RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 NRAPQ86VF7 1730 aa27.34■■□□□ 1.97
SUPT4H1-202ENST00000577396 ANKRD26Q9UPS8 1709 aa27.34■■□□□ 1.97
SUPT4H1-202ENST00000577396 IP6K1Q92551 441 aa27.34■■□□□ 1.97
SUPT4H1-202ENST00000577396 MORC1Q86VD1 984 aa27.33■■□□□ 1.97
SUPT4H1-202ENST00000577396 GJD4Q96KN9 370 aaPredicted RBP27.33■■□□□ 1.97
SUPT4H1-202ENST00000577396 CC2D1BQ5T0F9 858 aaKnown RBP27.32■■□□□ 1.96
SUPT4H1-202ENST00000577396 STRN4Q9NRL3 753 aa27.32■■□□□ 1.96
SUPT4H1-202ENST00000577396 COL5A2P05997 1499 aaPredicted RBP27.32■■□□□ 1.96
SUPT4H1-202ENST00000577396 LTN1O94822 1766 aa27.32■■□□□ 1.96
SUPT4H1-202ENST00000577396 ABCC6O95255 1503 aa27.32■■□□□ 1.96
SUPT4H1-202ENST00000577396 EVA1CP58658 441 aa27.31■■□□□ 1.96
SUPT4H1-202ENST00000577396 RBM6P78332 1123 aaKnown RBP27.31■■□□□ 1.96
SUPT4H1-202ENST00000577396 RXRBP28702 533 aa27.3■■□□□ 1.96
SUPT4H1-202ENST00000577396 TNNT2P45379 298 aaPredicted RBP27.3■■□□□ 1.96
SUPT4H1-202ENST00000577396 POLKQ9UBT6 870 aa27.3■■□□□ 1.96
SUPT4H1-202ENST00000577396 HOXC9P31274 260 aa27.3■■□□□ 1.96
SUPT4H1-202ENST00000577396 LARP1Q6PKG0 1096 aaKnown RBP27.3■■□□□ 1.96
SUPT4H1-202ENST00000577396 EMILIN1Q9Y6C2 1016 aa27.29■■□□□ 1.96
SUPT4H1-202ENST00000577396 AMPHP49418 695 aa27.28■■□□□ 1.96
SUPT4H1-202ENST00000577396 SPATA31A5Q5VU36 1347 aa27.28■■□□□ 1.96
SUPT4H1-202ENST00000577396 SPATA31A7Q8IWB4 1347 aa27.28■■□□□ 1.96
SUPT4H1-202ENST00000577396 RGPD5Q99666 1765 aa27.28■■□□□ 1.96
SUPT4H1-202ENST00000577396 KIF24Q5T7B8 1368 aa27.27■■□□□ 1.96
SUPT4H1-202ENST00000577396 BLMP54132 1417 aaPredicted RBP27.26■■□□□ 1.95
SUPT4H1-202ENST00000577396 WDR17Q8IZU2 1322 aa27.26■■□□□ 1.95
SUPT4H1-202ENST00000577396 RTL1A6NKG5 1358 aa27.25■■□□□ 1.95
SUPT4H1-202ENST00000577396 ILDR2Q71H61 639 aa27.25■■□□□ 1.95
SUPT4H1-202ENST00000577396 MAP2P11137 1827 aaKnown RBP27.25■■□□□ 1.95
SUPT4H1-202ENST00000577396 ERBB3P21860 1342 aa27.25■■□□□ 1.95
SUPT4H1-202ENST00000577396 SPATA31A1Q5TZJ5 1347 aa27.25■■□□□ 1.95
SUPT4H1-202ENST00000577396 GLI3P10071 1580 aa27.24■■□□□ 1.95
SUPT4H1-202ENST00000577396 HSP90AB2PQ58FF8 381 aa27.24■■□□□ 1.95
SUPT4H1-202ENST00000577396 CCDC9Q9Y3X0 531 aaKnown RBP27.24■■□□□ 1.95
SUPT4H1-202ENST00000577396 ONECUT3O60422 494 aaPredicted RBP27.23■■□□□ 1.95
SUPT4H1-202ENST00000577396 CNGB1Q14028 1251 aaPredicted RBP27.23■■□□□ 1.95
SUPT4H1-202ENST00000577396 ANKRD24Q8TF21 1146 aa27.23■■□□□ 1.95
SUPT4H1-202ENST00000577396 PEAK1Q9H792 1746 aa27.23■■□□□ 1.95
SUPT4H1-202ENST00000577396 FLT4P35916 1363 aa27.23■■□□□ 1.95
SUPT4H1-202ENST00000577396 INSRP06213 1382 aa27.21■■□□□ 1.95
SUPT4H1-202ENST00000577396 CRB1P82279 1406 aa27.21■■□□□ 1.95
SUPT4H1-202ENST00000577396 PPM1GO15355 546 aaPredicted RBP27.2■■□□□ 1.95
SUPT4H1-202ENST00000577396 TOM1L2Q6ZVM7 507 aa27.19■■□□□ 1.94
SUPT4H1-202ENST00000577396 SMG6Q86US8 1419 aaKnown RBP27.19■■□□□ 1.94
SUPT4H1-202ENST00000577396 CSB-PGBD3P0DP91 1061 aa27.19■■□□□ 1.94
SUPT4H1-202ENST00000577396 CARD10Q9BWT7 1032 aa27.19■■□□□ 1.94
SUPT4H1-202ENST00000577396 CDK12Q9NYV4 1490 aaPredicted RBP27.18■■□□□ 1.94
SUPT4H1-202ENST00000577396 LTV1Q96GA3 475 aaPredicted RBP27.18■■□□□ 1.94
SUPT4H1-202ENST00000577396 USP35Q9P2H5 1018 aa27.18■■□□□ 1.94
SUPT4H1-202ENST00000577396 FAM98CQ17RN3 349 aaKnown RBP27.16■■□□□ 1.94
SUPT4H1-202ENST00000577396 BARGINQ6ZT62 677 aa27.16■■□□□ 1.94
SUPT4H1-202ENST00000577396 TCP11L2Q8N4U5 519 aa27.16■■□□□ 1.94
SUPT4H1-202ENST00000577396 THRAP3Q9Y2W1 955 aaKnown RBP27.16■■□□□ 1.94
SUPT4H1-202ENST00000577396 MTHFSP49914 203 aa27.15■■□□□ 1.94
SUPT4H1-202ENST00000577396 RGS12O14924 1447 aa27.14■■□□□ 1.94
SUPT4H1-202ENST00000577396 NLRP2Q9NX02 1062 aa27.14■■□□□ 1.94
SUPT4H1-202ENST00000577396 PARD3Q8TEW0 1356 aa27.12■■□□□ 1.93
SUPT4H1-202ENST00000577396 SEPT12Q8IYM1 358 aa27.12■■□□□ 1.93
SUPT4H1-202ENST00000577396 NBPF6Q5VWK0 638 aa27.11■■□□□ 1.93
SUPT4H1-202ENST00000577396 NBPF4Q96M43 638 aa27.11■■□□□ 1.93
SUPT4H1-202ENST00000577396 PPP2R1AP30153 589 aa27.09■■□□□ 1.93
SUPT4H1-202ENST00000577396 EIF4A2Q14240 407 aaKnown RBP27.09■■□□□ 1.93
SUPT4H1-202ENST00000577396 THSD7AQ9UPZ6 1657 aa27.06■■□□□ 1.92
SUPT4H1-202ENST00000577396 RALBP1Q15311 655 aa27.05■■□□□ 1.92
SUPT4H1-202ENST00000577396 EYA1Q99502 592 aa27.05■■□□□ 1.92
SUPT4H1-202ENST00000577396 FAM208AQ9UK61 1670 aaKnown RBP27.05■■□□□ 1.92
SUPT4H1-202ENST00000577396 RGPD2P0DJD1 1756 aa27.05■■□□□ 1.92
SUPT4H1-202ENST00000577396 DISP2A7MBM2 1401 aa27.04■■□□□ 1.92
SUPT4H1-202ENST00000577396 IL13P35225 146 aa27.04■■□□□ 1.92
SUPT4H1-202ENST00000577396 CDCA7Q9BWT1 371 aaPredicted RBP27.04■■□□□ 1.92
SUPT4H1-202ENST00000577396 USHBP1Q8N6Y0 703 aa27.02■■□□□ 1.92
SUPT4H1-202ENST00000577396 A0A0G2JS52 829 aa27.01■■□□□ 1.92
SUPT4H1-202ENST00000577396 MYT1Q01538 1121 aa27.01■■□□□ 1.92
SUPT4H1-202ENST00000577396 NCAPD2Q15021 1401 aa27.01■■□□□ 1.91
SUPT4H1-202ENST00000577396 PRKRIP1Q9H875 184 aaPredicted RBP27.01■■□□□ 1.91
SUPT4H1-202ENST00000577396 EP400Q96L91 3159 aa27■■□□□ 1.91
SUPT4H1-202ENST00000577396 IL2RBP14784 551 aa27■■□□□ 1.91
SUPT4H1-202ENST00000577396 BRWD3Q6RI45 1802 aa26.99■■□□□ 1.91
SUPT4H1-202ENST00000577396 IGSF1Q8N6C5 1336 aa26.98■■□□□ 1.91
SUPT4H1-202ENST00000577396 KRT27Q7Z3Y8 459 aa26.98■■□□□ 1.91
SUPT4H1-202ENST00000577396 COL3A1P02461 1466 aaPredicted RBP26.97■■□□□ 1.91
SUPT4H1-202ENST00000577396 DIAPH1O60610 1272 aaKnown RBP26.97■■□□□ 1.91
SUPT4H1-202ENST00000577396 PARP4Q9UKK3 1724 aaKnown RBP26.96■■□□□ 1.91
SUPT4H1-202ENST00000577396 DDB1Q16531 1140 aa26.96■■□□□ 1.91
SUPT4H1-202ENST00000577396 WNK3Q9BYP7 1800 aa26.96■■□□□ 1.91
SUPT4H1-202ENST00000577396 EXOC5O00471 708 aa26.94■■□□□ 1.9
SUPT4H1-202ENST00000577396 MYBBP1AQ9BQG0 1328 aaKnown RBP26.93■■□□□ 1.9
SUPT4H1-202ENST00000577396 MEGF6O75095 1541 aa26.93■■□□□ 1.9
SUPT4H1-202ENST00000577396 PDE3BQ13370 1112 aa26.93■■□□□ 1.9
SUPT4H1-202ENST00000577396 CFAP53Q96M91 514 aa26.93■■□□□ 1.9
SUPT4H1-202ENST00000577396 RAPGEF4Q8WZA2 1011 aa26.91■■□□□ 1.9
SUPT4H1-202ENST00000577396 RGPD1P0DJD0 1748 aa26.91■■□□□ 1.9
SUPT4H1-202ENST00000577396 LRRC37A3O60309 1634 aa26.91■■□□□ 1.9
SUPT4H1-202ENST00000577396 FAM182BQ5T319 152 aa26.9■■□□□ 1.9
SUPT4H1-202ENST00000577396 AEBP1Q8IUX7 1158 aa26.9■■□□□ 1.9
SUPT4H1-202ENST00000577396 OVOS2A0A0G2JMS6 1433 aa26.89■■□□□ 1.9
SUPT4H1-202ENST00000577396 KDRP35968 1356 aa26.89■■□□□ 1.9
SUPT4H1-202ENST00000577396 TATP17735 454 aaPredicted RBP26.89■■□□□ 1.9
SUPT4H1-202ENST00000577396 SULT6B1Q6IMI4 303 aa26.89■■□□□ 1.9
SUPT4H1-202ENST00000577396 MARCH10Q8NA82 808 aaPredicted RBP26.89■■□□□ 1.9
SUPT4H1-202ENST00000577396 TNS2Q63HR2 1409 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms