RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 AEBP2Q6ZN18 517 aaPredicted RBP27.28■■□□□ 1.96
TOM1L1-216ENST00000573607 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
TOM1L1-216ENST00000573607 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
TOM1L1-216ENST00000573607 SENP3Q9H4L4 574 aaPredicted RBP22.91■■□□□ 1.26
TOM1L1-216ENST00000573607 PLPPR3Q6T4P5 718 aa22.12■■□□□ 1.13
TOM1L1-216ENST00000573607 FOXD1Q16676 465 aa21.32■■□□□ 1
TOM1L1-216ENST00000573607 ADRA2BP18089 450 aa20.97■□□□□ 0.95
TOM1L1-216ENST00000573607 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
TOM1L1-216ENST00000573607 PIAS4Q8N2W9 510 aaPredicted RBP20.19■□□□□ 0.82
TOM1L1-216ENST00000573607 KCNA4P22459 653 aa19.79■□□□□ 0.76
TOM1L1-216ENST00000573607 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
TOM1L1-216ENST00000573607 MSH5O43196 834 aa19.33■□□□□ 0.68
TOM1L1-216ENST00000573607 NCBP3Q53F19 620 aaKnown RBP19.15■□□□□ 0.66
TOM1L1-216ENST00000573607 EHMT2Q96KQ7 1210 aa19■□□□□ 0.63
TOM1L1-216ENST00000573607 NPM3O75607 178 aaKnown RBP18.99■□□□□ 0.63
TOM1L1-216ENST00000573607 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
TOM1L1-216ENST00000573607 MAPK8IP2Q13387 824 aaPredicted RBP18.91■□□□□ 0.62
TOM1L1-216ENST00000573607 CNKSR2Q8WXI2 1034 aa18.91■□□□□ 0.62
TOM1L1-216ENST00000573607 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
TOM1L1-216ENST00000573607 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
TOM1L1-216ENST00000573607 RNF216Q9NWF9 866 aaPredicted RBP18.41■□□□□ 0.54
TOM1L1-216ENST00000573607 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
TOM1L1-216ENST00000573607 ZBTB22O15209 634 aa18.26■□□□□ 0.51
TOM1L1-216ENST00000573607 HOXD11P31277 338 aaPredicted RBP18.22■□□□□ 0.51
TOM1L1-216ENST00000573607 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
TOM1L1-216ENST00000573607 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
TOM1L1-216ENST00000573607 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
TOM1L1-216ENST00000573607 DCAF8L1A6NGE4 600 aa17.64■□□□□ 0.41
TOM1L1-216ENST00000573607 MYCNP04198 464 aaPredicted RBP17.46■□□□□ 0.39
TOM1L1-216ENST00000573607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.37■□□□□ 0.37
TOM1L1-216ENST00000573607 ATXN8OSP0DMR3 200 aa17.24■□□□□ 0.35
TOM1L1-216ENST00000573607 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
TOM1L1-216ENST00000573607 ATF5Q9Y2D1 282 aaPredicted RBP17.11■□□□□ 0.33
TOM1L1-216ENST00000573607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
TOM1L1-216ENST00000573607 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
TOM1L1-216ENST00000573607 SAMD1Q6SPF0 538 aaPredicted RBP16.99■□□□□ 0.31
TOM1L1-216ENST00000573607 POTEDQ86YR6 584 aa16.84■□□□□ 0.29
TOM1L1-216ENST00000573607 FKBP8Q14318 412 aa16.7■□□□□ 0.26
TOM1L1-216ENST00000573607 RNF39Q9H2S5 420 aa16.68■□□□□ 0.26
TOM1L1-216ENST00000573607 ZNF219Q9P2Y4 722 aaPredicted RBP16.68■□□□□ 0.26
TOM1L1-216ENST00000573607 APLP2Q06481 763 aa16.66■□□□□ 0.26
TOM1L1-216ENST00000573607 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
TOM1L1-216ENST00000573607 TRHP20396 242 aaPredicted RBP16.53■□□□□ 0.24
TOM1L1-216ENST00000573607 CAPN15O75808 1086 aa16.46■□□□□ 0.23
TOM1L1-216ENST00000573607 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
TOM1L1-216ENST00000573607 MKRN4PQ13434 485 aaPredicted RBP16.36■□□□□ 0.21
TOM1L1-216ENST00000573607 POLA2Q14181 598 aa16.36■□□□□ 0.21
TOM1L1-216ENST00000573607 ABCB7O75027 752 aa16.26■□□□□ 0.19
TOM1L1-216ENST00000573607 FBLN2P98095 1184 aa16.19■□□□□ 0.18
TOM1L1-216ENST00000573607 SPDYE4A6NLX3 237 aa16.17■□□□□ 0.18
TOM1L1-216ENST00000573607 RTN4Q9NQC3 1192 aaKnown RBP16.11■□□□□ 0.17
TOM1L1-216ENST00000573607 DSG3P32926 999 aa16.07■□□□□ 0.16
TOM1L1-216ENST00000573607 AMER1Q5JTC6 1135 aaPredicted RBP16■□□□□ 0.15
TOM1L1-216ENST00000573607 ZBTB12Q9Y330 459 aaPredicted RBP15.98■□□□□ 0.15
TOM1L1-216ENST00000573607 PROM2Q8N271 834 aa15.95■□□□□ 0.14
TOM1L1-216ENST00000573607 CACNB1Q02641 598 aaPredicted RBP15.89■□□□□ 0.13
TOM1L1-216ENST00000573607 FBXO3Q9UK99 471 aa15.84■□□□□ 0.13
TOM1L1-216ENST00000573607 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
TOM1L1-216ENST00000573607 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
TOM1L1-216ENST00000573607 VASPP50552 380 aaPredicted RBP15.69■□□□□ 0.1
TOM1L1-216ENST00000573607 SPDYE2BA6NHP3 402 aa15.65■□□□□ 0.1
TOM1L1-216ENST00000573607 SPDYE6P0CI01 402 aa15.65■□□□□ 0.1
TOM1L1-216ENST00000573607 SPDYE2Q495Y8 402 aa15.65■□□□□ 0.1
TOM1L1-216ENST00000573607 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
TOM1L1-216ENST00000573607 IFNLR1Q8IU57 520 aaPredicted RBP15.57■□□□□ 0.08
TOM1L1-216ENST00000573607 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
TOM1L1-216ENST00000573607 STAG3Q9UJ98 1225 aa15.38■□□□□ 0.05
TOM1L1-216ENST00000573607 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
TOM1L1-216ENST00000573607 SLC24A1O60721 1099 aa15.3■□□□□ 0.04
TOM1L1-216ENST00000573607 PLCD3Q8N3E9 789 aa15.29■□□□□ 0.04
TOM1L1-216ENST00000573607 MIER1Q8N108 512 aa15.28■□□□□ 0.04
TOM1L1-216ENST00000573607 PKD2Q13563 968 aa15.25■□□□□ 0.03
TOM1L1-216ENST00000573607 SPOCK2Q92563 424 aa15.24■□□□□ 0.03
TOM1L1-216ENST00000573607 RBM42Q9BTD8 480 aaKnown RBP15.17■□□□□ 0.02
TOM1L1-216ENST00000573607 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
TOM1L1-216ENST00000573607 DCAF8L2P0C7V8 631 aa15.08■□□□□ 0
TOM1L1-216ENST00000573607 SPDYE1Q8NFV5 336 aaPredicted RBP15.07■□□□□ 0
TOM1L1-216ENST00000573607 REM2Q8IYK8 340 aaPredicted RBP15.06■□□□□ 0
TOM1L1-216ENST00000573607 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
TOM1L1-216ENST00000573607 PLEKHG5O94827 1062 aa15.04■□□□□ -0
TOM1L1-216ENST00000573607 ECM2O94769 699 aaPredicted RBP15.02■□□□□ -0
TOM1L1-216ENST00000573607 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
TOM1L1-216ENST00000573607 PRR29P0C7W0 189 aa14.96□□□□□ -0.01
TOM1L1-216ENST00000573607 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.01
TOM1L1-216ENST00000573607 CREBZFQ9NS37 354 aa14.93□□□□□ -0.02
TOM1L1-216ENST00000573607 PITPNM1O00562 1244 aa14.91□□□□□ -0.02
TOM1L1-216ENST00000573607 RGL2O15211 777 aa14.91□□□□□ -0.02
TOM1L1-216ENST00000573607 NUBP1P53384 320 aa14.86□□□□□ -0.03
TOM1L1-216ENST00000573607 PLCB2Q00722 1185 aa14.85□□□□□ -0.03
TOM1L1-216ENST00000573607 MNX1P50219 401 aaPredicted RBP14.84□□□□□ -0.03
TOM1L1-216ENST00000573607 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
TOM1L1-216ENST00000573607 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
TOM1L1-216ENST00000573607 GSE1Q14687 1217 aa14.74□□□□□ -0.05
TOM1L1-216ENST00000573607 CHADLQ6NUI6 762 aa14.7□□□□□ -0.06
TOM1L1-216ENST00000573607 RASEFQ8IZ41 740 aa14.7□□□□□ -0.06
TOM1L1-216ENST00000573607 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
TOM1L1-216ENST00000573607 HAP1P54257 671 aaPredicted RBP14.68□□□□□ -0.06
TOM1L1-216ENST00000573607 BBXQ8WY36 941 aaPredicted RBP14.68□□□□□ -0.06
TOM1L1-216ENST00000573607 RNF25Q96BH1 459 aaPredicted RBP14.68□□□□□ -0.06
TOM1L1-216ENST00000573607 FAM212AQ96EL1 285 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms