000577779 SLC27A3Q5K4L6 730 aa20.52■□□□□ 0.88
PPP4R1-206ENST00000577779 NBPF1Q3BBV0 1214 aa20.51■□□□□ 0.87
PPP4R1-206ENST00000577779 TTC21BQ7Z4L5 1316 aa20.51■□□□□ 0.87
PPP4R1-206ENST00000577779 TUBGCP6Q96RT7 1819 aa20.5■□□□□ 0.87
PPP4R1-206ENST00000577779 NFAT5O94916 1531 aa20.5■□□□□ 0.87
PPP4R1-206ENST00000577779 IL2RBP14784 551 aa20.5■□□□□ 0.87
PPP4R1-206ENST00000577779 NLRP2Q9NX02 1062 aa20.5■□□□□ 0.87
PPP4R1-206ENST00000577779 ZNF526Q8TF50 670 aaPredicted RBP20.48■□□□□ 0.87
PPP4R1-206ENST00000577779 KCNQ4P56696 695 aa20.46■□□□□ 0.87
PPP4R1-206ENST00000577779 ZNF692Q9BU19 519 aaPredicted RBP20.46■□□□□ 0.87
PPP4R1-206ENST00000577779 ERBB3P21860 1342 aa20.46■□□□□ 0.87
PPP4R1-206ENST00000577779 TTC21AQ8NDW8 1320 aa20.46■□□□□ 0.87
PPP4R1-206ENST00000577779 ADCY9O60503 1353 aa20.44■□□□□ 0.86
PPP4R1-206ENST00000577779 EVC2Q86UK5 1308 aa20.42■□□□□ 0.86
PPP4R1-206ENST00000577779 DDX54Q8TDD1 881 aaKnown RBP20.41■□□□□ 0.86
PPP4R1-206ENST00000577779 SYTL4Q96C24 671 aaPredicted RBP20.41■□□□□ 0.86
PPP4R1-206ENST00000577779 MSL1Q68DK7 614 aa20.4■□□□□ 0.86
PPP4R1-206ENST00000577779 ANKRD24Q8TF21 1146 aa20.39■□□□□ 0.85
PPP4R1-206ENST00000577779 KTN1Q86UP2 1357 aaKnown RBP20.38■□□□□ 0.85
PPP4R1-206ENST00000577779 COL23A1Q86Y22 540 aaPredicted RBP20.38■□□□□ 0.85
PPP4R1-206ENST00000577779 CD2APQ9Y5K6 639 aa20.38■□□□□ 0.85
PPP4R1-206ENST00000577779 LTN1O94822 1766 aa20.38■□□□□ 0.85
PPP4R1-206ENST00000577779 LY75O60449 1722 aa20.38■□□□□ 0.85
PPP4R1-206ENST00000577779 PRIM1P49642 420 aaKnown RBP20.37■□□□□ 0.85
PPP4R1-206ENST00000577779 CCNL1Q9UK58 526 aaPredicted RBP20.37■□□□□ 0.85
PPP4R1-206ENST00000577779 APLP1P51693 650 aa20.36■□□□□ 0.85
PPP4R1-206ENST00000577779 ANKRD36BQ8N2N9 1353 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms