RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 FBLN1P23142 703 aa31.57■■■□□ 2.64
RAB40C-212ENST00000569575 COL18A1P39060 1754 aa31.57■■■□□ 2.64
RAB40C-212ENST00000569575 LRP6O75581 1613 aa31.57■■■□□ 2.64
RAB40C-212ENST00000569575 MEX3CQ5U5Q3 659 aaKnown RBP31.56■■■□□ 2.64
RAB40C-212ENST00000569575 FNBP4Q8N3X1 1017 aaPredicted RBP31.55■■■□□ 2.64
RAB40C-212ENST00000569575 NWD2Q9ULI1 1742 aa31.55■■■□□ 2.64
RAB40C-212ENST00000569575 LMO7Q8WWI1 1683 aa31.54■■■□□ 2.64
RAB40C-212ENST00000569575 PPM1GO15355 546 aaPredicted RBP31.54■■■□□ 2.64
RAB40C-212ENST00000569575 NGLY1Q96IV0 654 aa31.53■■■□□ 2.64
RAB40C-212ENST00000569575 SLIT2O94813 1529 aa31.51■■■□□ 2.63
RAB40C-212ENST00000569575 CHRNA2Q15822 529 aa31.51■■■□□ 2.63
RAB40C-212ENST00000569575 PEAK1Q9H792 1746 aa31.51■■■□□ 2.63
RAB40C-212ENST00000569575 ZBTB7CA1YPR0 619 aa31.5■■■□□ 2.63
RAB40C-212ENST00000569575 CCER2I3L3R5 266 aa31.5■■■□□ 2.63
RAB40C-212ENST00000569575 HSP90AB2PQ58FF8 381 aa31.49■■■□□ 2.63
RAB40C-212ENST00000569575 CAMTA1Q9Y6Y1 1673 aa31.48■■■□□ 2.63
RAB40C-212ENST00000569575 C8orf37Q96NL8 207 aa31.48■■■□□ 2.63
RAB40C-212ENST00000569575 BTG4Q9NY30 223 aa31.48■■■□□ 2.63
RAB40C-212ENST00000569575 AXIN2Q9Y2T1 843 aa31.48■■■□□ 2.63
RAB40C-212ENST00000569575 DIAPH1O60610 1272 aaKnown RBP31.47■■■□□ 2.63
RAB40C-212ENST00000569575 EVA1CP58658 441 aa31.47■■■□□ 2.63
RAB40C-212ENST00000569575 NUDCQ9Y266 331 aa31.47■■■□□ 2.63
RAB40C-212ENST00000569575 PLCH1Q4KWH8 1693 aa31.47■■■□□ 2.63
RAB40C-212ENST00000569575 ERBB3P21860 1342 aa31.47■■■□□ 2.63
RAB40C-212ENST00000569575 FAM208AQ9UK61 1670 aaKnown RBP31.45■■■□□ 2.63
RAB40C-212ENST00000569575 COL5A2P05997 1499 aaPredicted RBP31.45■■■□□ 2.62
RAB40C-212ENST00000569575 UNC5CLQ8IV45 518 aa31.44■■■□□ 2.62
RAB40C-212ENST00000569575 ANKRD24Q8TF21 1146 aa31.44■■■□□ 2.62
RAB40C-212ENST00000569575 WDR17Q8IZU2 1322 aa31.44■■■□□ 2.62
RAB40C-212ENST00000569575 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.43■■■□□ 2.62
RAB40C-212ENST00000569575 RGPD5Q99666 1765 aa31.42■■■□□ 2.62
RAB40C-212ENST00000569575 COL3A1P02461 1466 aaPredicted RBP31.41■■■□□ 2.62
RAB40C-212ENST00000569575 IL13P35225 146 aa31.41■■■□□ 2.62
RAB40C-212ENST00000569575 EIF4A2Q14240 407 aaKnown RBP31.4■■■□□ 2.62
RAB40C-212ENST00000569575 ZNF772Q68DY9 489 aaPredicted RBP31.4■■■□□ 2.62
RAB40C-212ENST00000569575 USP21Q9UK80 565 aa31.4■■■□□ 2.62
RAB40C-212ENST00000569575 BCL9LQ86UU0 1499 aa31.4■■■□□ 2.62
RAB40C-212ENST00000569575 CSB-PGBD3P0DP91 1061 aa31.39■■■□□ 2.62
RAB40C-212ENST00000569575 NRAPQ86VF7 1730 aa31.38■■■□□ 2.61
RAB40C-212ENST00000569575 AFF2P51816 1311 aa31.38■■■□□ 2.61
RAB40C-212ENST00000569575 MIER1Q8N108 512 aa31.37■■■□□ 2.61
RAB40C-212ENST00000569575 CRB1P82279 1406 aa31.37■■■□□ 2.61
RAB40C-212ENST00000569575 VPS72Q15906 364 aa31.36■■■□□ 2.61
RAB40C-212ENST00000569575 CARD10Q9BWT7 1032 aa31.36■■■□□ 2.61
RAB40C-212ENST00000569575 MRS2Q9HD23 443 aa31.36■■■□□ 2.61
RAB40C-212ENST00000569575 THRAP3Q9Y2W1 955 aaKnown RBP31.35■■■□□ 2.61
RAB40C-212ENST00000569575 PLEKHG2Q9H7P9 1386 aa31.34■■■□□ 2.61
RAB40C-212ENST00000569575 TOM1L2Q6ZVM7 507 aa31.34■■■□□ 2.61
RAB40C-212ENST00000569575 STRN4Q9NRL3 753 aa31.34■■■□□ 2.61
RAB40C-212ENST00000569575 TRPC5Q9UL62 973 aaPredicted RBP31.34■■■□□ 2.61
RAB40C-212ENST00000569575 LTV1Q96GA3 475 aaPredicted RBP31.33■■■□□ 2.61
RAB40C-212ENST00000569575 PNNQ9H307 717 aaKnown RBP31.33■■■□□ 2.61
RAB40C-212ENST00000569575 IGSF1Q8N6C5 1336 aa31.32■■■□□ 2.6
RAB40C-212ENST00000569575 NLRP2Q9NX02 1062 aa31.32■■■□□ 2.6
RAB40C-212ENST00000569575 NCAPD2Q15021 1401 aa31.32■■■□□ 2.6
RAB40C-212ENST00000569575 EYA1Q99502 592 aa31.31■■■□□ 2.6
RAB40C-212ENST00000569575 LARP1Q6PKG0 1096 aaKnown RBP31.3■■■□□ 2.6
RAB40C-212ENST00000569575 RGPD1P0DJD0 1748 aa31.29■■■□□ 2.6
RAB40C-212ENST00000569575 SPATA31A5Q5VU36 1347 aa31.29■■■□□ 2.6
RAB40C-212ENST00000569575 SPATA31A7Q8IWB4 1347 aa31.29■■■□□ 2.6
RAB40C-212ENST00000569575 WDR43Q15061 677 aaKnown RBP eCLIP31.29■■■□□ 2.6
RAB40C-212ENST00000569575 NBPF6Q5VWK0 638 aa31.29■■■□□ 2.6
RAB40C-212ENST00000569575 NBPF4Q96M43 638 aa31.29■■■□□ 2.6
RAB40C-212ENST00000569575 CDCA7Q9BWT1 371 aaPredicted RBP31.29■■■□□ 2.6
RAB40C-212ENST00000569575 FCHSD2O94868 740 aa31.28■■■□□ 2.6
RAB40C-212ENST00000569575 KDRP35968 1356 aa31.28■■■□□ 2.6
RAB40C-212ENST00000569575 SPATA31A1Q5TZJ5 1347 aa31.27■■■□□ 2.6
RAB40C-212ENST00000569575 ATRNO75882 1429 aa31.27■■■□□ 2.6
RAB40C-212ENST00000569575 U2SURPO15042 1029 aaKnown RBP31.27■■■□□ 2.6
RAB40C-212ENST00000569575 PNISRQ8TF01 805 aaKnown RBP31.27■■■□□ 2.6
RAB40C-212ENST00000569575 TCP11L2Q8N4U5 519 aa31.26■■■□□ 2.59
RAB40C-212ENST00000569575 U2AF1L5P0DN76 240 aaPredicted RBP31.25■■■□□ 2.59
RAB40C-212ENST00000569575 U2AF1Q01081 240 aaKnown RBP eCLIP31.25■■■□□ 2.59
RAB40C-212ENST00000569575 BARGINQ6ZT62 677 aa31.25■■■□□ 2.59
RAB40C-212ENST00000569575 PHF23Q9BUL5 403 aaPredicted RBP31.24■■■□□ 2.59
RAB40C-212ENST00000569575 QTRT2Q9H974 415 aaKnown RBP31.24■■■□□ 2.59
RAB40C-212ENST00000569575 CCDC184Q52MB2 194 aa31.23■■■□□ 2.59
RAB40C-212ENST00000569575 GJD4Q96KN9 370 aaPredicted RBP31.23■■■□□ 2.59
RAB40C-212ENST00000569575 CCDC9Q9Y3X0 531 aaKnown RBP31.22■■■□□ 2.59
RAB40C-212ENST00000569575 SULT6B1Q6IMI4 303 aa31.21■■■□□ 2.59
RAB40C-212ENST00000569575 RGPD2P0DJD1 1756 aa31.2■■■□□ 2.59
RAB40C-212ENST00000569575 RAPGEF4Q8WZA2 1011 aa31.2■■■□□ 2.59
RAB40C-212ENST00000569575 NEFMP07197 916 aa31.19■■■□□ 2.58
RAB40C-212ENST00000569575 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.18■■■□□ 2.58
RAB40C-212ENST00000569575 ONECUT3O60422 494 aaPredicted RBP31.17■■■□□ 2.58
RAB40C-212ENST00000569575 IL2RBP14784 551 aa31.17■■■□□ 2.58
RAB40C-212ENST00000569575 RBM6P78332 1123 aaKnown RBP31.17■■■□□ 2.58
RAB40C-212ENST00000569575 TATP17735 454 aaPredicted RBP31.15■■■□□ 2.58
RAB40C-212ENST00000569575 RSPH6AQ9H0K4 717 aa31.15■■■□□ 2.58
RAB40C-212ENST00000569575 ADAMTS8Q9UP79 889 aa31.15■■■□□ 2.58
RAB40C-212ENST00000569575 AMOTQ4VCS5 1084 aa31.14■■■□□ 2.58
RAB40C-212ENST00000569575 USP35Q9P2H5 1018 aa31.13■■■□□ 2.57
RAB40C-212ENST00000569575 HMOX1P09601 288 aa31.12■■■□□ 2.57
RAB40C-212ENST00000569575 RGS17Q9UGC6 210 aaPredicted RBP31.12■■■□□ 2.57
RAB40C-212ENST00000569575 DISP2A7MBM2 1401 aa31.12■■■□□ 2.57
RAB40C-212ENST00000569575 USHBP1Q8N6Y0 703 aa31.11■■■□□ 2.57
RAB40C-212ENST00000569575 PARP4Q9UKK3 1724 aaKnown RBP31.11■■■□□ 2.57
RAB40C-212ENST00000569575 RXRBP28702 533 aa31.1■■■□□ 2.57
RAB40C-212ENST00000569575 PLEKHO1Q53GL0 409 aaPredicted RBP31.1■■■□□ 2.57
RAB40C-212ENST00000569575 AEBP1Q8IUX7 1158 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms