RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 PLCH1Q4KWH8 1693 aa31.55■■■□□ 2.64
TVP23A-206ENST00000572980 USP21Q9UK80 565 aa31.55■■■□□ 2.64
TVP23A-206ENST00000572980 COL18A1P39060 1754 aa31.54■■■□□ 2.64
TVP23A-206ENST00000572980 HOXC9P31274 260 aa31.54■■■□□ 2.64
TVP23A-206ENST00000572980 AXIN2Q9Y2T1 843 aa31.54■■■□□ 2.64
TVP23A-206ENST00000572980 NWD2Q9ULI1 1742 aa31.54■■■□□ 2.64
TVP23A-206ENST00000572980 LMO7Q8WWI1 1683 aa31.54■■■□□ 2.64
TVP23A-206ENST00000572980 FLT4P35916 1363 aa31.53■■■□□ 2.64
TVP23A-206ENST00000572980 CAMTA1Q9Y6Y1 1673 aa31.53■■■□□ 2.64
TVP23A-206ENST00000572980 EVA1CP58658 441 aa31.52■■■□□ 2.64
TVP23A-206ENST00000572980 UNC5CLQ8IV45 518 aa31.52■■■□□ 2.64
TVP23A-206ENST00000572980 BLMP54132 1417 aaPredicted RBP31.51■■■□□ 2.64
TVP23A-206ENST00000572980 ZNF772Q68DY9 489 aaPredicted RBP31.51■■■□□ 2.64
TVP23A-206ENST00000572980 BCL9LQ86UU0 1499 aa31.5■■■□□ 2.63
TVP23A-206ENST00000572980 MTHFSP49914 203 aa31.49■■■□□ 2.63
TVP23A-206ENST00000572980 PRKRIP1Q9H875 184 aaPredicted RBP31.49■■■□□ 2.63
TVP23A-206ENST00000572980 SMG6Q86US8 1419 aaKnown RBP31.49■■■□□ 2.63
TVP23A-206ENST00000572980 PPP2R1AP30153 589 aa31.48■■■□□ 2.63
TVP23A-206ENST00000572980 STRN4Q9NRL3 753 aa31.48■■■□□ 2.63
TVP23A-206ENST00000572980 COL5A2P05997 1499 aaPredicted RBP31.47■■■□□ 2.63
TVP23A-206ENST00000572980 PEAK1Q9H792 1746 aa31.47■■■□□ 2.63
TVP23A-206ENST00000572980 ANP32CO43423 234 aa31.47■■■□□ 2.63
TVP23A-206ENST00000572980 HSP90AB2PQ58FF8 381 aa31.47■■■□□ 2.63
TVP23A-206ENST00000572980 RGPD5Q99666 1765 aa31.46■■■□□ 2.63
TVP23A-206ENST00000572980 INSRP06213 1382 aa31.46■■■□□ 2.63
TVP23A-206ENST00000572980 NRAPQ86VF7 1730 aa31.44■■■□□ 2.62
TVP23A-206ENST00000572980 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.44■■■□□ 2.62
TVP23A-206ENST00000572980 CSB-PGBD3P0DP91 1061 aa31.44■■■□□ 2.62
TVP23A-206ENST00000572980 TRPC5Q9UL62 973 aaPredicted RBP31.44■■■□□ 2.62
TVP23A-206ENST00000572980 ERBB3P21860 1342 aa31.44■■■□□ 2.62
TVP23A-206ENST00000572980 ANKRD24Q8TF21 1146 aa31.43■■■□□ 2.62
TVP23A-206ENST00000572980 CDK12Q9NYV4 1490 aaPredicted RBP31.43■■■□□ 2.62
TVP23A-206ENST00000572980 VPS72Q15906 364 aa31.42■■■□□ 2.62
TVP23A-206ENST00000572980 LTV1Q96GA3 475 aaPredicted RBP31.42■■■□□ 2.62
TVP23A-206ENST00000572980 QTRT2Q9H974 415 aaKnown RBP31.42■■■□□ 2.62
TVP23A-206ENST00000572980 WDR17Q8IZU2 1322 aa31.42■■■□□ 2.62
TVP23A-206ENST00000572980 MYBBP1AQ9BQG0 1328 aaKnown RBP31.42■■■□□ 2.62
TVP23A-206ENST00000572980 RGS17Q9UGC6 210 aaPredicted RBP31.41■■■□□ 2.62
TVP23A-206ENST00000572980 LARP1Q6PKG0 1096 aaKnown RBP31.4■■■□□ 2.62
TVP23A-206ENST00000572980 CCDC9Q9Y3X0 531 aaKnown RBP31.4■■■□□ 2.62
TVP23A-206ENST00000572980 TOM1L2Q6ZVM7 507 aa31.39■■■□□ 2.62
TVP23A-206ENST00000572980 CFAP53Q96M91 514 aa31.39■■■□□ 2.61
TVP23A-206ENST00000572980 ATRNO75882 1429 aa31.38■■■□□ 2.61
TVP23A-206ENST00000572980 DIEXFQ68CQ4 756 aaKnown RBP31.38■■■□□ 2.61
TVP23A-206ENST00000572980 CRB1P82279 1406 aa31.37■■■□□ 2.61
TVP23A-206ENST00000572980 NLRP2Q9NX02 1062 aa31.35■■■□□ 2.61
TVP23A-206ENST00000572980 GJD4Q96KN9 370 aaPredicted RBP31.34■■■□□ 2.61
TVP23A-206ENST00000572980 SPATA31A5Q5VU36 1347 aa31.34■■■□□ 2.61
TVP23A-206ENST00000572980 SPATA31A7Q8IWB4 1347 aa31.34■■■□□ 2.61
TVP23A-206ENST00000572980 EIF4A2Q14240 407 aaKnown RBP31.34■■■□□ 2.61
TVP23A-206ENST00000572980 CARD10Q9BWT7 1032 aa31.33■■■□□ 2.61
TVP23A-206ENST00000572980 SPATA31A1Q5TZJ5 1347 aa31.32■■■□□ 2.6
TVP23A-206ENST00000572980 FAM208AQ9UK61 1670 aaKnown RBP31.32■■■□□ 2.6
TVP23A-206ENST00000572980 USP35Q9P2H5 1018 aa31.32■■■□□ 2.6
TVP23A-206ENST00000572980 DIAPH1O60610 1272 aaKnown RBP31.31■■■□□ 2.6
TVP23A-206ENST00000572980 POTEAQ6S8J7 498 aa31.3■■■□□ 2.6
TVP23A-206ENST00000572980 RBM6P78332 1123 aaKnown RBP31.3■■■□□ 2.6
TVP23A-206ENST00000572980 TCP11L2Q8N4U5 519 aa31.29■■■□□ 2.6
TVP23A-206ENST00000572980 THRAP3Q9Y2W1 955 aaKnown RBP31.29■■■□□ 2.6
TVP23A-206ENST00000572980 RXRBP28702 533 aa31.28■■■□□ 2.6
TVP23A-206ENST00000572980 IL13P35225 146 aa31.28■■■□□ 2.6
TVP23A-206ENST00000572980 NBPF6Q5VWK0 638 aa31.28■■■□□ 2.6
TVP23A-206ENST00000572980 NBPF4Q96M43 638 aa31.28■■■□□ 2.6
TVP23A-206ENST00000572980 COL3A1P02461 1466 aaPredicted RBP31.26■■■□□ 2.59
TVP23A-206ENST00000572980 EYA1Q99502 592 aa31.26■■■□□ 2.59
TVP23A-206ENST00000572980 NUDCQ9Y266 331 aa31.25■■■□□ 2.59
TVP23A-206ENST00000572980 GLI3P10071 1580 aa31.23■■■□□ 2.59
TVP23A-206ENST00000572980 RGPD2P0DJD1 1756 aa31.23■■■□□ 2.59
TVP23A-206ENST00000572980 BARGINQ6ZT62 677 aa31.23■■■□□ 2.59
TVP23A-206ENST00000572980 FAM98CQ17RN3 349 aaKnown RBP31.21■■■□□ 2.59
TVP23A-206ENST00000572980 IGSF1Q8N6C5 1336 aa31.21■■■□□ 2.59
TVP23A-206ENST00000572980 USHBP1Q8N6Y0 703 aa31.2■■■□□ 2.58
TVP23A-206ENST00000572980 U2SURPO15042 1029 aaKnown RBP31.19■■■□□ 2.58
TVP23A-206ENST00000572980 ONECUT3O60422 494 aaPredicted RBP31.18■■■□□ 2.58
TVP23A-206ENST00000572980 CDCA7Q9BWT1 371 aaPredicted RBP31.18■■■□□ 2.58
TVP23A-206ENST00000572980 IL2RBP14784 551 aa31.17■■■□□ 2.58
TVP23A-206ENST00000572980 NCAPD2Q15021 1401 aa31.16■■■□□ 2.58
TVP23A-206ENST00000572980 A0A0G2JS52 829 aa31.16■■■□□ 2.58
TVP23A-206ENST00000572980 MYT1Q01538 1121 aa31.16■■■□□ 2.58
TVP23A-206ENST00000572980 RAPGEF4Q8WZA2 1011 aa31.15■■■□□ 2.58
TVP23A-206ENST00000572980 RGPD1P0DJD0 1748 aa31.15■■■□□ 2.58
TVP23A-206ENST00000572980 SULT6B1Q6IMI4 303 aa31.14■■■□□ 2.58
TVP23A-206ENST00000572980 U2AF1L5P0DN76 240 aaPredicted RBP31.13■■■□□ 2.57
TVP23A-206ENST00000572980 U2AF1Q01081 240 aaKnown RBP eCLIP31.13■■■□□ 2.57
TVP23A-206ENST00000572980 SEPT12Q8IYM1 358 aa31.12■■■□□ 2.57
TVP23A-206ENST00000572980 MRS2Q9HD23 443 aa31.11■■■□□ 2.57
TVP23A-206ENST00000572980 DISP2A7MBM2 1401 aa31.11■■■□□ 2.57
TVP23A-206ENST00000572980 KDRP35968 1356 aa31.11■■■□□ 2.57
TVP23A-206ENST00000572980 HMOX1P09601 288 aa31.1■■■□□ 2.57
TVP23A-206ENST00000572980 TATP17735 454 aaPredicted RBP31.1■■■□□ 2.57
TVP23A-206ENST00000572980 CCDC184Q52MB2 194 aa31.09■■■□□ 2.57
TVP23A-206ENST00000572980 AEBP1Q8IUX7 1158 aa31.09■■■□□ 2.57
TVP23A-206ENST00000572980 WNK3Q9BYP7 1800 aa31.09■■■□□ 2.57
TVP23A-206ENST00000572980 WDR43Q15061 677 aaKnown RBP eCLIP31.08■■■□□ 2.57
TVP23A-206ENST00000572980 THSD7AQ9UPZ6 1657 aa31.08■■■□□ 2.57
TVP23A-206ENST00000572980 DDB1Q16531 1140 aa31.07■■■□□ 2.56
TVP23A-206ENST00000572980 EXOC5O00471 708 aa31.06■■■□□ 2.56
TVP23A-206ENST00000572980 MEGF6O75095 1541 aa31.06■■■□□ 2.56
TVP23A-206ENST00000572980 MIER1Q8N108 512 aa31.05■■■□□ 2.56
TVP23A-206ENST00000572980 RGS12O14924 1447 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms