RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ZBTB7CA1YPR0 619 aa23.61■■□□□ 1.37
LITAF-212ENST00000573332 FBLN1P23142 703 aa23.6■■□□□ 1.37
LITAF-212ENST00000573332 IP6K1Q92551 441 aa23.6■■□□□ 1.37
LITAF-212ENST00000573332 EVA1CP58658 441 aa23.59■■□□□ 1.37
LITAF-212ENST00000573332 KIF24Q5T7B8 1368 aa23.59■■□□□ 1.37
LITAF-212ENST00000573332 COL5A2P05997 1499 aaPredicted RBP23.59■■□□□ 1.37
LITAF-212ENST00000573332 RTL1A6NKG5 1358 aa23.57■■□□□ 1.36
LITAF-212ENST00000573332 ANKRD26Q9UPS8 1709 aa23.57■■□□□ 1.36
LITAF-212ENST00000573332 MORC1Q86VD1 984 aa23.57■■□□□ 1.36
LITAF-212ENST00000573332 STRN4Q9NRL3 753 aa23.57■■□□□ 1.36
LITAF-212ENST00000573332 BLMP54132 1417 aaPredicted RBP23.57■■□□□ 1.36
LITAF-212ENST00000573332 SPATA31A5Q5VU36 1347 aa23.57■■□□□ 1.36
LITAF-212ENST00000573332 SPATA31A7Q8IWB4 1347 aa23.57■■□□□ 1.36
LITAF-212ENST00000573332 CDK12Q9NYV4 1490 aaPredicted RBP23.56■■□□□ 1.36
LITAF-212ENST00000573332 RRS1Q15050 365 aaKnown RBP23.56■■□□□ 1.36
LITAF-212ENST00000573332 ZNF316A6NFI3 1004 aaPredicted RBP23.55■■□□□ 1.36
LITAF-212ENST00000573332 HOXC9P31274 260 aa23.55■■□□□ 1.36
LITAF-212ENST00000573332 AMPHP49418 695 aa23.55■■□□□ 1.36
LITAF-212ENST00000573332 WDR17Q8IZU2 1322 aa23.55■■□□□ 1.36
LITAF-212ENST00000573332 ONECUT3O60422 494 aaPredicted RBP23.54■■□□□ 1.36
LITAF-212ENST00000573332 LARP1Q6PKG0 1096 aaKnown RBP23.54■■□□□ 1.36
LITAF-212ENST00000573332 ILDR2Q71H61 639 aa23.54■■□□□ 1.36
LITAF-212ENST00000573332 POLKQ9UBT6 870 aa23.54■■□□□ 1.36
LITAF-212ENST00000573332 SPATA31A1Q5TZJ5 1347 aa23.54■■□□□ 1.36
LITAF-212ENST00000573332 LTN1O94822 1766 aa23.53■■□□□ 1.36
LITAF-212ENST00000573332 CCDC9Q9Y3X0 531 aaKnown RBP23.53■■□□□ 1.36
LITAF-212ENST00000573332 ERBB3P21860 1342 aa23.53■■□□□ 1.36
LITAF-212ENST00000573332 GLI3P10071 1580 aa23.52■■□□□ 1.36
LITAF-212ENST00000573332 CRB1P82279 1406 aa23.52■■□□□ 1.36
LITAF-212ENST00000573332 DDX10Q13206 875 aaKnown RBP23.52■■□□□ 1.36
LITAF-212ENST00000573332 FLT4P35916 1363 aa23.52■■□□□ 1.36
LITAF-212ENST00000573332 CC2D1BQ5T0F9 858 aaKnown RBP23.51■■□□□ 1.35
LITAF-212ENST00000573332 EMILIN1Q9Y6C2 1016 aa23.51■■□□□ 1.35
LITAF-212ENST00000573332 ANKRD24Q8TF21 1146 aa23.5■■□□□ 1.35
LITAF-212ENST00000573332 THRAP3Q9Y2W1 955 aaKnown RBP23.5■■□□□ 1.35
LITAF-212ENST00000573332 INSRP06213 1382 aa23.5■■□□□ 1.35
LITAF-212ENST00000573332 TNNT2P45379 298 aaPredicted RBP23.49■■□□□ 1.35
LITAF-212ENST00000573332 CSB-PGBD3P0DP91 1061 aa23.48■■□□□ 1.35
LITAF-212ENST00000573332 BARGINQ6ZT62 677 aa23.48■■□□□ 1.35
LITAF-212ENST00000573332 TOM1L2Q6ZVM7 507 aa23.48■■□□□ 1.35
LITAF-212ENST00000573332 TCP11L2Q8N4U5 519 aa23.48■■□□□ 1.35
LITAF-212ENST00000573332 CARD10Q9BWT7 1032 aa23.48■■□□□ 1.35
LITAF-212ENST00000573332 SMG6Q86US8 1419 aaKnown RBP23.48■■□□□ 1.35
LITAF-212ENST00000573332 HSP90AB2PQ58FF8 381 aa23.47■■□□□ 1.35
LITAF-212ENST00000573332 RGS12O14924 1447 aa23.46■■□□□ 1.35
LITAF-212ENST00000573332 PEAK1Q9H792 1746 aa23.46■■□□□ 1.35
LITAF-212ENST00000573332 RGPD5Q99666 1765 aa23.45■■□□□ 1.34
LITAF-212ENST00000573332 PPM1GO15355 546 aaPredicted RBP23.44■■□□□ 1.34
LITAF-212ENST00000573332 FAM98CQ17RN3 349 aaKnown RBP23.44■■□□□ 1.34
LITAF-212ENST00000573332 USP35Q9P2H5 1018 aa23.43■■□□□ 1.34
LITAF-212ENST00000573332 SEPT12Q8IYM1 358 aa23.42■■□□□ 1.34
LITAF-212ENST00000573332 NLRP2Q9NX02 1062 aa23.42■■□□□ 1.34
LITAF-212ENST00000573332 MAP2P11137 1827 aaKnown RBP23.41■■□□□ 1.34
LITAF-212ENST00000573332 LTV1Q96GA3 475 aaPredicted RBP23.41■■□□□ 1.34
LITAF-212ENST00000573332 CDCA7Q9BWT1 371 aaPredicted RBP23.4■■□□□ 1.34
LITAF-212ENST00000573332 MTHFSP49914 203 aa23.39■■□□□ 1.33
LITAF-212ENST00000573332 THSD7AQ9UPZ6 1657 aa23.38■■□□□ 1.33
LITAF-212ENST00000573332 PARD3Q8TEW0 1356 aa23.38■■□□□ 1.33
LITAF-212ENST00000573332 FAM208AQ9UK61 1670 aaKnown RBP23.38■■□□□ 1.33
LITAF-212ENST00000573332 DISP2A7MBM2 1401 aa23.37■■□□□ 1.33
LITAF-212ENST00000573332 CNGB1Q14028 1251 aaPredicted RBP23.37■■□□□ 1.33
LITAF-212ENST00000573332 NBPF6Q5VWK0 638 aa23.37■■□□□ 1.33
LITAF-212ENST00000573332 NBPF4Q96M43 638 aa23.37■■□□□ 1.33
LITAF-212ENST00000573332 EIF4A2Q14240 407 aaKnown RBP23.35■■□□□ 1.33
LITAF-212ENST00000573332 A0A0G2JS52 829 aa23.34■■□□□ 1.33
LITAF-212ENST00000573332 PPP2R1AP30153 589 aa23.34■■□□□ 1.33
LITAF-212ENST00000573332 MYT1Q01538 1121 aa23.34■■□□□ 1.33
LITAF-212ENST00000573332 RALBP1Q15311 655 aa23.34■■□□□ 1.33
LITAF-212ENST00000573332 NCAPD2Q15021 1401 aa23.33■■□□□ 1.33
LITAF-212ENST00000573332 IL2RBP14784 551 aa23.33■■□□□ 1.33
LITAF-212ENST00000573332 KRT27Q7Z3Y8 459 aa23.32■■□□□ 1.32
LITAF-212ENST00000573332 EYA1Q99502 592 aa23.32■■□□□ 1.32
LITAF-212ENST00000573332 IL13P35225 146 aa23.3■■□□□ 1.32
LITAF-212ENST00000573332 PARP4Q9UKK3 1724 aaKnown RBP23.3■■□□□ 1.32
LITAF-212ENST00000573332 DDB1Q16531 1140 aa23.29■■□□□ 1.32
LITAF-212ENST00000573332 IGSF1Q8N6C5 1336 aa23.29■■□□□ 1.32
LITAF-212ENST00000573332 EXOC5O00471 708 aa23.27■■□□□ 1.32
LITAF-212ENST00000573332 PDE3BQ13370 1112 aa23.27■■□□□ 1.32
LITAF-212ENST00000573332 USHBP1Q8N6Y0 703 aa23.27■■□□□ 1.32
LITAF-212ENST00000573332 COL3A1P02461 1466 aaPredicted RBP23.26■■□□□ 1.31
LITAF-212ENST00000573332 DIAPH1O60610 1272 aaKnown RBP23.26■■□□□ 1.31
LITAF-212ENST00000573332 CFAP53Q96M91 514 aa23.26■■□□□ 1.31
LITAF-212ENST00000573332 WNK3Q9BYP7 1800 aa23.26■■□□□ 1.31
LITAF-212ENST00000573332 SOCS7O14512 581 aa23.25■■□□□ 1.31
LITAF-212ENST00000573332 RAPGEF4Q8WZA2 1011 aa23.25■■□□□ 1.31
LITAF-212ENST00000573332 PRKRIP1Q9H875 184 aaPredicted RBP23.25■■□□□ 1.31
LITAF-212ENST00000573332 TNS2Q63HR2 1409 aa23.25■■□□□ 1.31
LITAF-212ENST00000573332 RGPD2P0DJD1 1756 aa23.24■■□□□ 1.31
LITAF-212ENST00000573332 BRWD3Q6RI45 1802 aa23.24■■□□□ 1.31
LITAF-212ENST00000573332 LRRC37A3O60309 1634 aa23.24■■□□□ 1.31
LITAF-212ENST00000573332 PLEKHG2Q9H7P9 1386 aa23.24■■□□□ 1.31
LITAF-212ENST00000573332 MEGF6O75095 1541 aa23.23■■□□□ 1.31
LITAF-212ENST00000573332 TATP17735 454 aaPredicted RBP23.23■■□□□ 1.31
LITAF-212ENST00000573332 OVOS2A0A0G2JMS6 1433 aa23.23■■□□□ 1.31
LITAF-212ENST00000573332 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
LITAF-212ENST00000573332 KDRP35968 1356 aa23.21■■□□□ 1.31
LITAF-212ENST00000573332 RGPD1P0DJD0 1748 aa23.2■■□□□ 1.3
LITAF-212ENST00000573332 FAM196AQ6ZSG2 479 aa23.2■■□□□ 1.3
LITAF-212ENST00000573332 MARCH10Q8NA82 808 aaPredicted RBP23.2■■□□□ 1.3
LITAF-212ENST00000573332 ZCRB1Q8TBF4 217 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms