RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
MMP2-208ENST00000570308 KIAA2012Q0VF49 1180 aa12.9□□□□□ -0.34
MMP2-208ENST00000570308 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
MMP2-208ENST00000570308 SHPRHQ149N8 1683 aa12.9□□□□□ -0.34
MMP2-208ENST00000570308 BCAR3O75815 825 aa12.9□□□□□ -0.34
MMP2-208ENST00000570308 IRX3P78415 501 aaPredicted RBP12.9□□□□□ -0.34
MMP2-208ENST00000570308 CC2D1BQ5T0F9 858 aaKnown RBP12.9□□□□□ -0.34
MMP2-208ENST00000570308 SPDYE4A6NLX3 237 aa12.89□□□□□ -0.35
MMP2-208ENST00000570308 TEX2Q8IWB9 1127 aa12.89□□□□□ -0.35
MMP2-208ENST00000570308 DNAJC2Q99543 621 aaKnown RBP12.89□□□□□ -0.35
MMP2-208ENST00000570308 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
MMP2-208ENST00000570308 RIMS2Q9UQ26 1411 aa12.89□□□□□ -0.35
MMP2-208ENST00000570308 ANKRD36BQ8N2N9 1353 aa12.89□□□□□ -0.35
MMP2-208ENST00000570308 SLFN5Q08AF3 891 aa12.89□□□□□ -0.35
MMP2-208ENST00000570308 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.35
MMP2-208ENST00000570308 PDZRN3Q9UPQ7 1066 aa12.89□□□□□ -0.35
MMP2-208ENST00000570308 PLEKHH1Q9ULM0 1364 aa12.89□□□□□ -0.35
MMP2-208ENST00000570308 PPP2R1AP30153 589 aa12.88□□□□□ -0.35
MMP2-208ENST00000570308 KIF3AQ9Y496 699 aa12.88□□□□□ -0.35
MMP2-208ENST00000570308 POLR3AO14802 1390 aaPredicted RBP12.88□□□□□ -0.35
MMP2-208ENST00000570308 PTMAP06454 111 aaKnown RBP12.88□□□□□ -0.35
MMP2-208ENST00000570308 PDCL2Q8N4E4 241 aa12.88□□□□□ -0.35
MMP2-208ENST00000570308 SNX21Q969T3 373 aa12.88□□□□□ -0.35
MMP2-208ENST00000570308 ADGRB2O60241 1585 aa12.88□□□□□ -0.35
MMP2-208ENST00000570308 SIRT1Q96EB6 747 aa12.88□□□□□ -0.35
MMP2-208ENST00000570308 COG6Q9Y2V7 657 aa12.88□□□□□ -0.35
MMP2-208ENST00000570308 IGSF3O75054 1194 aa12.87□□□□□ -0.35
MMP2-208ENST00000570308 KCNJ4P48050 445 aa12.87□□□□□ -0.35
MMP2-208ENST00000570308 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
MMP2-208ENST00000570308 RBSNQ9H1K0 784 aa12.87□□□□□ -0.35
MMP2-208ENST00000570308 EVC2Q86UK5 1308 aa12.87□□□□□ -0.35
MMP2-208ENST00000570308 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
MMP2-208ENST00000570308 TSC1Q92574 1164 aa12.87□□□□□ -0.35
MMP2-208ENST00000570308 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
MMP2-208ENST00000570308 FAM135BQ49AJ0 1406 aa12.86□□□□□ -0.35
MMP2-208ENST00000570308 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
MMP2-208ENST00000570308 SLIT1O75093 1534 aa12.86□□□□□ -0.35
MMP2-208ENST00000570308 CCDC66A2RUB6 948 aa12.86□□□□□ -0.35
MMP2-208ENST00000570308 SLC20A2Q08357 652 aa12.86□□□□□ -0.35
MMP2-208ENST00000570308 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
MMP2-208ENST00000570308 CAVIN1Q6NZI2 390 aaKnown RBP12.86□□□□□ -0.35
MMP2-208ENST00000570308 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
MMP2-208ENST00000570308 C3P01024 1663 aa12.86□□□□□ -0.35
MMP2-208ENST00000570308 ZNF521Q96K83 1311 aa12.85□□□□□ -0.35
MMP2-208ENST00000570308 NKTRP30414 1462 aaKnown RBP12.85□□□□□ -0.35
MMP2-208ENST00000570308 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
MMP2-208ENST00000570308 ZSCAN23Q3MJ62 389 aa12.85□□□□□ -0.35
MMP2-208ENST00000570308 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
MMP2-208ENST00000570308 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.85□□□□□ -0.35
MMP2-208ENST00000570308 CARD14Q9BXL6 1004 aa12.85□□□□□ -0.35
MMP2-208ENST00000570308 RWDD1Q9H446 243 aaPredicted RBP12.85□□□□□ -0.35
MMP2-208ENST00000570308 DIP2AQ14689 1571 aa12.85□□□□□ -0.35
MMP2-208ENST00000570308 ARHGAP23Q9P227 1491 aa12.85□□□□□ -0.35
MMP2-208ENST00000570308 ZBTB7CA1YPR0 619 aa12.84□□□□□ -0.35
MMP2-208ENST00000570308 PANK1Q8TE04 598 aa12.84□□□□□ -0.35
MMP2-208ENST00000570308 JARID2Q92833 1246 aaPredicted RBP12.84□□□□□ -0.35
MMP2-208ENST00000570308 KIF20BQ96Q89 1820 aa12.84□□□□□ -0.35
MMP2-208ENST00000570308 CD163L1Q9NR16 1453 aa12.84□□□□□ -0.35
MMP2-208ENST00000570308 E9PSI1 815 aa12.84□□□□□ -0.35
MMP2-208ENST00000570308 FBXO31Q5XUX0 539 aaPredicted RBP12.84□□□□□ -0.35
MMP2-208ENST00000570308 CHMP4AQ9BY43 222 aa12.84□□□□□ -0.35
MMP2-208ENST00000570308 FER1L4A9Z1Z3 1794 aa12.84□□□□□ -0.35
MMP2-208ENST00000570308 TNRQ92752 1358 aa12.84□□□□□ -0.35
MMP2-208ENST00000570308 ATP7BP35670 1465 aa12.84□□□□□ -0.35
MMP2-208ENST00000570308 NSD3Q9BZ95 1437 aa12.83□□□□□ -0.36
MMP2-208ENST00000570308 BAG4O95429 457 aaKnown RBP12.83□□□□□ -0.36
MMP2-208ENST00000570308 FEZ1Q99689 392 aa12.83□□□□□ -0.36
MMP2-208ENST00000570308 SSFA2P28290 1259 aa12.83□□□□□ -0.36
MMP2-208ENST00000570308 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
MMP2-208ENST00000570308 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
MMP2-208ENST00000570308 TRMT2AQ8IZ69 625 aaKnown RBP12.82□□□□□ -0.36
MMP2-208ENST00000570308 TRAK1Q9UPV9 953 aa12.82□□□□□ -0.36
MMP2-208ENST00000570308 GABPB1Q06547 395 aaPredicted RBP12.82□□□□□ -0.36
MMP2-208ENST00000570308 BCL2L12Q9HB09 334 aa12.82□□□□□ -0.36
MMP2-208ENST00000570308 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
MMP2-208ENST00000570308 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
MMP2-208ENST00000570308 CLEC17AQ6ZS10 378 aa12.81□□□□□ -0.36
MMP2-208ENST00000570308 SECISBP2LQ93073 1101 aaKnown RBP12.81□□□□□ -0.36
MMP2-208ENST00000570308 TIGD1Q96MW7 591 aa12.81□□□□□ -0.36
MMP2-208ENST00000570308 BRD2P25440 801 aaKnown RBP12.81□□□□□ -0.36
MMP2-208ENST00000570308 U2AF2P26368 475 aaKnown RBP eCLIP12.81□□□□□ -0.36
MMP2-208ENST00000570308 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
MMP2-208ENST00000570308 OGFRQ9NZT2 677 aa12.81□□□□□ -0.36
MMP2-208ENST00000570308 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
MMP2-208ENST00000570308 MON2Q7Z3U7 1717 aa12.8□□□□□ -0.36
MMP2-208ENST00000570308 TMEM132EQ6IEE7 984 aa12.8□□□□□ -0.36
MMP2-208ENST00000570308 RGS22Q8NE09 1264 aa12.8□□□□□ -0.36
MMP2-208ENST00000570308 AKAP12Q02952 1782 aa12.8□□□□□ -0.36
MMP2-208ENST00000570308 IQSEC2Q5JU85 1478 aa12.8□□□□□ -0.36
MMP2-208ENST00000570308 TMEM2Q9UHN6 1383 aa12.8□□□□□ -0.36
MMP2-208ENST00000570308 FAM177BA6PVY3 158 aa12.8□□□□□ -0.36
MMP2-208ENST00000570308 MCTP1Q6DN14 999 aa12.8□□□□□ -0.36
MMP2-208ENST00000570308 PCDHB15Q9Y5E8 787 aa12.8□□□□□ -0.36
MMP2-208ENST00000570308 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.8□□□□□ -0.36
MMP2-208ENST00000570308 PLEKHG1Q9ULL1 1385 aa12.79□□□□□ -0.36
MMP2-208ENST00000570308 ZNF142P52746 1687 aaPredicted RBP12.79□□□□□ -0.36
MMP2-208ENST00000570308 HDGFP51858 240 aaKnown RBP12.79□□□□□ -0.36
MMP2-208ENST00000570308 CHAF1AQ13111 956 aaPredicted RBP12.79□□□□□ -0.36
MMP2-208ENST00000570308 NOLC1Q14978 699 aaKnown RBP eCLIP12.79□□□□□ -0.36
MMP2-208ENST00000570308 PIBF1Q8WXW3 757 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms