RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 TUBGCP6Q96RT7 1819 aa10.83□□□□□ -0.68
SMG6-205ENST00000570659 ZBTB7CA1YPR0 619 aa10.82□□□□□ -0.68
SMG6-205ENST00000570659 NLGN2Q8NFZ4 835 aa10.82□□□□□ -0.68
SMG6-205ENST00000570659 CDK19Q9BWU1 502 aa10.82□□□□□ -0.68
SMG6-205ENST00000570659 PIK3C2AO00443 1686 aa10.82□□□□□ -0.68
SMG6-205ENST00000570659 COL24A1Q17RW2 1714 aa10.81□□□□□ -0.68
SMG6-205ENST00000570659 SLIT3O75094 1523 aa10.81□□□□□ -0.68
SMG6-205ENST00000570659 GCP02774 474 aa10.81□□□□□ -0.68
SMG6-205ENST00000570659 NHSQ6T4R5 1651 aa10.8□□□□□ -0.68
SMG6-205ENST00000570659 DCAF8L1A6NGE4 600 aa10.8□□□□□ -0.68
SMG6-205ENST00000570659 YBX3P16989 372 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMG6-205ENST00000570659 ABTB2Q8N961 1025 aa10.8□□□□□ -0.68
SMG6-205ENST00000570659 MTFR1LQ9H019 292 aa10.8□□□□□ -0.68
SMG6-205ENST00000570659 LRRC4BQ9NT99 713 aa10.8□□□□□ -0.68
SMG6-205ENST00000570659 KDM2AQ9Y2K7 1162 aa10.8□□□□□ -0.68
SMG6-205ENST00000570659 DDB1Q16531 1140 aa10.79□□□□□ -0.68
SMG6-205ENST00000570659 ARXQ96QS3 562 aa10.79□□□□□ -0.68
SMG6-205ENST00000570659 THRAP3Q9Y2W1 955 aaKnown RBP10.79□□□□□ -0.68
SMG6-205ENST00000570659 BTAF1O14981 1849 aa10.79□□□□□ -0.68
SMG6-205ENST00000570659 MAP3K5Q99683 1374 aa10.78□□□□□ -0.68
SMG6-205ENST00000570659 BCL9O00512 1426 aa10.78□□□□□ -0.68
SMG6-205ENST00000570659 PLEKHG3A1L390 1219 aa10.78□□□□□ -0.68
SMG6-205ENST00000570659 GIGYF1O75420 1035 aaPredicted RBP10.78□□□□□ -0.68
SMG6-205ENST00000570659 KCNQ4P56696 695 aa10.78□□□□□ -0.68
SMG6-205ENST00000570659 ACSBG1Q96GR2 724 aa10.78□□□□□ -0.68
SMG6-205ENST00000570659 STK32BQ9NY57 414 aa10.78□□□□□ -0.68
SMG6-205ENST00000570659 EIF3AQ14152 1382 aaKnown RBP10.77□□□□□ -0.68
SMG6-205ENST00000570659 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.69
SMG6-205ENST00000570659 GPR162Q16538 588 aa10.75□□□□□ -0.69
SMG6-205ENST00000570659 TOM1L2Q6ZVM7 507 aa10.75□□□□□ -0.69
SMG6-205ENST00000570659 DCAF11Q8TEB1 546 aa10.75□□□□□ -0.69
SMG6-205ENST00000570659 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
SMG6-205ENST00000570659 WDR17Q8IZU2 1322 aa10.75□□□□□ -0.69
SMG6-205ENST00000570659 PPIP5K1Q6PFW1 1433 aa10.75□□□□□ -0.69
SMG6-205ENST00000570659 TRPM1Q7Z4N2 1603 aa10.74□□□□□ -0.69
SMG6-205ENST00000570659 NBPF1Q3BBV0 1214 aa10.74□□□□□ -0.69
SMG6-205ENST00000570659 PELP1Q8IZL8 1130 aaKnown RBP10.74□□□□□ -0.69
SMG6-205ENST00000570659 KLHL34Q8N239 644 aa10.74□□□□□ -0.69
SMG6-205ENST00000570659 CCDC61Q9Y6R9 512 aa10.74□□□□□ -0.69
SMG6-205ENST00000570659 PNPLA7Q6ZV29 1317 aa10.74□□□□□ -0.69
SMG6-205ENST00000570659 USP6P35125 1406 aa10.74□□□□□ -0.69
SMG6-205ENST00000570659 CPSF1Q10570 1443 aaKnown RBP10.74□□□□□ -0.69
SMG6-205ENST00000570659 ATP10DQ9P241 1426 aa10.74□□□□□ -0.69
SMG6-205ENST00000570659 NFAT5O94916 1531 aa10.74□□□□□ -0.69
SMG6-205ENST00000570659 AKT1S1Q96B36 256 aa10.73□□□□□ -0.69
SMG6-205ENST00000570659 TNS2Q63HR2 1409 aa10.73□□□□□ -0.69
SMG6-205ENST00000570659 QSER1Q2KHR3 1735 aa10.72□□□□□ -0.69
SMG6-205ENST00000570659 SOX12O15370 315 aa10.72□□□□□ -0.69
SMG6-205ENST00000570659 NLRP13Q86W25 1043 aa10.72□□□□□ -0.69
SMG6-205ENST00000570659 ABCC6O95255 1503 aa10.71□□□□□ -0.69
SMG6-205ENST00000570659 NLRP6P59044 892 aa10.71□□□□□ -0.69
SMG6-205ENST00000570659 ARHGEF25Q86VW2 580 aa10.71□□□□□ -0.69
SMG6-205ENST00000570659 ADCY9O60503 1353 aa10.7□□□□□ -0.7
SMG6-205ENST00000570659 CABP1Q9NZU7 370 aa10.7□□□□□ -0.7
SMG6-205ENST00000570659 ZNF526Q8TF50 670 aaPredicted RBP10.69□□□□□ -0.7
SMG6-205ENST00000570659 CARD10Q9BWT7 1032 aa10.69□□□□□ -0.7
SMG6-205ENST00000570659 QRICH2Q9H0J4 1663 aa10.69□□□□□ -0.7
SMG6-205ENST00000570659 NSD2O96028 1365 aa10.68□□□□□ -0.7
SMG6-205ENST00000570659 WWC3Q9ULE0 1092 aa10.68□□□□□ -0.7
SMG6-205ENST00000570659 RAB3GAP2Q9H2M9 1393 aa10.67□□□□□ -0.7
SMG6-205ENST00000570659 MSL1Q68DK7 614 aa10.67□□□□□ -0.7
SMG6-205ENST00000570659 SMIM5Q71RC9 77 aa10.67□□□□□ -0.7
SMG6-205ENST00000570659 AMIGO3Q86WK7 504 aa10.67□□□□□ -0.7
SMG6-205ENST00000570659 LY75O60449 1722 aa10.67□□□□□ -0.7
SMG6-205ENST00000570659 C11orf95C9JLR9 678 aaPredicted RBP10.66□□□□□ -0.7
SMG6-205ENST00000570659 EXOC5O00471 708 aa10.66□□□□□ -0.7
SMG6-205ENST00000570659 HSPA6P17066 643 aa10.66□□□□□ -0.7
SMG6-205ENST00000570659 SRPK2P78362 688 aaKnown RBP10.66□□□□□ -0.7
SMG6-205ENST00000570659 DOT1LQ8TEK3 1739 aa10.66□□□□□ -0.7
SMG6-205ENST00000570659 KAT6BQ8WYB5 2073 aa10.65□□□□□ -0.7
SMG6-205ENST00000570659 BRD4O60885 1362 aaPredicted RBP10.65□□□□□ -0.7
SMG6-205ENST00000570659 LTN1O94822 1766 aa10.65□□□□□ -0.71
SMG6-205ENST00000570659 KIAA1210Q9ULL0 1709 aa10.64□□□□□ -0.71
SMG6-205ENST00000570659 TOGARAM1Q9Y4F4 1720 aa10.64□□□□□ -0.71
SMG6-205ENST00000570659 TTC21BQ7Z4L5 1316 aa10.64□□□□□ -0.71
SMG6-205ENST00000570659 KIF3CO14782 793 aa10.64□□□□□ -0.71
SMG6-205ENST00000570659 CSB-PGBD3P0DP91 1061 aa10.64□□□□□ -0.71
SMG6-205ENST00000570659 COL23A1Q86Y22 540 aaPredicted RBP10.64□□□□□ -0.71
SMG6-205ENST00000570659 DNAJC5GQ8N7S2 189 aa10.64□□□□□ -0.71
SMG6-205ENST00000570659 RGPD2P0DJD1 1756 aa10.63□□□□□ -0.71
SMG6-205ENST00000570659 HTRA3P83110 453 aa10.63□□□□□ -0.71
SMG6-205ENST00000570659 CDCA7Q9BWT1 371 aaPredicted RBP10.63□□□□□ -0.71
SMG6-205ENST00000570659 COL13A1Q5TAT6 717 aaPredicted RBP10.62□□□□□ -0.71
SMG6-205ENST00000570659 FAM208AQ9UK61 1670 aaKnown RBP10.62□□□□□ -0.71
SMG6-205ENST00000570659 CCDC7Q96M83 1385 aa10.62□□□□□ -0.71
SMG6-205ENST00000570659 ERBB3P21860 1342 aa10.61□□□□□ -0.71
SMG6-205ENST00000570659 MON2Q7Z3U7 1717 aa10.61□□□□□ -0.71
SMG6-205ENST00000570659 CD163L1Q9NR16 1453 aa10.61□□□□□ -0.71
SMG6-205ENST00000570659 CENPJQ9HC77 1338 aaPredicted RBP10.6□□□□□ -0.71
SMG6-205ENST00000570659 USP54Q70EL1 1684 aa10.6□□□□□ -0.71
SMG6-205ENST00000570659 CAPN15O75808 1086 aa10.6□□□□□ -0.71
SMG6-205ENST00000570659 GPBP1L1Q9HC44 474 aaPredicted RBP10.6□□□□□ -0.71
SMG6-205ENST00000570659 NLRP2Q9NX02 1062 aa10.6□□□□□ -0.71
SMG6-205ENST00000570659 TFCP2L1Q9NZI6 479 aa10.6□□□□□ -0.71
SMG6-205ENST00000570659 KIAA1551Q9HCM1 1747 aa10.6□□□□□ -0.71
SMG6-205ENST00000570659 IL2RBP14784 551 aa10.59□□□□□ -0.71
SMG6-205ENST00000570659 FBLN1P23142 703 aa10.59□□□□□ -0.71
SMG6-205ENST00000570659 POLD1P28340 1107 aa10.59□□□□□ -0.71
SMG6-205ENST00000570659 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
SMG6-205ENST00000570659 NME9Q86XW9 330 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms