RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
NDE1-208ENST00000573694 TERF2IPQ9NYB0 399 aa12.98□□□□□ -0.33
NDE1-208ENST00000573694 ABCC6O95255 1503 aa12.98□□□□□ -0.33
NDE1-208ENST00000573694 AKAP12Q02952 1782 aa12.97□□□□□ -0.33
NDE1-208ENST00000573694 SRCAPQ6ZRS2 3230 aa12.97□□□□□ -0.33
NDE1-208ENST00000573694 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
NDE1-208ENST00000573694 ZC3H6P61129 1189 aaKnown RBP12.97□□□□□ -0.33
NDE1-208ENST00000573694 TMC1Q8TDI8 760 aa12.97□□□□□ -0.33
NDE1-208ENST00000573694 CARD14Q9BXL6 1004 aa12.97□□□□□ -0.33
NDE1-208ENST00000573694 SLC12A5Q9H2X9 1139 aa12.97□□□□□ -0.33
NDE1-208ENST00000573694 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
NDE1-208ENST00000573694 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
NDE1-208ENST00000573694 USP31Q70CQ4 1352 aa12.96□□□□□ -0.33
NDE1-208ENST00000573694 HDGFL2Q7Z4V5 671 aaPredicted RBP12.96□□□□□ -0.33
NDE1-208ENST00000573694 SLIT3O75094 1523 aa12.96□□□□□ -0.33
NDE1-208ENST00000573694 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.34
NDE1-208ENST00000573694 ANKRD36BQ8N2N9 1353 aa12.95□□□□□ -0.34
NDE1-208ENST00000573694 PHRF1Q9P1Y6 1649 aaKnown RBP12.95□□□□□ -0.34
NDE1-208ENST00000573694 NPC1L1Q9UHC9 1359 aa12.95□□□□□ -0.34
NDE1-208ENST00000573694 A0A0G2JS52 829 aa12.95□□□□□ -0.34
NDE1-208ENST00000573694 MYT1Q01538 1121 aa12.95□□□□□ -0.34
NDE1-208ENST00000573694 PDE3BQ13370 1112 aa12.95□□□□□ -0.34
NDE1-208ENST00000573694 ARHGEF25Q86VW2 580 aa12.95□□□□□ -0.34
NDE1-208ENST00000573694 FAM9BQ8IZU0 186 aa12.95□□□□□ -0.34
NDE1-208ENST00000573694 THSD7AQ9UPZ6 1657 aa12.95□□□□□ -0.34
NDE1-208ENST00000573694 BRWD3Q6RI45 1802 aa12.94□□□□□ -0.34
NDE1-208ENST00000573694 BCL9O00512 1426 aa12.94□□□□□ -0.34
NDE1-208ENST00000573694 CRB1P82279 1406 aa12.94□□□□□ -0.34
NDE1-208ENST00000573694 NRKQ7Z2Y5 1582 aa12.94□□□□□ -0.34
NDE1-208ENST00000573694 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
NDE1-208ENST00000573694 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
NDE1-208ENST00000573694 CAMTA1Q9Y6Y1 1673 aa12.93□□□□□ -0.34
NDE1-208ENST00000573694 CHRNA2Q15822 529 aa12.93□□□□□ -0.34
NDE1-208ENST00000573694 WDR17Q8IZU2 1322 aa12.92□□□□□ -0.34
NDE1-208ENST00000573694 NUTM2GQ5VZR2 741 aa12.92□□□□□ -0.34
NDE1-208ENST00000573694 STRN4Q9NRL3 753 aa12.92□□□□□ -0.34
NDE1-208ENST00000573694 COL5A2P05997 1499 aaPredicted RBP12.91□□□□□ -0.34
NDE1-208ENST00000573694 EDC4Q6P2E9 1401 aaKnown RBP12.91□□□□□ -0.34
NDE1-208ENST00000573694 HNRNPUQ00839 825 aaKnown RBP eCLIP12.91□□□□□ -0.34
NDE1-208ENST00000573694 LARP1Q6PKG0 1096 aaKnown RBP12.91□□□□□ -0.34
NDE1-208ENST00000573694 CARD10Q9BWT7 1032 aa12.91□□□□□ -0.34
NDE1-208ENST00000573694 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
NDE1-208ENST00000573694 PPP2R1AP30153 589 aa12.9□□□□□ -0.34
NDE1-208ENST00000573694 RGPD1P0DJD0 1748 aa12.89□□□□□ -0.35
NDE1-208ENST00000573694 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
NDE1-208ENST00000573694 PLSCR1O15162 318 aa12.88□□□□□ -0.35
NDE1-208ENST00000573694 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
NDE1-208ENST00000573694 TOM1L2Q6ZVM7 507 aa12.88□□□□□ -0.35
NDE1-208ENST00000573694 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
NDE1-208ENST00000573694 DDB1Q16531 1140 aa12.87□□□□□ -0.35
NDE1-208ENST00000573694 DEFB132Q7Z7B7 95 aa12.87□□□□□ -0.35
NDE1-208ENST00000573694 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
NDE1-208ENST00000573694 OVOS2A0A0G2JMS6 1433 aa12.86□□□□□ -0.35
NDE1-208ENST00000573694 OVOS2A0A0J9YW53 1432 aa12.86□□□□□ -0.35
NDE1-208ENST00000573694 OVOS2Q6IE36 1432 aa12.86□□□□□ -0.35
NDE1-208ENST00000573694 PIK3C2AO00443 1686 aa12.86□□□□□ -0.35
NDE1-208ENST00000573694 CGNL1Q0VF96 1302 aa12.86□□□□□ -0.35
NDE1-208ENST00000573694 PARP4Q9UKK3 1724 aaKnown RBP12.85□□□□□ -0.35
NDE1-208ENST00000573694 NSD2O96028 1365 aa12.85□□□□□ -0.35
NDE1-208ENST00000573694 COL18A1P39060 1754 aa12.85□□□□□ -0.35
NDE1-208ENST00000573694 EXOC5O00471 708 aa12.85□□□□□ -0.35
NDE1-208ENST00000573694 NBPF14Q5TI25 921 aa12.85□□□□□ -0.35
NDE1-208ENST00000573694 USP35Q9P2H5 1018 aa12.85□□□□□ -0.35
NDE1-208ENST00000573694 APBA3O96018 575 aa12.84□□□□□ -0.35
NDE1-208ENST00000573694 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
NDE1-208ENST00000573694 AXIN2Q9Y2T1 843 aa12.84□□□□□ -0.35
NDE1-208ENST00000573694 NFAT5O94916 1531 aa12.83□□□□□ -0.35
NDE1-208ENST00000573694 KIF24Q5T7B8 1368 aa12.83□□□□□ -0.36
NDE1-208ENST00000573694 SENP3-EIF4A1A0A087X0R7 540 aa12.83□□□□□ -0.36
NDE1-208ENST00000573694 TRIM37O94972 964 aa12.83□□□□□ -0.36
NDE1-208ENST00000573694 MORC1Q86VD1 984 aa12.83□□□□□ -0.36
NDE1-208ENST00000573694 LRP5O75197 1615 aa12.82□□□□□ -0.36
NDE1-208ENST00000573694 CSB-PGBD3P0DP91 1061 aa12.82□□□□□ -0.36
NDE1-208ENST00000573694 EN1Q05925 392 aaPredicted RBP12.82□□□□□ -0.36
NDE1-208ENST00000573694 IP6K1Q92551 441 aa12.82□□□□□ -0.36
NDE1-208ENST00000573694 COG3Q96JB2 828 aa12.82□□□□□ -0.36
NDE1-208ENST00000573694 ERBB3P21860 1342 aa12.82□□□□□ -0.36
NDE1-208ENST00000573694 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
NDE1-208ENST00000573694 MAP2P11137 1827 aaKnown RBP12.81□□□□□ -0.36
NDE1-208ENST00000573694 TNNT2P45379 298 aaPredicted RBP12.81□□□□□ -0.36
NDE1-208ENST00000573694 GTF3C3Q9Y5Q9 886 aa12.81□□□□□ -0.36
NDE1-208ENST00000573694 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.8□□□□□ -0.36
NDE1-208ENST00000573694 GGNBP2Q9H3C7 697 aa12.8□□□□□ -0.36
NDE1-208ENST00000573694 IL2RBP14784 551 aa12.79□□□□□ -0.36
NDE1-208ENST00000573694 NME9Q86XW9 330 aa12.79□□□□□ -0.36
NDE1-208ENST00000573694 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
NDE1-208ENST00000573694 INSRP06213 1382 aa12.79□□□□□ -0.36
NDE1-208ENST00000573694 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
NDE1-208ENST00000573694 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
NDE1-208ENST00000573694 COL3A1P02461 1466 aaPredicted RBP12.78□□□□□ -0.36
NDE1-208ENST00000573694 FYB1O15117 783 aa12.78□□□□□ -0.36
NDE1-208ENST00000573694 EZH2Q15910 746 aaKnown RBP12.78□□□□□ -0.36
NDE1-208ENST00000573694 TNS1Q9HBL0 1735 aaKnown RBP12.77□□□□□ -0.36
NDE1-208ENST00000573694 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
NDE1-208ENST00000573694 WDR43Q15061 677 aaKnown RBP eCLIP12.76□□□□□ -0.37
NDE1-208ENST00000573694 FAM182BQ5T319 152 aa12.76□□□□□ -0.37
NDE1-208ENST00000573694 MARCH10Q8NA82 808 aaPredicted RBP12.76□□□□□ -0.37
NDE1-208ENST00000573694 ANKRD24Q8TF21 1146 aa12.76□□□□□ -0.37
NDE1-208ENST00000573694 NLRP2Q9NX02 1062 aa12.76□□□□□ -0.37
NDE1-208ENST00000573694 PEAK1Q9H792 1746 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms