RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 AEBP1Q8IUX7 1158 aa18.26■□□□□ 0.51
ERCC4-207ENST00000575156 CDCA7LQ96GN5 454 aa18.26■□□□□ 0.51
ERCC4-207ENST00000575156 PRKAR2BP31323 418 aa18.26■□□□□ 0.51
ERCC4-207ENST00000575156 ZC3H6P61129 1189 aaKnown RBP18.26■□□□□ 0.51
ERCC4-207ENST00000575156 FCHSD2O94868 740 aa18.25■□□□□ 0.51
ERCC4-207ENST00000575156 LTV1Q96GA3 475 aaPredicted RBP18.25■□□□□ 0.51
ERCC4-207ENST00000575156 ZNF521Q96K83 1311 aa18.25■□□□□ 0.51
ERCC4-207ENST00000575156 LTN1O94822 1766 aa18.25■□□□□ 0.51
ERCC4-207ENST00000575156 KIF24Q5T7B8 1368 aa18.24■□□□□ 0.51
ERCC4-207ENST00000575156 IP6K1Q92551 441 aa18.24■□□□□ 0.51
ERCC4-207ENST00000575156 NHSL1Q5SYE7 1610 aa18.24■□□□□ 0.51
ERCC4-207ENST00000575156 ROBO1Q9Y6N7 1651 aa18.24■□□□□ 0.51
ERCC4-207ENST00000575156 ARHGEF10O15013 1369 aa18.24■□□□□ 0.51
ERCC4-207ENST00000575156 SULT6B1Q6IMI4 303 aa18.23■□□□□ 0.51
ERCC4-207ENST00000575156 PHACTR3Q96KR7 559 aa18.23■□□□□ 0.51
ERCC4-207ENST00000575156 RTL1A6NKG5 1358 aa18.23■□□□□ 0.51
ERCC4-207ENST00000575156 EYA1Q99502 592 aa18.22■□□□□ 0.51
ERCC4-207ENST00000575156 AXIN2Q9Y2T1 843 aa18.21■□□□□ 0.51
ERCC4-207ENST00000575156 MAPK8IP3Q9UPT6 1336 aa18.21■□□□□ 0.51
ERCC4-207ENST00000575156 PHRF1Q9P1Y6 1649 aaKnown RBP18.21■□□□□ 0.51
ERCC4-207ENST00000575156 RGPD1P0DJD0 1748 aa18.21■□□□□ 0.51
ERCC4-207ENST00000575156 PIP4K2BP78356 416 aa18.21■□□□□ 0.51
ERCC4-207ENST00000575156 TMPOP42166 694 aaKnown RBP18.2■□□□□ 0.5
ERCC4-207ENST00000575156 WWC1Q8IX03 1113 aa18.2■□□□□ 0.5
ERCC4-207ENST00000575156 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
ERCC4-207ENST00000575156 CRYBG1Q9Y4K1 1723 aa18.19■□□□□ 0.5
ERCC4-207ENST00000575156 IGSF1Q8N6C5 1336 aa18.19■□□□□ 0.5
ERCC4-207ENST00000575156 PDE3BQ13370 1112 aa18.18■□□□□ 0.5
ERCC4-207ENST00000575156 CHRNA2Q15822 529 aa18.18■□□□□ 0.5
ERCC4-207ENST00000575156 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
ERCC4-207ENST00000575156 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
ERCC4-207ENST00000575156 TOM1O60784 492 aa18.18■□□□□ 0.5
ERCC4-207ENST00000575156 USHBP1Q8N6Y0 703 aa18.18■□□□□ 0.5
ERCC4-207ENST00000575156 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
ERCC4-207ENST00000575156 UBAP1LF5GYI3 381 aa18.17■□□□□ 0.5
ERCC4-207ENST00000575156 GOLGA2Q08379 1002 aa18.17■□□□□ 0.5
ERCC4-207ENST00000575156 LRRC59Q96AG4 307 aaKnown RBP18.16■□□□□ 0.5
ERCC4-207ENST00000575156 TRIM35Q9UPQ4 493 aa18.16■□□□□ 0.5
ERCC4-207ENST00000575156 AHDC1Q5TGY3 1603 aaPredicted RBP18.16■□□□□ 0.5
ERCC4-207ENST00000575156 RIPK4P57078 832 aa18.16■□□□□ 0.5
ERCC4-207ENST00000575156 NBPF6Q5VWK0 638 aa18.16■□□□□ 0.5
ERCC4-207ENST00000575156 NGEFQ8N5V2 710 aa18.16■□□□□ 0.5
ERCC4-207ENST00000575156 NBPF4Q96M43 638 aa18.16■□□□□ 0.5
ERCC4-207ENST00000575156 KDRP35968 1356 aa18.15■□□□□ 0.5
ERCC4-207ENST00000575156 CCDC27Q2M243 656 aa18.14■□□□□ 0.5
ERCC4-207ENST00000575156 ANKRD24Q8TF21 1146 aa18.14■□□□□ 0.5
ERCC4-207ENST00000575156 GTF3C3Q9Y5Q9 886 aa18.14■□□□□ 0.5
ERCC4-207ENST00000575156 SLFN5Q08AF3 891 aa18.14■□□□□ 0.49
ERCC4-207ENST00000575156 NFE2L2Q16236 605 aa18.14■□□□□ 0.49
ERCC4-207ENST00000575156 NEFMP07197 916 aa18.13■□□□□ 0.49
ERCC4-207ENST00000575156 SUPT16HQ9Y5B9 1047 aaKnown RBP18.13■□□□□ 0.49
ERCC4-207ENST00000575156 CPDO75976 1380 aa18.13■□□□□ 0.49
ERCC4-207ENST00000575156 HAP1P54257 671 aaPredicted RBP18.13■□□□□ 0.49
ERCC4-207ENST00000575156 DUSP27Q5VZP5 1158 aa18.13■□□□□ 0.49
ERCC4-207ENST00000575156 CERKQ8TCT0 537 aa18.12■□□□□ 0.49
ERCC4-207ENST00000575156 RGPD5Q99666 1765 aa18.12■□□□□ 0.49
ERCC4-207ENST00000575156 COL18A1P39060 1754 aa18.11■□□□□ 0.49
ERCC4-207ENST00000575156 ERBB3P21860 1342 aa18.11■□□□□ 0.49
ERCC4-207ENST00000575156 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
ERCC4-207ENST00000575156 TRMT2AQ8IZ69 625 aaKnown RBP18.11■□□□□ 0.49
ERCC4-207ENST00000575156 ABCA3Q99758 1704 aa18.11■□□□□ 0.49
ERCC4-207ENST00000575156 RGPD2P0DJD1 1756 aa18.11■□□□□ 0.49
ERCC4-207ENST00000575156 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
ERCC4-207ENST00000575156 THUMPD2Q9BTF0 503 aaKnown RBP18.1■□□□□ 0.49
ERCC4-207ENST00000575156 E9PSI1 815 aa18.09■□□□□ 0.49
ERCC4-207ENST00000575156 WDR63Q8IWG1 891 aa18.09■□□□□ 0.49
ERCC4-207ENST00000575156 PHLPP1O60346 1717 aa18.08■□□□□ 0.49
ERCC4-207ENST00000575156 COL16A1Q07092 1604 aaPredicted RBP18.08■□□□□ 0.49
ERCC4-207ENST00000575156 FAM83GA6ND36 823 aa18.08■□□□□ 0.49
ERCC4-207ENST00000575156 MTHFSDQ2M296 383 aaKnown RBP18.08■□□□□ 0.49
ERCC4-207ENST00000575156 DCTN1Q14203 1278 aa18.07■□□□□ 0.48
ERCC4-207ENST00000575156 CAMTA1Q9Y6Y1 1673 aa18.06■□□□□ 0.48
ERCC4-207ENST00000575156 NLRP2Q9NX02 1062 aa18.05■□□□□ 0.48
ERCC4-207ENST00000575156 NCAPD2Q15021 1401 aa18.05■□□□□ 0.48
ERCC4-207ENST00000575156 CSB-PGBD3P0DP91 1061 aa18.05■□□□□ 0.48
ERCC4-207ENST00000575156 DLG5Q8TDM6 1919 aa18.04■□□□□ 0.48
ERCC4-207ENST00000575156 ABCC6O95255 1503 aa18.04■□□□□ 0.48
ERCC4-207ENST00000575156 TSR2Q969E8 191 aaKnown RBP18.03■□□□□ 0.48
ERCC4-207ENST00000575156 RCAN3Q9UKA8 241 aa18.03■□□□□ 0.48
ERCC4-207ENST00000575156 LMO7Q8WWI1 1683 aa18.03■□□□□ 0.48
ERCC4-207ENST00000575156 MCM10Q7L590 875 aa18.03■□□□□ 0.48
ERCC4-207ENST00000575156 COL22A1Q8NFW1 1626 aaPredicted RBP18.03■□□□□ 0.48
ERCC4-207ENST00000575156 IRX6P78412 446 aaPredicted RBP18.02■□□□□ 0.47
ERCC4-207ENST00000575156 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
ERCC4-207ENST00000575156 COL5A2P05997 1499 aaPredicted RBP18.01■□□□□ 0.47
ERCC4-207ENST00000575156 IL16Q14005 1332 aa18■□□□□ 0.47
ERCC4-207ENST00000575156 FANCIQ9NVI1 1328 aa18■□□□□ 0.47
ERCC4-207ENST00000575156 LMOD3Q0VAK6 560 aa18■□□□□ 0.47
ERCC4-207ENST00000575156 LAS1LQ9Y4W2 734 aaKnown RBP18■□□□□ 0.47
ERCC4-207ENST00000575156 STRN4Q9NRL3 753 aa18■□□□□ 0.47
ERCC4-207ENST00000575156 ADAMTS2O95450 1211 aa17.99■□□□□ 0.47
ERCC4-207ENST00000575156 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
ERCC4-207ENST00000575156 WDR17Q8IZU2 1322 aa17.99■□□□□ 0.47
ERCC4-207ENST00000575156 NUTM2BA6NNL0 878 aaPredicted RBP17.99■□□□□ 0.47
ERCC4-207ENST00000575156 NUTM2EB1AL46 878 aaPredicted RBP17.99■□□□□ 0.47
ERCC4-207ENST00000575156 FKBP8Q14318 412 aa17.99■□□□□ 0.47
ERCC4-207ENST00000575156 NUTM2AQ8IVF1 878 aaPredicted RBP17.99■□□□□ 0.47
ERCC4-207ENST00000575156 FAM208AQ9UK61 1670 aaKnown RBP17.98■□□□□ 0.47
ERCC4-207ENST00000575156 LARP1Q6PKG0 1096 aaKnown RBP17.98■□□□□ 0.47
ERCC4-207ENST00000575156 BTG4Q9NY30 223 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms