RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 PLPP7Q8NBV4 271 aa11.08□□□□□ -0.64
TOM1L1-216ENST00000573607 EMID1Q96A84 441 aaPredicted RBP11.08□□□□□ -0.64
TOM1L1-216ENST00000573607 CCDC85AQ96PX6 553 aaPredicted RBP11.08□□□□□ -0.64
TOM1L1-216ENST00000573607 TRAIPQ9BWF2 469 aa11.08□□□□□ -0.64
TOM1L1-216ENST00000573607 VRTNQ9H8Y1 702 aa11.08□□□□□ -0.64
TOM1L1-216ENST00000573607 NCOA4Q13772 614 aa11.07□□□□□ -0.64
TOM1L1-216ENST00000573607 LIAT1Q6ZQX7 453 aa11.06□□□□□ -0.64
TOM1L1-216ENST00000573607 PLEKHM2Q8IWE5 1019 aa11.06□□□□□ -0.64
TOM1L1-216ENST00000573607 ZNF592Q92610 1267 aa11.06□□□□□ -0.64
TOM1L1-216ENST00000573607 SLC10A4Q96EP9 437 aa11.06□□□□□ -0.64
TOM1L1-216ENST00000573607 CHIC2Q9UKJ5 165 aa11.06□□□□□ -0.64
TOM1L1-216ENST00000573607 ATG7O95352 703 aa11.05□□□□□ -0.64
TOM1L1-216ENST00000573607 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
TOM1L1-216ENST00000573607 MKRN1Q9UHC7 482 aaKnown RBP11.05□□□□□ -0.64
TOM1L1-216ENST00000573607 CSB-PGBD3P0DP91 1061 aa11.03□□□□□ -0.64
TOM1L1-216ENST00000573607 RPIAP49247 311 aa11.03□□□□□ -0.64
TOM1L1-216ENST00000573607 TRMT44Q8IYL2 757 aaKnown RBP11.03□□□□□ -0.64
TOM1L1-216ENST00000573607 CDCA7Q9BWT1 371 aaPredicted RBP11.03□□□□□ -0.64
TOM1L1-216ENST00000573607 WNT7BP56706 349 aa11.02□□□□□ -0.65
TOM1L1-216ENST00000573607 RAB15P59190 212 aa11.02□□□□□ -0.65
TOM1L1-216ENST00000573607 CRTC2Q53ET0 693 aaPredicted RBP11.02□□□□□ -0.65
TOM1L1-216ENST00000573607 ESPNB1AK53 854 aa11.01□□□□□ -0.65
TOM1L1-216ENST00000573607 OXLD1Q5BKU9 147 aa11.01□□□□□ -0.65
TOM1L1-216ENST00000573607 ZMIZ1Q9ULJ6 1067 aa11.01□□□□□ -0.65
TOM1L1-216ENST00000573607 DOLKQ9UPQ8 538 aa11.01□□□□□ -0.65
TOM1L1-216ENST00000573607 VARSP26640 1264 aaKnown RBP11□□□□□ -0.65
TOM1L1-216ENST00000573607 MAP7D1Q3KQU3 841 aa11□□□□□ -0.65
TOM1L1-216ENST00000573607 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
TOM1L1-216ENST00000573607 EHBP1Q8NDI1 1231 aa11□□□□□ -0.65
TOM1L1-216ENST00000573607 TMEM88BA6NKF7 163 aa10.99□□□□□ -0.65
TOM1L1-216ENST00000573607 CD2BP2O95400 341 aaKnown RBP10.99□□□□□ -0.65
TOM1L1-216ENST00000573607 EML3Q32P44 896 aa10.99□□□□□ -0.65
TOM1L1-216ENST00000573607 NBPF20Q3BBV1 942 aa10.99□□□□□ -0.65
TOM1L1-216ENST00000573607 AEBP1Q8IUX7 1158 aa10.99□□□□□ -0.65
TOM1L1-216ENST00000573607 STK32AQ8WU08 396 aa10.99□□□□□ -0.65
TOM1L1-216ENST00000573607 KCTD15Q96SI1 283 aaPredicted RBP10.99□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L15C9J2P7 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L10C9JJH3 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L13C9JLJ4 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L12C9JPN9 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L11C9JVI0 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L21D6R901 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L18D6R9N7 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L22D6RA61 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L17D6RBQ6 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L19D6RCP7 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L20D6RJB6 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 RASA1P20936 1047 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 USP17L24Q0WX57 530 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 ARID5BQ14865 1188 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 NOVA2Q9UNW9 492 aaKnown RBP10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 PCDHB11Q9Y5F2 797 aa10.98□□□□□ -0.65
TOM1L1-216ENST00000573607 PTK7Q13308 1070 aa10.97□□□□□ -0.65
TOM1L1-216ENST00000573607 RNF20Q5VTR2 975 aa10.97□□□□□ -0.65
TOM1L1-216ENST00000573607 VASH1Q7L8A9 365 aaPredicted RBP10.97□□□□□ -0.65
TOM1L1-216ENST00000573607 USTQ9Y2C2 406 aa10.97□□□□□ -0.65
TOM1L1-216ENST00000573607 TLL2Q9Y6L7 1015 aa10.97□□□□□ -0.65
TOM1L1-216ENST00000573607 ATP5J2-PTCD1G3V325 749 aa10.96□□□□□ -0.65
TOM1L1-216ENST00000573607 LZTS3O60299 673 aaPredicted RBP10.96□□□□□ -0.65
TOM1L1-216ENST00000573607 CLDN10P78369 228 aa10.96□□□□□ -0.65
TOM1L1-216ENST00000573607 INTS6LQ5JSJ4 861 aaKnown RBP10.96□□□□□ -0.65
TOM1L1-216ENST00000573607 TMEM164Q5U3C3 297 aa10.96□□□□□ -0.65
TOM1L1-216ENST00000573607 PODXL2Q9NZ53 605 aa10.96□□□□□ -0.65
TOM1L1-216ENST00000573607 CDV3Q9UKY7 258 aaKnown RBP10.96□□□□□ -0.65
TOM1L1-216ENST00000573607 FAM196BA6NMK8 535 aa10.95□□□□□ -0.66
TOM1L1-216ENST00000573607 SLC19A1P41440 591 aa10.95□□□□□ -0.66
TOM1L1-216ENST00000573607 ELOAQ14241 798 aaKnown RBP10.95□□□□□ -0.66
TOM1L1-216ENST00000573607 LARP1Q6PKG0 1096 aaKnown RBP10.95□□□□□ -0.66
TOM1L1-216ENST00000573607 OGFOD1Q8N543 542 aa10.95□□□□□ -0.66
TOM1L1-216ENST00000573607 KIAA1024Q9UPX6 916 aa10.95□□□□□ -0.66
TOM1L1-216ENST00000573607 NOD1Q9Y239 953 aa10.95□□□□□ -0.66
TOM1L1-216ENST00000573607 SIAH2O43255 324 aa10.94□□□□□ -0.66
TOM1L1-216ENST00000573607 IFFO2Q5TF58 517 aa10.94□□□□□ -0.66
TOM1L1-216ENST00000573607 ZNF594Q96JF6 807 aaPredicted RBP10.94□□□□□ -0.66
TOM1L1-216ENST00000573607 MAP4K5Q9Y4K4 846 aa10.94□□□□□ -0.66
TOM1L1-216ENST00000573607 ERVH48-1M5A8F1 160 aa10.93□□□□□ -0.66
TOM1L1-216ENST00000573607 ZBTB7BO15156 539 aaPredicted RBP10.93□□□□□ -0.66
TOM1L1-216ENST00000573607 SEPT12Q8IYM1 358 aa10.93□□□□□ -0.66
TOM1L1-216ENST00000573607 GRM5P41594 1212 aa10.92□□□□□ -0.66
TOM1L1-216ENST00000573607 SCTRP47872 440 aa10.92□□□□□ -0.66
TOM1L1-216ENST00000573607 GTF2IP78347 998 aa10.92□□□□□ -0.66
TOM1L1-216ENST00000573607 PDE4CQ08493 712 aa10.92□□□□□ -0.66
TOM1L1-216ENST00000573607 MRGPRX2Q96LB1 330 aa10.92□□□□□ -0.66
TOM1L1-216ENST00000573607 CDK15Q96Q40 435 aa10.92□□□□□ -0.66
TOM1L1-216ENST00000573607 DNAAF2Q9NVR5 837 aaKnown RBP10.92□□□□□ -0.66
TOM1L1-216ENST00000573607 PLA2G2EQ9NZK7 142 aa10.92□□□□□ -0.66
TOM1L1-216ENST00000573607 ZBTB7CA1YPR0 619 aa10.91□□□□□ -0.66
TOM1L1-216ENST00000573607 FSHRP23945 695 aa10.91□□□□□ -0.66
TOM1L1-216ENST00000573607 DPYDQ12882 1025 aa10.91□□□□□ -0.66
TOM1L1-216ENST00000573607 ANKMY2Q8IV38 441 aa10.91□□□□□ -0.66
TOM1L1-216ENST00000573607 KCTD17Q8N5Z5 321 aa10.91□□□□□ -0.66
TOM1L1-216ENST00000573607 TMPRSS4Q9NRS4 437 aa10.91□□□□□ -0.66
TOM1L1-216ENST00000573607 DKK1O94907 266 aa10.9□□□□□ -0.66
TOM1L1-216ENST00000573607 SPRYD7Q5W111 196 aa10.9□□□□□ -0.66
TOM1L1-216ENST00000573607 TRIM50Q86XT4 487 aa10.9□□□□□ -0.66
TOM1L1-216ENST00000573607 SLAIN2Q9P270 581 aa10.9□□□□□ -0.66
TOM1L1-216ENST00000573607 PCDHGA11Q9Y5H2 935 aa10.9□□□□□ -0.66
TOM1L1-216ENST00000573607 WNT7AO00755 349 aa10.89□□□□□ -0.67
TOM1L1-216ENST00000573607 USP4Q13107 963 aa10.89□□□□□ -0.67
TOM1L1-216ENST00000573607 FAM200AQ8TCP9 573 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms