RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 CSB-PGBD3P0DP91 1061 aa12.73□□□□□ -0.37
NPLOC4-208ENST00000572351 MTHFSP49914 203 aa12.73□□□□□ -0.37
NPLOC4-208ENST00000572351 EVA1CP58658 441 aa12.73□□□□□ -0.37
NPLOC4-208ENST00000572351 IP6K1Q92551 441 aa12.73□□□□□ -0.37
NPLOC4-208ENST00000572351 CFAP53Q96M91 514 aa12.73□□□□□ -0.37
NPLOC4-208ENST00000572351 BTG4Q9NY30 223 aa12.73□□□□□ -0.37
NPLOC4-208ENST00000572351 RTL1A6NKG5 1358 aa12.72□□□□□ -0.37
NPLOC4-208ENST00000572351 FLT4P35916 1363 aa12.72□□□□□ -0.37
NPLOC4-208ENST00000572351 HOXC9P31274 260 aa12.72□□□□□ -0.37
NPLOC4-208ENST00000572351 LTV1Q96GA3 475 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-208ENST00000572351 STRN4Q9NRL3 753 aa12.72□□□□□ -0.37
NPLOC4-208ENST00000572351 PHRF1Q9P1Y6 1649 aaKnown RBP12.72□□□□□ -0.37
NPLOC4-208ENST00000572351 KIF24Q5T7B8 1368 aa12.71□□□□□ -0.37
NPLOC4-208ENST00000572351 USP54Q70EL1 1684 aa12.71□□□□□ -0.37
NPLOC4-208ENST00000572351 HSP90AB2PQ58FF8 381 aa12.71□□□□□ -0.37
NPLOC4-208ENST00000572351 USP21Q9UK80 565 aa12.71□□□□□ -0.37
NPLOC4-208ENST00000572351 AFF2P51816 1311 aa12.7□□□□□ -0.38
NPLOC4-208ENST00000572351 AXIN2Q9Y2T1 843 aa12.7□□□□□ -0.38
NPLOC4-208ENST00000572351 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
NPLOC4-208ENST00000572351 FNBP4Q8N3X1 1017 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-208ENST00000572351 ANKRD24Q8TF21 1146 aa12.69□□□□□ -0.38
NPLOC4-208ENST00000572351 CCDC9Q9Y3X0 531 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-208ENST00000572351 BLMP54132 1417 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-208ENST00000572351 TOM1L2Q6ZVM7 507 aa12.68□□□□□ -0.38
NPLOC4-208ENST00000572351 UNC5CLQ8IV45 518 aa12.68□□□□□ -0.38
NPLOC4-208ENST00000572351 ABCA3Q99758 1704 aa12.68□□□□□ -0.38
NPLOC4-208ENST00000572351 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
NPLOC4-208ENST00000572351 MARF1Q9Y4F3 1742 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-208ENST00000572351 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
NPLOC4-208ENST00000572351 INSRP06213 1382 aa12.68□□□□□ -0.38
NPLOC4-208ENST00000572351 CDK12Q9NYV4 1490 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-208ENST00000572351 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-208ENST00000572351 ZNF772Q68DY9 489 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-208ENST00000572351 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
NPLOC4-208ENST00000572351 ERBB3P21860 1342 aa12.66□□□□□ -0.38
NPLOC4-208ENST00000572351 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-208ENST00000572351 LARP1Q6PKG0 1096 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-208ENST00000572351 USP35Q9P2H5 1018 aa12.66□□□□□ -0.38
NPLOC4-208ENST00000572351 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
NPLOC4-208ENST00000572351 SLIT2O94813 1529 aa12.66□□□□□ -0.38
NPLOC4-208ENST00000572351 ABCC6O95255 1503 aa12.66□□□□□ -0.38
NPLOC4-208ENST00000572351 COL14A1Q05707 1796 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-208ENST00000572351 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-208ENST00000572351 WDR17Q8IZU2 1322 aa12.65□□□□□ -0.38
NPLOC4-208ENST00000572351 U2SURPO15042 1029 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-208ENST00000572351 MRS2Q9HD23 443 aa12.65□□□□□ -0.38
NPLOC4-208ENST00000572351 TRPC5Q9UL62 973 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-208ENST00000572351 CAMTA1Q9Y6Y1 1673 aa12.64□□□□□ -0.39
NPLOC4-208ENST00000572351 BCL9LQ86UU0 1499 aa12.64□□□□□ -0.39
NPLOC4-208ENST00000572351 IL13P35225 146 aa12.63□□□□□ -0.39
NPLOC4-208ENST00000572351 VPS72Q15906 364 aa12.63□□□□□ -0.39
NPLOC4-208ENST00000572351 QTRT2Q9H974 415 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-208ENST00000572351 WDR43Q15061 677 aaKnown RBP eCLIP12.62□□□□□ -0.39
NPLOC4-208ENST00000572351 MIER1Q8N108 512 aa12.62□□□□□ -0.39
NPLOC4-208ENST00000572351 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
NPLOC4-208ENST00000572351 CRB1P82279 1406 aa12.62□□□□□ -0.39
NPLOC4-208ENST00000572351 A0A0G2JS52 829 aa12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 U2AF1L5P0DN76 240 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 U2AF1Q01081 240 aaKnown RBP eCLIP12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 MYT1Q01538 1121 aa12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 NBPF6Q5VWK0 638 aa12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 TCP11L2Q8N4U5 519 aa12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 USHBP1Q8N6Y0 703 aa12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 NBPF4Q96M43 638 aa12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 EYA1Q99502 592 aa12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 CARD10Q9BWT7 1032 aa12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 SPATA31A5Q5VU36 1347 aa12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 SPATA31A7Q8IWB4 1347 aa12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
NPLOC4-208ENST00000572351 SULT6B1Q6IMI4 303 aa12.6□□□□□ -0.39
NPLOC4-208ENST00000572351 GJD4Q96KN9 370 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-208ENST00000572351 LTN1O94822 1766 aa12.6□□□□□ -0.39
NPLOC4-208ENST00000572351 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
NPLOC4-208ENST00000572351 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-208ENST00000572351 PLCH1Q4KWH8 1693 aa12.59□□□□□ -0.39
NPLOC4-208ENST00000572351 CCER2I3L3R5 266 aa12.59□□□□□ -0.39
NPLOC4-208ENST00000572351 HMOX1P09601 288 aa12.59□□□□□ -0.39
NPLOC4-208ENST00000572351 CCDC184Q52MB2 194 aa12.59□□□□□ -0.39
NPLOC4-208ENST00000572351 RAPGEF4Q8WZA2 1011 aa12.59□□□□□ -0.39
NPLOC4-208ENST00000572351 ATRNO75882 1429 aa12.59□□□□□ -0.39
NPLOC4-208ENST00000572351 IGSF1Q8N6C5 1336 aa12.59□□□□□ -0.39
NPLOC4-208ENST00000572351 RXRBP28702 533 aa12.58□□□□□ -0.4
NPLOC4-208ENST00000572351 RBM6P78332 1123 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-208ENST00000572351 FAM98CQ17RN3 349 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-208ENST00000572351 THRAP3Q9Y2W1 955 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-208ENST00000572351 COL18A1P39060 1754 aa12.57□□□□□ -0.4
NPLOC4-208ENST00000572351 NEFMP07197 916 aa12.57□□□□□ -0.4
NPLOC4-208ENST00000572351 IL2RBP14784 551 aa12.57□□□□□ -0.4
NPLOC4-208ENST00000572351 AEBP1Q8IUX7 1158 aa12.57□□□□□ -0.4
NPLOC4-208ENST00000572351 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-208ENST00000572351 RGS17Q9UGC6 210 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-208ENST00000572351 NWD2Q9ULI1 1742 aa12.57□□□□□ -0.4
NPLOC4-208ENST00000572351 TATP17735 454 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-208ENST00000572351 BARGINQ6ZT62 677 aa12.56□□□□□ -0.4
NPLOC4-208ENST00000572351 PNNQ9H307 717 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-208ENST00000572351 NRAPQ86VF7 1730 aa12.55□□□□□ -0.4
NPLOC4-208ENST00000572351 POTEAQ6S8J7 498 aa12.55□□□□□ -0.4
NPLOC4-208ENST00000572351 FAM9BQ8IZU0 186 aa12.55□□□□□ -0.4
NPLOC4-208ENST00000572351 FCHSD2O94868 740 aa12.54□□□□□ -0.4
NPLOC4-208ENST00000572351 PRKAR2BP31323 418 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms