RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 TNNT2P45379 298 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-212ENST00000570129 UPF1Q92900 1129 aaKnown RBP eCLIP13.61□□□□□ -0.23
GTF3C1-212ENST00000570129 LTV1Q96GA3 475 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-212ENST00000570129 COG3Q96JB2 828 aa13.61□□□□□ -0.23
GTF3C1-212ENST00000570129 NRAPQ86VF7 1730 aa13.61□□□□□ -0.23
GTF3C1-212ENST00000570129 NINLQ9Y2I6 1382 aa13.6□□□□□ -0.23
GTF3C1-212ENST00000570129 KCNH5Q8NCM2 988 aa13.6□□□□□ -0.23
GTF3C1-212ENST00000570129 COL18A1P39060 1754 aa13.6□□□□□ -0.23
GTF3C1-212ENST00000570129 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
GTF3C1-212ENST00000570129 LMO7Q8WWI1 1683 aa13.59□□□□□ -0.23
GTF3C1-212ENST00000570129 A0A0G2JS52 829 aa13.59□□□□□ -0.23
GTF3C1-212ENST00000570129 MYT1Q01538 1121 aa13.59□□□□□ -0.23
GTF3C1-212ENST00000570129 COL5A2P05997 1499 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-212ENST00000570129 EMILIN1Q9Y6C2 1016 aa13.58□□□□□ -0.24
GTF3C1-212ENST00000570129 CCDC7Q96M83 1385 aa13.58□□□□□ -0.24
GTF3C1-212ENST00000570129 CDK12Q9NYV4 1490 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-212ENST00000570129 TOM1L2Q6ZVM7 507 aa13.57□□□□□ -0.24
GTF3C1-212ENST00000570129 CSB-PGBD3P0DP91 1061 aa13.56□□□□□ -0.24
GTF3C1-212ENST00000570129 HOXC9P31274 260 aa13.56□□□□□ -0.24
GTF3C1-212ENST00000570129 HSP90AB2PQ58FF8 381 aa13.56□□□□□ -0.24
GTF3C1-212ENST00000570129 ANKRD24Q8TF21 1146 aa13.56□□□□□ -0.24
GTF3C1-212ENST00000570129 IP6K1Q92551 441 aa13.56□□□□□ -0.24
GTF3C1-212ENST00000570129 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-212ENST00000570129 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
GTF3C1-212ENST00000570129 PER1O15534 1290 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-212ENST00000570129 TCP11L2Q8N4U5 519 aa13.55□□□□□ -0.24
GTF3C1-212ENST00000570129 USHBP1Q8N6Y0 703 aa13.55□□□□□ -0.24
GTF3C1-212ENST00000570129 NLRP2Q9NX02 1062 aa13.55□□□□□ -0.24
GTF3C1-212ENST00000570129 WDR17Q8IZU2 1322 aa13.55□□□□□ -0.24
GTF3C1-212ENST00000570129 RGPD5Q99666 1765 aa13.55□□□□□ -0.24
GTF3C1-212ENST00000570129 PTF1AQ7RTS3 328 aa13.54□□□□□ -0.24
GTF3C1-212ENST00000570129 KRT27Q7Z3Y8 459 aa13.54□□□□□ -0.24
GTF3C1-212ENST00000570129 PPM1GO15355 546 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-212ENST00000570129 AMPHP49418 695 aa13.53□□□□□ -0.24
GTF3C1-212ENST00000570129 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-212ENST00000570129 POLKQ9UBT6 870 aa13.53□□□□□ -0.24
GTF3C1-212ENST00000570129 BRWD3Q6RI45 1802 aa13.53□□□□□ -0.24
GTF3C1-212ENST00000570129 CC2D1BQ5T0F9 858 aaKnown RBP13.52□□□□□ -0.25
GTF3C1-212ENST00000570129 NBPF6Q5VWK0 638 aa13.52□□□□□ -0.25
GTF3C1-212ENST00000570129 BARGINQ6ZT62 677 aa13.52□□□□□ -0.25
GTF3C1-212ENST00000570129 NBPF4Q96M43 638 aa13.52□□□□□ -0.25
GTF3C1-212ENST00000570129 CARD10Q9BWT7 1032 aa13.52□□□□□ -0.25
GTF3C1-212ENST00000570129 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
GTF3C1-212ENST00000570129 CRB1P82279 1406 aa13.52□□□□□ -0.25
GTF3C1-212ENST00000570129 EP400Q96L91 3159 aa13.51□□□□□ -0.25
GTF3C1-212ENST00000570129 ERBB3P21860 1342 aa13.51□□□□□ -0.25
GTF3C1-212ENST00000570129 USP54Q70EL1 1684 aa13.5□□□□□ -0.25
GTF3C1-212ENST00000570129 DEFB132Q7Z7B7 95 aa13.5□□□□□ -0.25
GTF3C1-212ENST00000570129 MARCH10Q8NA82 808 aaPredicted RBP13.5□□□□□ -0.25
GTF3C1-212ENST00000570129 PEAK1Q9H792 1746 aa13.5□□□□□ -0.25
GTF3C1-212ENST00000570129 MORC1Q86VD1 984 aa13.49□□□□□ -0.25
GTF3C1-212ENST00000570129 KNSTRNQ9Y448 316 aa13.49□□□□□ -0.25
GTF3C1-212ENST00000570129 THSD7AQ9UPZ6 1657 aa13.48□□□□□ -0.25
GTF3C1-212ENST00000570129 TRIM37O94972 964 aa13.47□□□□□ -0.25
GTF3C1-212ENST00000570129 LTN1O94822 1766 aa13.47□□□□□ -0.25
GTF3C1-212ENST00000570129 DISP2A7MBM2 1401 aa13.47□□□□□ -0.25
GTF3C1-212ENST00000570129 PDE3BQ13370 1112 aa13.46□□□□□ -0.25
GTF3C1-212ENST00000570129 THRAP3Q9Y2W1 955 aaKnown RBP13.46□□□□□ -0.25
GTF3C1-212ENST00000570129 KIF20BQ96Q89 1820 aa13.45□□□□□ -0.26
GTF3C1-212ENST00000570129 KCNQ2O43526 872 aa13.44□□□□□ -0.26
GTF3C1-212ENST00000570129 DDX10Q13206 875 aaKnown RBP13.44□□□□□ -0.26
GTF3C1-212ENST00000570129 EIF4A2Q14240 407 aaKnown RBP13.44□□□□□ -0.26
GTF3C1-212ENST00000570129 DDB1Q16531 1140 aa13.44□□□□□ -0.26
GTF3C1-212ENST00000570129 EYA1Q99502 592 aa13.44□□□□□ -0.26
GTF3C1-212ENST00000570129 INSRP06213 1382 aa13.44□□□□□ -0.26
GTF3C1-212ENST00000570129 EN1Q05925 392 aaPredicted RBP13.43□□□□□ -0.26
GTF3C1-212ENST00000570129 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
GTF3C1-212ENST00000570129 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
GTF3C1-212ENST00000570129 BLMP54132 1417 aaPredicted RBP13.42□□□□□ -0.26
GTF3C1-212ENST00000570129 EXOC5O00471 708 aa13.42□□□□□ -0.26
GTF3C1-212ENST00000570129 IL2RBP14784 551 aa13.42□□□□□ -0.26
GTF3C1-212ENST00000570129 MTHFSP49914 203 aa13.42□□□□□ -0.26
GTF3C1-212ENST00000570129 ACSBG1Q96GR2 724 aa13.42□□□□□ -0.26
GTF3C1-212ENST00000570129 FLT4P35916 1363 aa13.42□□□□□ -0.26
GTF3C1-212ENST00000570129 MEGF6O75095 1541 aa13.41□□□□□ -0.26
GTF3C1-212ENST00000570129 AEBP1Q8IUX7 1158 aa13.41□□□□□ -0.26
GTF3C1-212ENST00000570129 FAM196AQ6ZSG2 479 aa13.4□□□□□ -0.26
GTF3C1-212ENST00000570129 RTL1A6NKG5 1358 aa13.4□□□□□ -0.26
GTF3C1-212ENST00000570129 EZH2Q15910 746 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-212ENST00000570129 ABCC6O95255 1503 aa13.39□□□□□ -0.27
GTF3C1-212ENST00000570129 APBA3O96018 575 aa13.38□□□□□ -0.27
GTF3C1-212ENST00000570129 IL13P35225 146 aa13.38□□□□□ -0.27
GTF3C1-212ENST00000570129 MAP2P11137 1827 aaKnown RBP13.38□□□□□ -0.27
GTF3C1-212ENST00000570129 LRRC37A3O60309 1634 aa13.38□□□□□ -0.27
GTF3C1-212ENST00000570129 FAM208AQ9UK61 1670 aaKnown RBP13.37□□□□□ -0.27
GTF3C1-212ENST00000570129 NSD2O96028 1365 aa13.37□□□□□ -0.27
GTF3C1-212ENST00000570129 ZCRB1Q8TBF4 217 aaKnown RBP13.37□□□□□ -0.27
GTF3C1-212ENST00000570129 CYP27B1O15528 508 aa13.36□□□□□ -0.27
GTF3C1-212ENST00000570129 PROM2Q8N271 834 aa13.36□□□□□ -0.27
GTF3C1-212ENST00000570129 CAMKK2Q96RR4 588 aa13.36□□□□□ -0.27
GTF3C1-212ENST00000570129 CDCA7Q9BWT1 371 aaPredicted RBP13.36□□□□□ -0.27
GTF3C1-212ENST00000570129 PARP4Q9UKK3 1724 aaKnown RBP13.36□□□□□ -0.27
GTF3C1-212ENST00000570129 PPP2R1AP30153 589 aa13.35□□□□□ -0.27
GTF3C1-212ENST00000570129 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
GTF3C1-212ENST00000570129 HMOX1P09601 288 aa13.34□□□□□ -0.27
GTF3C1-212ENST00000570129 TATP17735 454 aaPredicted RBP13.34□□□□□ -0.27
GTF3C1-212ENST00000570129 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
GTF3C1-212ENST00000570129 KCNQ4P56696 695 aa13.34□□□□□ -0.27
GTF3C1-212ENST00000570129 CCDC125Q86Z20 511 aa13.34□□□□□ -0.27
GTF3C1-212ENST00000570129 RAPGEF4Q8WZA2 1011 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms