RNA–Protein interactions for RNA: ENST00000573692.1

SRRM2-217, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-217ENST00000573692 COL18A1P39060 1754 aa23.43■■□□□ 1.34
SRRM2-217ENST00000573692 RGPD5Q99666 1765 aa23.43■■□□□ 1.34
SRRM2-217ENST00000573692 HOXC9P31274 260 aa23.43■■□□□ 1.34
SRRM2-217ENST00000573692 IP6K1Q92551 441 aa23.43■■□□□ 1.34
SRRM2-217ENST00000573692 C8orf37Q96NL8 207 aa23.42■■□□□ 1.34
SRRM2-217ENST00000573692 MIER1Q8N108 512 aa23.41■■□□□ 1.34
SRRM2-217ENST00000573692 CFAP53Q96M91 514 aa23.41■■□□□ 1.34
SRRM2-217ENST00000573692 CDK12Q9NYV4 1490 aaPredicted RBP23.41■■□□□ 1.34
SRRM2-217ENST00000573692 ABCC6O95255 1503 aa23.4■■□□□ 1.34
SRRM2-217ENST00000573692 HSP90AB2PQ58FF8 381 aa23.4■■□□□ 1.34
SRRM2-217ENST00000573692 NGLY1Q96IV0 654 aa23.4■■□□□ 1.34
SRRM2-217ENST00000573692 PLCH1Q4KWH8 1693 aa23.4■■□□□ 1.34
SRRM2-217ENST00000573692 LMO7Q8WWI1 1683 aa23.4■■□□□ 1.34
SRRM2-217ENST00000573692 AXIN2Q9Y2T1 843 aa23.39■■□□□ 1.33
SRRM2-217ENST00000573692 LTV1Q96GA3 475 aaPredicted RBP23.38■■□□□ 1.33
SRRM2-217ENST00000573692 BTG4Q9NY30 223 aa23.38■■□□□ 1.33
SRRM2-217ENST00000573692 BLMP54132 1417 aaPredicted RBP23.38■■□□□ 1.33
SRRM2-217ENST00000573692 INSRP06213 1382 aa23.38■■□□□ 1.33
SRRM2-217ENST00000573692 CAMTA1Q9Y6Y1 1673 aa23.38■■□□□ 1.33
SRRM2-217ENST00000573692 EVA1CP58658 441 aa23.35■■□□□ 1.33
SRRM2-217ENST00000573692 ANKRD24Q8TF21 1146 aa23.35■■□□□ 1.33
SRRM2-217ENST00000573692 NWD2Q9ULI1 1742 aa23.35■■□□□ 1.33
SRRM2-217ENST00000573692 ILDR2Q71H61 639 aa23.34■■□□□ 1.33
SRRM2-217ENST00000573692 STRN4Q9NRL3 753 aa23.34■■□□□ 1.33
SRRM2-217ENST00000573692 COL3A1P02461 1466 aaPredicted RBP23.33■■□□□ 1.33
SRRM2-217ENST00000573692 DIAPH1O60610 1272 aaKnown RBP23.33■■□□□ 1.33
SRRM2-217ENST00000573692 CSB-PGBD3P0DP91 1061 aa23.33■■□□□ 1.33
SRRM2-217ENST00000573692 EIF4A2Q14240 407 aaKnown RBP23.33■■□□□ 1.33
SRRM2-217ENST00000573692 CCDC184Q52MB2 194 aa23.33■■□□□ 1.33
SRRM2-217ENST00000573692 MRS2Q9HD23 443 aa23.33■■□□□ 1.33
SRRM2-217ENST00000573692 SLIT2O94813 1529 aa23.33■■□□□ 1.32
SRRM2-217ENST00000573692 COL5A2P05997 1499 aaPredicted RBP23.32■■□□□ 1.32
SRRM2-217ENST00000573692 NRAPQ86VF7 1730 aa23.31■■□□□ 1.32
SRRM2-217ENST00000573692 FNBP4Q8N3X1 1017 aaPredicted RBP23.31■■□□□ 1.32
SRRM2-217ENST00000573692 ERBB3P21860 1342 aa23.31■■□□□ 1.32
SRRM2-217ENST00000573692 AFF2P51816 1311 aa23.31■■□□□ 1.32
SRRM2-217ENST00000573692 CCER2I3L3R5 266 aa23.3■■□□□ 1.32
SRRM2-217ENST00000573692 USP21Q9UK80 565 aa23.3■■□□□ 1.32
SRRM2-217ENST00000573692 IL13P35225 146 aa23.29■■□□□ 1.32
SRRM2-217ENST00000573692 NUDCQ9Y266 331 aa23.29■■□□□ 1.32
SRRM2-217ENST00000573692 RGPD2P0DJD1 1756 aa23.29■■□□□ 1.32
SRRM2-217ENST00000573692 FAM208AQ9UK61 1670 aaKnown RBP23.28■■□□□ 1.32
SRRM2-217ENST00000573692 UNC5CLQ8IV45 518 aa23.28■■□□□ 1.32
SRRM2-217ENST00000573692 WDR17Q8IZU2 1322 aa23.28■■□□□ 1.32
SRRM2-217ENST00000573692 U2SURPO15042 1029 aaKnown RBP23.27■■□□□ 1.32
SRRM2-217ENST00000573692 LARP1Q6PKG0 1096 aaKnown RBP23.27■■□□□ 1.32
SRRM2-217ENST00000573692 TOM1L2Q6ZVM7 507 aa23.27■■□□□ 1.32
SRRM2-217ENST00000573692 NLRP2Q9NX02 1062 aa23.27■■□□□ 1.32
SRRM2-217ENST00000573692 BCL9LQ86UU0 1499 aa23.26■■□□□ 1.31
SRRM2-217ENST00000573692 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.26■■□□□ 1.31
SRRM2-217ENST00000573692 SOCS7O14512 581 aa23.25■■□□□ 1.31
SRRM2-217ENST00000573692 NBPF6Q5VWK0 638 aa23.24■■□□□ 1.31
SRRM2-217ENST00000573692 NBPF4Q96M43 638 aa23.24■■□□□ 1.31
SRRM2-217ENST00000573692 EYA1Q99502 592 aa23.24■■□□□ 1.31
SRRM2-217ENST00000573692 CCDC9Q9Y3X0 531 aaKnown RBP23.24■■□□□ 1.31
SRRM2-217ENST00000573692 CRB1P82279 1406 aa23.24■■□□□ 1.31
SRRM2-217ENST00000573692 WDR43Q15061 677 aaKnown RBP eCLIP23.23■■□□□ 1.319e-7■■□□□ 12.9
SRRM2-217ENST00000573692 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
SRRM2-217ENST00000573692 U2AF1L5P0DN76 240 aaPredicted RBP23.22■■□□□ 1.31
SRRM2-217ENST00000573692 U2AF1Q01081 240 aaKnown RBP eCLIP23.22■■□□□ 1.311e-10■□□□□ 8.4
SRRM2-217ENST00000573692 USHBP1Q8N6Y0 703 aa23.22■■□□□ 1.31
SRRM2-217ENST00000573692 VPS72Q15906 364 aa23.21■■□□□ 1.31
SRRM2-217ENST00000573692 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
SRRM2-217ENST00000573692 CARD10Q9BWT7 1032 aa23.21■■□□□ 1.31
SRRM2-217ENST00000573692 USP35Q9P2H5 1018 aa23.21■■□□□ 1.31
SRRM2-217ENST00000573692 IGSF1Q8N6C5 1336 aa23.2■■□□□ 1.3
SRRM2-217ENST00000573692 ZNF772Q68DY9 489 aaPredicted RBP23.2■■□□□ 1.3
SRRM2-217ENST00000573692 HMOX1P09601 288 aa23.19■■□□□ 1.3
SRRM2-217ENST00000573692 SULT6B1Q6IMI4 303 aa23.19■■□□□ 1.3
SRRM2-217ENST00000573692 PNISRQ8TF01 805 aaKnown RBP23.19■■□□□ 1.3
SRRM2-217ENST00000573692 TRPC5Q9UL62 973 aaPredicted RBP23.19■■□□□ 1.3
SRRM2-217ENST00000573692 QTRT2Q9H974 415 aaKnown RBP23.18■■□□□ 1.3
SRRM2-217ENST00000573692 SPATA31A1Q5TZJ5 1347 aa23.17■■□□□ 1.3
SRRM2-217ENST00000573692 SPATA31A5Q5VU36 1347 aa23.17■■□□□ 1.3
SRRM2-217ENST00000573692 SPATA31A7Q8IWB4 1347 aa23.17■■□□□ 1.3
SRRM2-217ENST00000573692 AEBP1Q8IUX7 1158 aa23.17■■□□□ 1.3
SRRM2-217ENST00000573692 ATRNO75882 1429 aa23.16■■□□□ 1.3
SRRM2-217ENST00000573692 FAM9BQ8IZU0 186 aa23.16■■□□□ 1.3
SRRM2-217ENST00000573692 TCP11L2Q8N4U5 519 aa23.15■■□□□ 1.3
SRRM2-217ENST00000573692 ADAMTS8Q9UP79 889 aa23.15■■□□□ 1.3
SRRM2-217ENST00000573692 NCAPD2Q15021 1401 aa23.14■■□□□ 1.29
SRRM2-217ENST00000573692 GJD4Q96KN9 370 aaPredicted RBP23.13■■□□□ 1.29
SRRM2-217ENST00000573692 FCHSD2O94868 740 aa23.12■■□□□ 1.29
SRRM2-217ENST00000573692 RAPGEF4Q8WZA2 1011 aa23.12■■□□□ 1.29
SRRM2-217ENST00000573692 THRAP3Q9Y2W1 955 aaKnown RBP23.12■■□□□ 1.29
SRRM2-217ENST00000573692 KDRP35968 1356 aa23.12■■□□□ 1.29
SRRM2-217ENST00000573692 WNK3Q9BYP7 1800 aa23.11■■□□□ 1.29
SRRM2-217ENST00000573692 RSPH6AQ9H0K4 717 aa23.11■■□□□ 1.29
SRRM2-217ENST00000573692 RGS17Q9UGC6 210 aaPredicted RBP23.11■■□□□ 1.29
SRRM2-217ENST00000573692 GLI3P10071 1580 aa23.1■■□□□ 1.29
SRRM2-217ENST00000573692 IL2RBP14784 551 aa23.1■■□□□ 1.29
SRRM2-217ENST00000573692 TATP17735 454 aaPredicted RBP23.1■■□□□ 1.29
SRRM2-217ENST00000573692 PRKAR2BP31323 418 aa23.1■■□□□ 1.29
SRRM2-217ENST00000573692 PNNQ9H307 717 aaKnown RBP23.1■■□□□ 1.29
SRRM2-217ENST00000573692 PARP4Q9UKK3 1724 aaKnown RBP23.09■■□□□ 1.29
SRRM2-217ENST00000573692 FAM98CQ17RN3 349 aaKnown RBP23.09■■□□□ 1.29
SRRM2-217ENST00000573692 BARGINQ6ZT62 677 aa23.08■■□□□ 1.29
SRRM2-217ENST00000573692 CCDC146Q8IYE0 955 aa23.08■■□□□ 1.29
SRRM2-217ENST00000573692 MEGF6O75095 1541 aa23.08■■□□□ 1.28
SRRM2-217ENST00000573692 NEFMP07197 916 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 246.6 ms