RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 COL3A1P02461 1466 aaPredicted RBP21.93■■□□□ 1.1
ERCC4-208ENST00000576348 EIF4A2Q14240 407 aaKnown RBP21.93■■□□□ 1.1
ERCC4-208ENST00000576348 ADAMTS8Q9UP79 889 aa21.93■■□□□ 1.1
ERCC4-208ENST00000576348 PHRF1Q9P1Y6 1649 aaKnown RBP21.92■■□□□ 1.1
ERCC4-208ENST00000576348 NUTM2BA6NNL0 878 aaPredicted RBP21.92■■□□□ 1.1
ERCC4-208ENST00000576348 NUTM2EB1AL46 878 aaPredicted RBP21.92■■□□□ 1.1
ERCC4-208ENST00000576348 IL13P35225 146 aa21.92■■□□□ 1.1
ERCC4-208ENST00000576348 CHRNA2Q15822 529 aa21.92■■□□□ 1.1
ERCC4-208ENST00000576348 NUTM2AQ8IVF1 878 aaPredicted RBP21.92■■□□□ 1.1
ERCC4-208ENST00000576348 MAP2P11137 1827 aaKnown RBP21.9■■□□□ 1.1
ERCC4-208ENST00000576348 PNNQ9H307 717 aaKnown RBP21.9■■□□□ 1.1
ERCC4-208ENST00000576348 BLMP54132 1417 aaPredicted RBP21.89■■□□□ 1.1
ERCC4-208ENST00000576348 NEFMP07197 916 aa21.89■■□□□ 1.09
ERCC4-208ENST00000576348 CSB-PGBD3P0DP91 1061 aa21.89■■□□□ 1.09
ERCC4-208ENST00000576348 PEAK1Q9H792 1746 aa21.89■■□□□ 1.09
ERCC4-208ENST00000576348 ADAMTS2O95450 1211 aa21.88■■□□□ 1.09
ERCC4-208ENST00000576348 ANKRD24Q8TF21 1146 aa21.88■■□□□ 1.09
ERCC4-208ENST00000576348 HNRNPUQ00839 825 aaKnown RBP eCLIP21.87■■□□□ 1.09
ERCC4-208ENST00000576348 COL22A1Q8NFW1 1626 aaPredicted RBP21.87■■□□□ 1.09
ERCC4-208ENST00000576348 CCDC146Q8IYE0 955 aa21.86■■□□□ 1.09
ERCC4-208ENST00000576348 HMOX1P09601 288 aa21.85■■□□□ 1.09
ERCC4-208ENST00000576348 ABCC6O95255 1503 aa21.85■■□□□ 1.09
ERCC4-208ENST00000576348 LTN1O94822 1766 aa21.84■■□□□ 1.09
ERCC4-208ENST00000576348 SPATA31A6Q5VVP1 1343 aa21.84■■□□□ 1.09
ERCC4-208ENST00000576348 MAPK8IP3Q9UPT6 1336 aa21.84■■□□□ 1.09
ERCC4-208ENST00000576348 CRYBG1Q9Y4K1 1723 aa21.84■■□□□ 1.09
ERCC4-208ENST00000576348 EVA1CP58658 441 aa21.84■■□□□ 1.09
ERCC4-208ENST00000576348 AXIN2Q9Y2T1 843 aa21.84■■□□□ 1.09
ERCC4-208ENST00000576348 FAM83GA6ND36 823 aa21.83■■□□□ 1.09
ERCC4-208ENST00000576348 FCHSD2O94868 740 aa21.83■■□□□ 1.09
ERCC4-208ENST00000576348 SULT6B1Q6IMI4 303 aa21.83■■□□□ 1.09
ERCC4-208ENST00000576348 RUNDC1Q96C34 613 aa21.83■■□□□ 1.09
ERCC4-208ENST00000576348 EYA1Q99502 592 aa21.82■■□□□ 1.08
ERCC4-208ENST00000576348 NLRP2Q9NX02 1062 aa21.82■■□□□ 1.08
ERCC4-208ENST00000576348 ABCA3Q99758 1704 aa21.82■■□□□ 1.08
ERCC4-208ENST00000576348 SHPRHQ149N8 1683 aa21.82■■□□□ 1.08
ERCC4-208ENST00000576348 MEX3CQ5U5Q3 659 aaKnown RBP21.81■■□□□ 1.08
ERCC4-208ENST00000576348 STRN4Q9NRL3 753 aa21.81■■□□□ 1.08
ERCC4-208ENST00000576348 ERBB3P21860 1342 aa21.8■■□□□ 1.08
ERCC4-208ENST00000576348 IGSF1Q8N6C5 1336 aa21.8■■□□□ 1.08
ERCC4-208ENST00000576348 PRKAR2BP31323 418 aa21.8■■□□□ 1.08
ERCC4-208ENST00000576348 FBXO41Q8TF61 875 aa21.79■■□□□ 1.08
ERCC4-208ENST00000576348 RSPH6AQ9H0K4 717 aa21.79■■□□□ 1.08
ERCC4-208ENST00000576348 BTG4Q9NY30 223 aa21.79■■□□□ 1.08
ERCC4-208ENST00000576348 NBPF6Q5VWK0 638 aa21.78■■□□□ 1.08
ERCC4-208ENST00000576348 AEBP1Q8IUX7 1158 aa21.78■■□□□ 1.08
ERCC4-208ENST00000576348 USHBP1Q8N6Y0 703 aa21.78■■□□□ 1.08
ERCC4-208ENST00000576348 NBPF4Q96M43 638 aa21.78■■□□□ 1.08
ERCC4-208ENST00000576348 SENP3-EIF4A1A0A087X0R7 540 aa21.77■■□□□ 1.08
ERCC4-208ENST00000576348 TOM1L2Q6ZVM7 507 aa21.77■■□□□ 1.08
ERCC4-208ENST00000576348 APAF1O14727 1248 aa21.76■■□□□ 1.07
ERCC4-208ENST00000576348 NGLY1Q96IV0 654 aa21.76■■□□□ 1.07
ERCC4-208ENST00000576348 C8orf37Q96NL8 207 aa21.76■■□□□ 1.07
ERCC4-208ENST00000576348 WDR17Q8IZU2 1322 aa21.76■■□□□ 1.07
ERCC4-208ENST00000576348 SALL2Q9Y467 1007 aaPredicted RBP21.75■■□□□ 1.07
ERCC4-208ENST00000576348 TCP11L2Q8N4U5 519 aa21.74■■□□□ 1.07
ERCC4-208ENST00000576348 COL5A2P05997 1499 aaPredicted RBP21.74■■□□□ 1.07
ERCC4-208ENST00000576348 CAMTA1Q9Y6Y1 1673 aa21.74■■□□□ 1.07
ERCC4-208ENST00000576348 COL14A1Q05707 1796 aaKnown RBP21.74■■□□□ 1.07
ERCC4-208ENST00000576348 PLEKHF1Q96S99 279 aa21.73■■□□□ 1.07
ERCC4-208ENST00000576348 NGEFQ8N5V2 710 aa21.72■■□□□ 1.07
ERCC4-208ENST00000576348 RAPGEF4Q8WZA2 1011 aa21.72■■□□□ 1.07
ERCC4-208ENST00000576348 KDRP35968 1356 aa21.72■■□□□ 1.07
ERCC4-208ENST00000576348 COL18A1P39060 1754 aa21.71■■□□□ 1.07
ERCC4-208ENST00000576348 NEUROD2Q15784 382 aa21.71■■□□□ 1.07
ERCC4-208ENST00000576348 LARP1Q6PKG0 1096 aaKnown RBP21.71■■□□□ 1.07
ERCC4-208ENST00000576348 RRP7AQ9Y3A4 280 aaKnown RBP21.71■■□□□ 1.07
ERCC4-208ENST00000576348 LMO7Q8WWI1 1683 aa21.7■■□□□ 1.06
ERCC4-208ENST00000576348 ZBED9Q6R2W3 1325 aa21.7■■□□□ 1.06
ERCC4-208ENST00000576348 TATP17735 454 aaPredicted RBP21.69■■□□□ 1.06
ERCC4-208ENST00000576348 NFE2L2Q16236 605 aa21.69■■□□□ 1.06
ERCC4-208ENST00000576348 PHACTR3Q96KR7 559 aa21.69■■□□□ 1.06
ERCC4-208ENST00000576348 CARD10Q9BWT7 1032 aa21.69■■□□□ 1.06
ERCC4-208ENST00000576348 RGPD1P0DJD0 1748 aa21.69■■□□□ 1.06
ERCC4-208ENST00000576348 TMPOP42166 694 aaKnown RBP21.68■■□□□ 1.06
ERCC4-208ENST00000576348 CCDC9Q9Y3X0 531 aaKnown RBP21.68■■□□□ 1.06
ERCC4-208ENST00000576348 LRP6O75581 1613 aa21.68■■□□□ 1.06
ERCC4-208ENST00000576348 CRB1P82279 1406 aa21.67■■□□□ 1.06
ERCC4-208ENST00000576348 PLEKHO1Q53GL0 409 aaPredicted RBP21.67■■□□□ 1.06
ERCC4-208ENST00000576348 GAS2L2Q8NHY3 880 aa21.67■■□□□ 1.06
ERCC4-208ENST00000576348 USP35Q9P2H5 1018 aa21.67■■□□□ 1.06
ERCC4-208ENST00000576348 CENPBP07199 599 aaPredicted RBP21.66■■□□□ 1.06
ERCC4-208ENST00000576348 RIPK4P57078 832 aa21.66■■□□□ 1.06
ERCC4-208ENST00000576348 LMOD3Q0VAK6 560 aa21.66■■□□□ 1.06
ERCC4-208ENST00000576348 UNC5CLQ8IV45 518 aa21.65■■□□□ 1.06
ERCC4-208ENST00000576348 NCAPD2Q15021 1401 aa21.64■■□□□ 1.06
ERCC4-208ENST00000576348 FAM208AQ9UK61 1670 aaKnown RBP21.64■■□□□ 1.05
ERCC4-208ENST00000576348 AMOTQ4VCS5 1084 aa21.64■■□□□ 1.05
ERCC4-208ENST00000576348 USP21Q9UK80 565 aa21.64■■□□□ 1.05
ERCC4-208ENST00000576348 SLIT2O94813 1529 aa21.63■■□□□ 1.05
ERCC4-208ENST00000576348 RGPD5Q99666 1765 aa21.63■■□□□ 1.05
ERCC4-208ENST00000576348 IL2RBP14784 551 aa21.62■■□□□ 1.05
ERCC4-208ENST00000576348 MTHFSDQ2M296 383 aaKnown RBP21.62■■□□□ 1.05
ERCC4-208ENST00000576348 NCBP3Q53F19 620 aaKnown RBP21.62■■□□□ 1.05
ERCC4-208ENST00000576348 FNBP4Q8N3X1 1017 aaPredicted RBP21.62■■□□□ 1.05
ERCC4-208ENST00000576348 SPG7Q9UQ90 795 aa21.62■■□□□ 1.05
ERCC4-208ENST00000576348 PLCH1Q4KWH8 1693 aa21.62■■□□□ 1.05
ERCC4-208ENST00000576348 AFF2P51816 1311 aa21.61■■□□□ 1.05
ERCC4-208ENST00000576348 ZNF530Q6P9A1 599 aaPredicted RBP21.61■■□□□ 1.05
ERCC4-208ENST00000576348 RTF1Q92541 710 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms