RNA–Protein interactions for RNA: ENST00000571079.1

FXR2-202, Transcript of FMR1 autosomal homolog 2, humanhuman

TSL 4

Gene FXR2, Length 462 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-202ENST00000571079 PRR36Q9H6K5 1346 aa13.39□□□□□ -0.27
FXR2-202ENST00000571079 DHX57Q6P158 1386 aaKnown RBP13.38□□□□□ -0.27
FXR2-202ENST00000571079 PRAM1Q96QH2 718 aa13.37□□□□□ -0.27
FXR2-202ENST00000571079 THRAP3Q9Y2W1 955 aaKnown RBP13.37□□□□□ -0.27
FXR2-202ENST00000571079 WNK3Q9BYP7 1800 aa13.36□□□□□ -0.27
FXR2-202ENST00000571079 COL24A1Q17RW2 1714 aa13.36□□□□□ -0.27
FXR2-202ENST00000571079 HSPA1AP0DMV8 641 aaKnown RBP13.36□□□□□ -0.27
FXR2-202ENST00000571079 HSPA1BP0DMV9 641 aaKnown RBP13.36□□□□□ -0.27
FXR2-202ENST00000571079 FAM161AQ3B820 660 aa13.36□□□□□ -0.27
FXR2-202ENST00000571079 RGL3Q3MIN7 710 aa13.36□□□□□ -0.27
FXR2-202ENST00000571079 TNS2Q63HR2 1409 aa13.36□□□□□ -0.27
FXR2-202ENST00000571079 RPGRIP1LQ68CZ1 1315 aa13.36□□□□□ -0.27
FXR2-202ENST00000571079 COL5A2P05997 1499 aaPredicted RBP13.36□□□□□ -0.27
FXR2-202ENST00000571079 KAT6BQ8WYB5 2073 aa13.35□□□□□ -0.27
FXR2-202ENST00000571079 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
FXR2-202ENST00000571079 KCNQ4P56696 695 aa13.35□□□□□ -0.27
FXR2-202ENST00000571079 MSL1Q68DK7 614 aa13.35□□□□□ -0.27
FXR2-202ENST00000571079 LRRC4BQ9NT99 713 aa13.35□□□□□ -0.27
FXR2-202ENST00000571079 ARHGEF28Q8N1W1 1705 aaKnown RBP13.35□□□□□ -0.27
FXR2-202ENST00000571079 TOMM70O94826 608 aa13.34□□□□□ -0.27
FXR2-202ENST00000571079 NMRK2Q9NPI5 230 aa13.34□□□□□ -0.27
FXR2-202ENST00000571079 PNPLA7Q6ZV29 1317 aa13.34□□□□□ -0.27
FXR2-202ENST00000571079 CRB1P82279 1406 aa13.33□□□□□ -0.28
FXR2-202ENST00000571079 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
FXR2-202ENST00000571079 MINK1Q8N4C8 1332 aaPredicted RBP13.33□□□□□ -0.28
FXR2-202ENST00000571079 BTAF1O14981 1849 aa13.32□□□□□ -0.28
FXR2-202ENST00000571079 MSH5O43196 834 aa13.32□□□□□ -0.28
FXR2-202ENST00000571079 APLP2Q06481 763 aa13.32□□□□□ -0.28
FXR2-202ENST00000571079 TOM1L2Q6ZVM7 507 aa13.31□□□□□ -0.28
FXR2-202ENST00000571079 POGKQ9P215 609 aa13.31□□□□□ -0.28
FXR2-202ENST00000571079 NHSQ6T4R5 1651 aa13.31□□□□□ -0.28
FXR2-202ENST00000571079 AKT1S1Q96B36 256 aa13.29□□□□□ -0.28
FXR2-202ENST00000571079 QSER1Q2KHR3 1735 aa13.29□□□□□ -0.28
FXR2-202ENST00000571079 AATKQ6ZMQ8 1374 aa13.29□□□□□ -0.28
FXR2-202ENST00000571079 SLC16A10Q8TF71 515 aa13.28□□□□□ -0.28
FXR2-202ENST00000571079 TFCP2L1Q9NZI6 479 aa13.28□□□□□ -0.28
FXR2-202ENST00000571079 ROCK1Q13464 1354 aa13.28□□□□□ -0.28
FXR2-202ENST00000571079 TULP4Q9NRJ4 1543 aa13.27□□□□□ -0.29
FXR2-202ENST00000571079 CFAP70Q5T0N1 1121 aa13.26□□□□□ -0.29
FXR2-202ENST00000571079 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
FXR2-202ENST00000571079 PIK3C2GO75747 1445 aa13.25□□□□□ -0.29
FXR2-202ENST00000571079 ABTB2Q8N961 1025 aa13.25□□□□□ -0.29
FXR2-202ENST00000571079 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
FXR2-202ENST00000571079 CPDO75976 1380 aa13.24□□□□□ -0.29
FXR2-202ENST00000571079 LOC105371045A0A1W2PR82 267 aa13.24□□□□□ -0.29
FXR2-202ENST00000571079 BCL9O00512 1426 aa13.23□□□□□ -0.29
FXR2-202ENST00000571079 IGSF1Q8N6C5 1336 aa13.23□□□□□ -0.29
FXR2-202ENST00000571079 C16orf71Q8IYS4 520 aaPredicted RBP13.23□□□□□ -0.29
FXR2-202ENST00000571079 USP6P35125 1406 aa13.22□□□□□ -0.29
FXR2-202ENST00000571079 BRD4O60885 1362 aaPredicted RBP13.22□□□□□ -0.29
FXR2-202ENST00000571079 EXOC5O00471 708 aa13.22□□□□□ -0.29
FXR2-202ENST00000571079 GCP02774 474 aa13.22□□□□□ -0.29
FXR2-202ENST00000571079 RBM46Q8TBY0 533 aaKnown RBP13.22□□□□□ -0.29
FXR2-202ENST00000571079 TRAK1Q9UPV9 953 aa13.22□□□□□ -0.29
FXR2-202ENST00000571079 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
FXR2-202ENST00000571079 TNRC18O15417 2968 aaPredicted RBP13.21□□□□□ -0.29
FXR2-202ENST00000571079 WASLO00401 505 aaPredicted RBP13.21□□□□□ -0.29
FXR2-202ENST00000571079 COL23A1Q86Y22 540 aaPredicted RBP13.21□□□□□ -0.29
FXR2-202ENST00000571079 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
FXR2-202ENST00000571079 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
FXR2-202ENST00000571079 USP19O94966 1318 aa13.19□□□□□ -0.3
FXR2-202ENST00000571079 CD2APQ9Y5K6 639 aa13.19□□□□□ -0.3
FXR2-202ENST00000571079 COL18A1P39060 1754 aa13.19□□□□□ -0.3
FXR2-202ENST00000571079 ACEP12821 1306 aa13.18□□□□□ -0.3
FXR2-202ENST00000571079 CSB-PGBD3P0DP91 1061 aa13.18□□□□□ -0.3
FXR2-202ENST00000571079 NUDT16Q96DE0 195 aaKnown RBP13.18□□□□□ -0.3
FXR2-202ENST00000571079 C14orf93Q9H972 538 aaKnown RBP13.18□□□□□ -0.3
FXR2-202ENST00000571079 WDR17Q8IZU2 1322 aa13.17□□□□□ -0.3
FXR2-202ENST00000571079 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
FXR2-202ENST00000571079 PIK3C2AO00443 1686 aa13.16□□□□□ -0.3
FXR2-202ENST00000571079 SOX12O15370 315 aa13.16□□□□□ -0.3
FXR2-202ENST00000571079 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
FXR2-202ENST00000571079 SPATA31E1Q6ZUB1 1445 aa13.15□□□□□ -0.3
FXR2-202ENST00000571079 KCPQ6ZWJ8 1503 aa13.15□□□□□ -0.3
FXR2-202ENST00000571079 FOXN1O15353 648 aa13.15□□□□□ -0.3
FXR2-202ENST00000571079 FSTL1Q12841 308 aa13.15□□□□□ -0.3
FXR2-202ENST00000571079 RRAGCQ9HB90 399 aa13.15□□□□□ -0.3
FXR2-202ENST00000571079 EIF3AQ14152 1382 aaKnown RBP13.15□□□□□ -0.3
FXR2-202ENST00000571079 TRPM1Q7Z4N2 1603 aa13.14□□□□□ -0.31
FXR2-202ENST00000571079 MLLT1Q03111 559 aaPredicted RBP13.14□□□□□ -0.31
FXR2-202ENST00000571079 CDCA7Q9BWT1 371 aaPredicted RBP13.14□□□□□ -0.31
FXR2-202ENST00000571079 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
FXR2-202ENST00000571079 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
FXR2-202ENST00000571079 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
FXR2-202ENST00000571079 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
FXR2-202ENST00000571079 N4BP2Q86UW6 1770 aaPredicted RBP13.12□□□□□ -0.31
FXR2-202ENST00000571079 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
FXR2-202ENST00000571079 ABHD8Q96I13 439 aa13.12□□□□□ -0.31
FXR2-202ENST00000571079 CARD10Q9BWT7 1032 aa13.12□□□□□ -0.31
FXR2-202ENST00000571079 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
FXR2-202ENST00000571079 MKRN1Q9UHC7 482 aaKnown RBP13.1□□□□□ -0.31
FXR2-202ENST00000571079 BCS1LQ9Y276 419 aa13.1□□□□□ -0.31
FXR2-202ENST00000571079 PPIP5K1Q6PFW1 1433 aa13.1□□□□□ -0.31
FXR2-202ENST00000571079 LY75O60449 1722 aa13.1□□□□□ -0.31
FXR2-202ENST00000571079 POLR3AO14802 1390 aaPredicted RBP13.09□□□□□ -0.31
FXR2-202ENST00000571079 ABCC6O95255 1503 aa13.09□□□□□ -0.31
FXR2-202ENST00000571079 CCDC85CA6NKD9 419 aa13.09□□□□□ -0.31
FXR2-202ENST00000571079 NLRP6P59044 892 aa13.09□□□□□ -0.31
FXR2-202ENST00000571079 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
FXR2-202ENST00000571079 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms