RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 NUDCQ9Y266 331 aa20.6■□□□□ 0.89
HERPUD1-219ENST00000570273 HSP90AB2PQ58FF8 381 aa20.59■□□□□ 0.89
HERPUD1-219ENST00000570273 CPDO75976 1380 aa20.58■□□□□ 0.89
HERPUD1-219ENST00000570273 IP6K1Q92551 441 aa20.58■□□□□ 0.88
HERPUD1-219ENST00000570273 YTHDC1Q96MU7 727 aaKnown RBP20.58■□□□□ 0.88
HERPUD1-219ENST00000570273 KIAA0232Q92628 1395 aa20.58■□□□□ 0.88
HERPUD1-219ENST00000570273 U2SURPO15042 1029 aaKnown RBP20.57■□□□□ 0.88
HERPUD1-219ENST00000570273 EIF4A2Q14240 407 aaKnown RBP20.56■□□□□ 0.88
HERPUD1-219ENST00000570273 ABCC6O95255 1503 aa20.56■□□□□ 0.88
HERPUD1-219ENST00000570273 IL13P35225 146 aa20.55■□□□□ 0.88
HERPUD1-219ENST00000570273 PRDM11Q9NQV5 511 aa20.55■□□□□ 0.88
HERPUD1-219ENST00000570273 U2AF1L5P0DN76 240 aaPredicted RBP20.54■□□□□ 0.88
HERPUD1-219ENST00000570273 U2AF1Q01081 240 aaKnown RBP eCLIP20.54■□□□□ 0.88
HERPUD1-219ENST00000570273 ADAMTS8Q9UP79 889 aa20.54■□□□□ 0.88
HERPUD1-219ENST00000570273 BLMP54132 1417 aaPredicted RBP20.54■□□□□ 0.88
HERPUD1-219ENST00000570273 CHRNA2Q15822 529 aa20.53■□□□□ 0.88
HERPUD1-219ENST00000570273 LRP6O75581 1613 aa20.53■□□□□ 0.88
HERPUD1-219ENST00000570273 SPATA31A6Q5VVP1 1343 aa20.53■□□□□ 0.88
HERPUD1-219ENST00000570273 LTV1Q96GA3 475 aaPredicted RBP20.53■□□□□ 0.88
HERPUD1-219ENST00000570273 COL18A1P39060 1754 aa20.5■□□□□ 0.87
HERPUD1-219ENST00000570273 NUTM2BA6NNL0 878 aaPredicted RBP20.49■□□□□ 0.87
HERPUD1-219ENST00000570273 NUTM2EB1AL46 878 aaPredicted RBP20.49■□□□□ 0.87
HERPUD1-219ENST00000570273 NUTM2AQ8IVF1 878 aaPredicted RBP20.49■□□□□ 0.87
HERPUD1-219ENST00000570273 AXIN2Q9Y2T1 843 aa20.49■□□□□ 0.87
HERPUD1-219ENST00000570273 ANKRD24Q8TF21 1146 aa20.48■□□□□ 0.87
HERPUD1-219ENST00000570273 RGPD1P0DJD0 1748 aa20.47■□□□□ 0.87
HERPUD1-219ENST00000570273 LMO7Q8WWI1 1683 aa20.47■□□□□ 0.87
HERPUD1-219ENST00000570273 HNRNPUQ00839 825 aaKnown RBP eCLIP20.47■□□□□ 0.87
HERPUD1-219ENST00000570273 CCDC146Q8IYE0 955 aa20.47■□□□□ 0.87
HERPUD1-219ENST00000570273 ERBB3P21860 1342 aa20.47■□□□□ 0.87
HERPUD1-219ENST00000570273 ADAMTS2O95450 1211 aa20.46■□□□□ 0.87
HERPUD1-219ENST00000570273 HMOX1P09601 288 aa20.46■□□□□ 0.87
HERPUD1-219ENST00000570273 COL14A1Q05707 1796 aaKnown RBP20.46■□□□□ 0.87
HERPUD1-219ENST00000570273 IGSF1Q8N6C5 1336 aa20.46■□□□□ 0.87
HERPUD1-219ENST00000570273 EYA1Q99502 592 aa20.45■□□□□ 0.86
HERPUD1-219ENST00000570273 FAM83GA6ND36 823 aa20.44■□□□□ 0.86
HERPUD1-219ENST00000570273 CSB-PGBD3P0DP91 1061 aa20.44■□□□□ 0.86
HERPUD1-219ENST00000570273 CAMTA1Q9Y6Y1 1673 aa20.44■□□□□ 0.86
HERPUD1-219ENST00000570273 RGPD5Q99666 1765 aa20.44■□□□□ 0.86
HERPUD1-219ENST00000570273 FCHSD2O94868 740 aa20.44■□□□□ 0.86
HERPUD1-219ENST00000570273 SULT6B1Q6IMI4 303 aa20.44■□□□□ 0.86
HERPUD1-219ENST00000570273 RUNDC1Q96C34 613 aa20.44■□□□□ 0.86
HERPUD1-219ENST00000570273 RSPH6AQ9H0K4 717 aa20.44■□□□□ 0.86
HERPUD1-219ENST00000570273 PNNQ9H307 717 aaKnown RBP20.44■□□□□ 0.86
HERPUD1-219ENST00000570273 AEBP1Q8IUX7 1158 aa20.43■□□□□ 0.86
HERPUD1-219ENST00000570273 COL5A2P05997 1499 aaPredicted RBP20.43■□□□□ 0.86
HERPUD1-219ENST00000570273 PRKAR2BP31323 418 aa20.42■□□□□ 0.86
HERPUD1-219ENST00000570273 USHBP1Q8N6Y0 703 aa20.42■□□□□ 0.86
HERPUD1-219ENST00000570273 MAPK8IP3Q9UPT6 1336 aa20.41■□□□□ 0.86
HERPUD1-219ENST00000570273 SENP3-EIF4A1A0A087X0R7 540 aa20.41■□□□□ 0.86
HERPUD1-219ENST00000570273 FAM208AQ9UK61 1670 aaKnown RBP20.4■□□□□ 0.86
HERPUD1-219ENST00000570273 KDRP35968 1356 aa20.4■□□□□ 0.86
HERPUD1-219ENST00000570273 NEFMP07197 916 aa20.4■□□□□ 0.86
HERPUD1-219ENST00000570273 NBPF6Q5VWK0 638 aa20.4■□□□□ 0.86
HERPUD1-219ENST00000570273 NBPF4Q96M43 638 aa20.4■□□□□ 0.86
HERPUD1-219ENST00000570273 NLRP2Q9NX02 1062 aa20.4■□□□□ 0.86
HERPUD1-219ENST00000570273 BTG4Q9NY30 223 aa20.4■□□□□ 0.86
HERPUD1-219ENST00000570273 PLEKHF1Q96S99 279 aa20.39■□□□□ 0.85
HERPUD1-219ENST00000570273 WDR17Q8IZU2 1322 aa20.39■□□□□ 0.85
HERPUD1-219ENST00000570273 PLCH1Q4KWH8 1693 aa20.38■□□□□ 0.85
HERPUD1-219ENST00000570273 APAF1O14727 1248 aa20.38■□□□□ 0.85
HERPUD1-219ENST00000570273 NCAPD2Q15021 1401 aa20.38■□□□□ 0.85
HERPUD1-219ENST00000570273 STRN4Q9NRL3 753 aa20.38■□□□□ 0.85
HERPUD1-219ENST00000570273 RGPD2P0DJD1 1756 aa20.37■□□□□ 0.85
HERPUD1-219ENST00000570273 EVA1CP58658 441 aa20.37■□□□□ 0.85
HERPUD1-219ENST00000570273 RGS17Q9UGC6 210 aaPredicted RBP20.36■□□□□ 0.85
HERPUD1-219ENST00000570273 MEX3CQ5U5Q3 659 aaKnown RBP20.36■□□□□ 0.85
HERPUD1-219ENST00000570273 TOM1L2Q6ZVM7 507 aa20.36■□□□□ 0.85
HERPUD1-219ENST00000570273 TCP11L2Q8N4U5 519 aa20.36■□□□□ 0.85
HERPUD1-219ENST00000570273 SALL2Q9Y467 1007 aaPredicted RBP20.36■□□□□ 0.85
HERPUD1-219ENST00000570273 C8orf37Q96NL8 207 aa20.35■□□□□ 0.85
HERPUD1-219ENST00000570273 ZBED9Q6R2W3 1325 aa20.34■□□□□ 0.85
HERPUD1-219ENST00000570273 SLIT2O94813 1529 aa20.34■□□□□ 0.85
HERPUD1-219ENST00000570273 LARP1Q6PKG0 1096 aaKnown RBP20.34■□□□□ 0.85
HERPUD1-219ENST00000570273 RRP7AQ9Y3A4 280 aaKnown RBP20.34■□□□□ 0.85
HERPUD1-219ENST00000570273 NRAPQ86VF7 1730 aa20.33■□□□□ 0.84
HERPUD1-219ENST00000570273 PHACTR3Q96KR7 559 aa20.33■□□□□ 0.84
HERPUD1-219ENST00000570273 CRB1P82279 1406 aa20.33■□□□□ 0.84
HERPUD1-219ENST00000570273 NWD2Q9ULI1 1742 aa20.32■□□□□ 0.84
HERPUD1-219ENST00000570273 NGLY1Q96IV0 654 aa20.32■□□□□ 0.84
HERPUD1-219ENST00000570273 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
HERPUD1-219ENST00000570273 CARD10Q9BWT7 1032 aa20.31■□□□□ 0.84
HERPUD1-219ENST00000570273 TMPOP42166 694 aaKnown RBP20.3■□□□□ 0.84
HERPUD1-219ENST00000570273 NFE2L2Q16236 605 aa20.3■□□□□ 0.84
HERPUD1-219ENST00000570273 NGEFQ8N5V2 710 aa20.3■□□□□ 0.84
HERPUD1-219ENST00000570273 RAPGEF4Q8WZA2 1011 aa20.29■□□□□ 0.84
HERPUD1-219ENST00000570273 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.29■□□□□ 0.84
HERPUD1-219ENST00000570273 MEGF6O75095 1541 aa20.28■□□□□ 0.84
HERPUD1-219ENST00000570273 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.84
HERPUD1-219ENST00000570273 FNBP4Q8N3X1 1017 aaPredicted RBP20.27■□□□□ 0.84
HERPUD1-219ENST00000570273 PHF23Q9BUL5 403 aaPredicted RBP20.27■□□□□ 0.84
HERPUD1-219ENST00000570273 RIPK4P57078 832 aa20.27■□□□□ 0.83
HERPUD1-219ENST00000570273 UNC5CLQ8IV45 518 aa20.27■□□□□ 0.83
HERPUD1-219ENST00000570273 GAS2L2Q8NHY3 880 aa20.27■□□□□ 0.83
HERPUD1-219ENST00000570273 AFF2P51816 1311 aa20.26■□□□□ 0.83
HERPUD1-219ENST00000570273 MTHFSDQ2M296 383 aaKnown RBP20.26■□□□□ 0.83
HERPUD1-219ENST00000570273 USP35Q9P2H5 1018 aa20.26■□□□□ 0.83
HERPUD1-219ENST00000570273 BCL9LQ86UU0 1499 aa20.26■□□□□ 0.83
HERPUD1-219ENST00000570273 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
HERPUD1-219ENST00000570273 PLEKHO1Q53GL0 409 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms