RNA–Protein interactions for RNA: ENST00000574194.1

ERCC4-205, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-205ENST00000574194 RFC5P40937 340 aa8.46□□□□□ -1.06
ERCC4-205ENST00000574194 CCDC116Q8IYX3 515 aa8.46□□□□□ -1.06
ERCC4-205ENST00000574194 WIPF1O43516 503 aa8.45□□□□□ -1.06
ERCC4-205ENST00000574194 MAN1A2O60476 641 aa8.45□□□□□ -1.06
ERCC4-205ENST00000574194 GMPRP36959 345 aa8.45□□□□□ -1.06
ERCC4-205ENST00000574194 CBLBQ13191 982 aa8.45□□□□□ -1.06
ERCC4-205ENST00000574194 PPP1R26Q5T8A7 1209 aaPredicted RBP8.45□□□□□ -1.06
ERCC4-205ENST00000574194 LINC00528Q8N1L1 170 aa8.45□□□□□ -1.06
ERCC4-205ENST00000574194 MEIOBQ8N635 442 aa8.45□□□□□ -1.06
ERCC4-205ENST00000574194 ERBB4Q15303 1308 aa8.45□□□□□ -1.06
ERCC4-205ENST00000574194 H3BM21 787 aa8.44□□□□□ -1.06
ERCC4-205ENST00000574194 UPP2O95045 317 aa8.44□□□□□ -1.06
ERCC4-205ENST00000574194 RAB15P59190 212 aa8.44□□□□□ -1.06
ERCC4-205ENST00000574194 SLC10A4Q96EP9 437 aa8.44□□□□□ -1.06
ERCC4-205ENST00000574194 KCTD15Q96SI1 283 aaPredicted RBP8.44□□□□□ -1.06
ERCC4-205ENST00000574194 ADAM32Q8TC27 787 aa8.43□□□□□ -1.06
ERCC4-205ENST00000574194 PCMTD1Q96MG8 357 aaPredicted RBP8.43□□□□□ -1.06
ERCC4-205ENST00000574194 EMILIN1Q9Y6C2 1016 aa8.43□□□□□ -1.06
ERCC4-205ENST00000574194 PTK2Q05397 1052 aa8.42□□□□□ -1.06
ERCC4-205ENST00000574194 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
ERCC4-205ENST00000574194 INSM1Q01101 510 aaPredicted RBP8.41□□□□□ -1.06
ERCC4-205ENST00000574194 IRF7Q92985 503 aa8.41□□□□□ -1.06
ERCC4-205ENST00000574194 AGBL1Q96MI9 1066 aa8.41□□□□□ -1.06
ERCC4-205ENST00000574194 DNMT3LQ9UJW3 386 aa8.41□□□□□ -1.06
ERCC4-205ENST00000574194 SOS2Q07890 1332 aaPredicted RBP8.4□□□□□ -1.06
ERCC4-205ENST00000574194 ZC3H4Q9UPT8 1303 aaKnown RBP8.4□□□□□ -1.06
ERCC4-205ENST00000574194 INTS6LQ5JSJ4 861 aaKnown RBP8.4□□□□□ -1.06
ERCC4-205ENST00000574194 TSEN34Q9BSV6 310 aaKnown RBP8.4□□□□□ -1.06
ERCC4-205ENST00000574194 PGPEP1Q9NXJ5 209 aa8.4□□□□□ -1.06
ERCC4-205ENST00000574194 TRIM34Q9BYJ4 488 aa8.39□□□□□ -1.07
ERCC4-205ENST00000574194 TMPRSS4Q9NRS4 437 aa8.39□□□□□ -1.07
ERCC4-205ENST00000574194 BRPF1P55201 1214 aaPredicted RBP8.38□□□□□ -1.07
ERCC4-205ENST00000574194 NPAS3Q8IXF0 933 aa8.38□□□□□ -1.07
ERCC4-205ENST00000574194 RELBQ01201 579 aa8.37□□□□□ -1.07
ERCC4-205ENST00000574194 DZIP3Q86Y13 1208 aaKnown RBP8.37□□□□□ -1.07
ERCC4-205ENST00000574194 STK17AQ9UEE5 414 aa8.37□□□□□ -1.07
ERCC4-205ENST00000574194 TTLL8A6PVC2 850 aa8.36□□□□□ -1.07
ERCC4-205ENST00000574194 PPFIA3O75145 1194 aa8.36□□□□□ -1.07
ERCC4-205ENST00000574194 Q6ZVU0 165 aa8.36□□□□□ -1.07
ERCC4-205ENST00000574194 PNMA1Q8ND90 353 aa8.36□□□□□ -1.07
ERCC4-205ENST00000574194 GOPCQ9HD26 462 aa8.36□□□□□ -1.07
ERCC4-205ENST00000574194 CDV3Q9UKY7 258 aaKnown RBP8.36□□□□□ -1.07
ERCC4-205ENST00000574194 GPSM3Q9Y4H4 160 aa8.36□□□□□ -1.07
ERCC4-205ENST00000574194 TMEM259Q4ZIN3 620 aa8.35□□□□□ -1.07
ERCC4-205ENST00000574194 ZNF395Q9H8N7 513 aaPredicted RBP8.35□□□□□ -1.07
ERCC4-205ENST00000574194 ERVH48-1M5A8F1 160 aa8.34□□□□□ -1.07
ERCC4-205ENST00000574194 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
ERCC4-205ENST00000574194 DHX9Q08211 1270 aaKnown RBP8.34□□□□□ -1.07
ERCC4-205ENST00000574194 TPRNQ4KMQ1 711 aa8.34□□□□□ -1.07
ERCC4-205ENST00000574194 ZNF784Q8NCA9 323 aaPredicted RBP8.34□□□□□ -1.07
ERCC4-205ENST00000574194 INSM2Q96T92 566 aaPredicted RBP8.34□□□□□ -1.07
ERCC4-205ENST00000574194 SPINT1O43278 529 aa8.33□□□□□ -1.08
ERCC4-205ENST00000574194 CTSOP43234 321 aaPredicted RBP8.33□□□□□ -1.08
ERCC4-205ENST00000574194 GJD4Q96KN9 370 aaPredicted RBP8.33□□□□□ -1.08
ERCC4-205ENST00000574194 ADD1P35611 737 aaKnown RBP8.32□□□□□ -1.08
ERCC4-205ENST00000574194 PTSQ03393 145 aa8.32□□□□□ -1.08
ERCC4-205ENST00000574194 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.32□□□□□ -1.08
ERCC4-205ENST00000574194 NBPF20Q3BBV1 942 aa8.32□□□□□ -1.08
ERCC4-205ENST00000574194 ZSCAN1Q8NBB4 408 aa8.32□□□□□ -1.08
ERCC4-205ENST00000574194 PCDHB9Q9Y5E1 797 aa8.32□□□□□ -1.08
ERCC4-205ENST00000574194 CYLDQ9NQC7 956 aa8.31□□□□□ -1.08
ERCC4-205ENST00000574194 LILRA1O75019 489 aa8.3□□□□□ -1.08
ERCC4-205ENST00000574194 GIGYF1O75420 1035 aaPredicted RBP8.3□□□□□ -1.08
ERCC4-205ENST00000574194 FBXO45P0C2W1 286 aa8.3□□□□□ -1.08
ERCC4-205ENST00000574194 GPR161Q8N6U8 529 aaKnown RBP8.3□□□□□ -1.08
ERCC4-205ENST00000574194 POLMQ9NP87 494 aaPredicted RBP8.3□□□□□ -1.08
ERCC4-205ENST00000574194 ESPNB1AK53 854 aa8.29□□□□□ -1.08
ERCC4-205ENST00000574194 VSIG8P0DPA2 414 aa8.29□□□□□ -1.08
ERCC4-205ENST00000574194 ZBBXA8MT70 800 aa8.28□□□□□ -1.08
ERCC4-205ENST00000574194 KDF1Q8NAX2 398 aaPredicted RBP8.28□□□□□ -1.08
ERCC4-205ENST00000574194 SNRKQ9NRH2 765 aa8.28□□□□□ -1.08
ERCC4-205ENST00000574194 ADH1AP07327 375 aa8.27□□□□□ -1.09
ERCC4-205ENST00000574194 CCDC155Q8N6L0 562 aa8.27□□□□□ -1.09
ERCC4-205ENST00000574194 PTGIRP43119 386 aa8.26□□□□□ -1.09
ERCC4-205ENST00000574194 MTMR14Q8NCE2 650 aa8.25□□□□□ -1.09
ERCC4-205ENST00000574194 RNF217Q8TC41 542 aa8.25□□□□□ -1.09
ERCC4-205ENST00000574194 SLC35F4A4IF30 521 aa8.24□□□□□ -1.09
ERCC4-205ENST00000574194 KRT76Q01546 638 aa8.24□□□□□ -1.09
ERCC4-205ENST00000574194 FOXD4L5Q5VV16 416 aaPredicted RBP8.24□□□□□ -1.09
ERCC4-205ENST00000574194 CNTNAP3BQ96NU0 1288 aa8.24□□□□□ -1.09
ERCC4-205ENST00000574194 CNTNAP3Q9BZ76 1288 aa8.24□□□□□ -1.09
ERCC4-205ENST00000574194 CDC14CA4D256 554 aa8.23□□□□□ -1.09
ERCC4-205ENST00000574194 FAM181BA6NEQ2 426 aa8.23□□□□□ -1.09
ERCC4-205ENST00000574194 GPR37L1O60883 481 aa8.23□□□□□ -1.09
ERCC4-205ENST00000574194 VWA5B2Q8N398 1253 aa8.23□□□□□ -1.09
ERCC4-205ENST00000574194 RHOQP17081 205 aa8.22□□□□□ -1.09
ERCC4-205ENST00000574194 NR1H3Q13133 447 aa8.22□□□□□ -1.09
ERCC4-205ENST00000574194 SENP3-EIF4A1A0A087X0R7 540 aa8.21□□□□□ -1.1
ERCC4-205ENST00000574194 MEN1O00255 615 aa8.21□□□□□ -1.1
ERCC4-205ENST00000574194 ITGA6P23229 1130 aa8.21□□□□□ -1.1
ERCC4-205ENST00000574194 RNFT1Q5M7Z0 435 aa8.21□□□□□ -1.1
ERCC4-205ENST00000574194 PRICKLE2Q7Z3G6 844 aa8.21□□□□□ -1.1
ERCC4-205ENST00000574194 SEPT12Q8IYM1 358 aa8.21□□□□□ -1.1
ERCC4-205ENST00000574194 BANK1Q8NDB2 785 aa8.21□□□□□ -1.1
ERCC4-205ENST00000574194 COL25A1Q9BXS0 654 aaPredicted RBP8.21□□□□□ -1.1
ERCC4-205ENST00000574194 SCTRP47872 440 aa8.2□□□□□ -1.1
ERCC4-205ENST00000574194 PCDHB11Q9Y5F2 797 aa8.2□□□□□ -1.1
ERCC4-205ENST00000574194 NDUFB9Q9Y6M9 179 aa8.2□□□□□ -1.1
ERCC4-205ENST00000574194 ATP5J2-PTCD1G3V325 749 aa8.19□□□□□ -1.1
ERCC4-205ENST00000574194 LYSMD3Q7Z3D4 306 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms