RNA–Protein interactions for RNA: ENST00000569388.5

NAE1-221, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-221ENST00000569388 SPATA31A5Q5VU36 1347 aa29.29■■■□□ 2.28
NAE1-221ENST00000569388 SPATA31A7Q8IWB4 1347 aa29.29■■■□□ 2.28
NAE1-221ENST00000569388 LARP1Q6PKG0 1096 aaKnown RBP29.29■■■□□ 2.28
NAE1-221ENST00000569388 PANK3Q9H999 370 aa29.29■■■□□ 2.28
NAE1-221ENST00000569388 AXIN2Q9Y2T1 843 aa29.29■■■□□ 2.28
NAE1-221ENST00000569388 ABCC6O95255 1503 aa29.28■■■□□ 2.28
NAE1-221ENST00000569388 ANKRD26Q9UPS8 1709 aa29.28■■■□□ 2.28
NAE1-221ENST00000569388 FBLN1P23142 703 aa29.26■■■□□ 2.27
NAE1-221ENST00000569388 FAM98CQ17RN3 349 aaKnown RBP29.26■■■□□ 2.27
NAE1-221ENST00000569388 USP35Q9P2H5 1018 aa29.26■■■□□ 2.27
NAE1-221ENST00000569388 CCDC7Q96M83 1385 aa29.26■■■□□ 2.27
NAE1-221ENST00000569388 SPATA31A1Q5TZJ5 1347 aa29.25■■■□□ 2.27
NAE1-221ENST00000569388 THSD7AQ9UPZ6 1657 aa29.25■■■□□ 2.27
NAE1-221ENST00000569388 CGNL1Q0VF96 1302 aa29.23■■■□□ 2.27
NAE1-221ENST00000569388 WASHC2AQ641Q2 1341 aa29.23■■■□□ 2.27
NAE1-221ENST00000569388 A0A0G2JS52 829 aa29.23■■■□□ 2.27
NAE1-221ENST00000569388 MYT1Q01538 1121 aa29.23■■■□□ 2.27
NAE1-221ENST00000569388 SEPT12Q8IYM1 358 aa29.22■■■□□ 2.27
NAE1-221ENST00000569388 CRB1P82279 1406 aa29.2■■■□□ 2.27
NAE1-221ENST00000569388 WNK3Q9BYP7 1800 aa29.2■■■□□ 2.27
NAE1-221ENST00000569388 MAP3K19Q56UN5 1328 aa29.2■■■□□ 2.26
NAE1-221ENST00000569388 PEAK1Q9H792 1746 aa29.18■■■□□ 2.26
NAE1-221ENST00000569388 RRS1Q15050 365 aaKnown RBP29.18■■■□□ 2.26
NAE1-221ENST00000569388 WDR17Q8IZU2 1322 aa29.18■■■□□ 2.26
NAE1-221ENST00000569388 ONECUT3O60422 494 aaPredicted RBP29.17■■■□□ 2.26
NAE1-221ENST00000569388 CSB-PGBD3P0DP91 1061 aa29.17■■■□□ 2.26
NAE1-221ENST00000569388 TOM1L2Q6ZVM7 507 aa29.17■■■□□ 2.26
NAE1-221ENST00000569388 EP400Q96L91 3159 aa29.16■■■□□ 2.26
NAE1-221ENST00000569388 TCP11L2Q8N4U5 519 aa29.14■■■□□ 2.26
NAE1-221ENST00000569388 MAP2P11137 1827 aaKnown RBP29.13■■■□□ 2.25
NAE1-221ENST00000569388 BLMP54132 1417 aaPredicted RBP29.13■■■□□ 2.25
NAE1-221ENST00000569388 AMPHP49418 695 aa29.13■■■□□ 2.25
NAE1-221ENST00000569388 ERBB3P21860 1342 aa29.13■■■□□ 2.25
NAE1-221ENST00000569388 RGPD2P0DJD1 1756 aa29.12■■■□□ 2.25
NAE1-221ENST00000569388 IP6K1Q92551 441 aa29.12■■■□□ 2.25
NAE1-221ENST00000569388 FAM208AQ9UK61 1670 aaKnown RBP29.12■■■□□ 2.25
NAE1-221ENST00000569388 PARP4Q9UKK3 1724 aaKnown RBP29.11■■■□□ 2.25
NAE1-221ENST00000569388 HOXC9P31274 260 aa29.11■■■□□ 2.25
NAE1-221ENST00000569388 ANKRD24Q8TF21 1146 aa29.11■■■□□ 2.25
NAE1-221ENST00000569388 KNSTRNQ9Y448 316 aa29.11■■■□□ 2.25
NAE1-221ENST00000569388 BARGINQ6ZT62 677 aa29.1■■■□□ 2.25
NAE1-221ENST00000569388 LTV1Q96GA3 475 aaPredicted RBP29.1■■■□□ 2.25
NAE1-221ENST00000569388 RTL1A6NKG5 1358 aa29.1■■■□□ 2.25
NAE1-221ENST00000569388 LRRC37A3O60309 1634 aa29.09■■■□□ 2.25
NAE1-221ENST00000569388 TNNT2P45379 298 aaPredicted RBP29.09■■■□□ 2.25
NAE1-221ENST00000569388 KRT27Q7Z3Y8 459 aa29.08■■■□□ 2.25
NAE1-221ENST00000569388 NSD2O96028 1365 aa29.08■■■□□ 2.25
NAE1-221ENST00000569388 UPF1Q92900 1129 aaKnown RBP eCLIP29.07■■■□□ 2.24
NAE1-221ENST00000569388 THRAP3Q9Y2W1 955 aaKnown RBP29.07■■■□□ 2.24
NAE1-221ENST00000569388 EMILIN1Q9Y6C2 1016 aa29.07■■■□□ 2.24
NAE1-221ENST00000569388 CARD10Q9BWT7 1032 aa29.06■■■□□ 2.24
NAE1-221ENST00000569388 NLRP2Q9NX02 1062 aa29.06■■■□□ 2.24
NAE1-221ENST00000569388 FLT4P35916 1363 aa29.04■■■□□ 2.24
NAE1-221ENST00000569388 FAM182BQ5T319 152 aa29.04■■■□□ 2.24
NAE1-221ENST00000569388 PPM1GO15355 546 aaPredicted RBP29.03■■■□□ 2.24
NAE1-221ENST00000569388 ZEB1P37275 1124 aaPredicted RBP29.03■■■□□ 2.24
NAE1-221ENST00000569388 AMER1Q5JTC6 1135 aaPredicted RBP29.03■■■□□ 2.24
NAE1-221ENST00000569388 PER1O15534 1290 aaPredicted RBP29.01■■■□□ 2.23
NAE1-221ENST00000569388 HSP90AB2PQ58FF8 381 aa29.01■■■□□ 2.23
NAE1-221ENST00000569388 MORC1Q86VD1 984 aa29.01■■■□□ 2.23
NAE1-221ENST00000569388 DISP2A7MBM2 1401 aa29.01■■■□□ 2.23
NAE1-221ENST00000569388 KIF24Q5T7B8 1368 aa29■■■□□ 2.23
NAE1-221ENST00000569388 CNGB1Q14028 1251 aaPredicted RBP28.99■■■□□ 2.23
NAE1-221ENST00000569388 INSRP06213 1382 aa28.99■■■□□ 2.23
NAE1-221ENST00000569388 SMG6Q86US8 1419 aaKnown RBP28.98■■■□□ 2.23
NAE1-221ENST00000569388 CC2D1BQ5T0F9 858 aaKnown RBP28.98■■■□□ 2.23
NAE1-221ENST00000569388 POLKQ9UBT6 870 aa28.98■■■□□ 2.23
NAE1-221ENST00000569388 PDE3BQ13370 1112 aa28.95■■■□□ 2.22
NAE1-221ENST00000569388 DDB1Q16531 1140 aa28.93■■■□□ 2.22
NAE1-221ENST00000569388 USHBP1Q8N6Y0 703 aa28.92■■■□□ 2.22
NAE1-221ENST00000569388 CDCA7Q9BWT1 371 aaPredicted RBP28.92■■■□□ 2.22
NAE1-221ENST00000569388 NBPF6Q5VWK0 638 aa28.91■■■□□ 2.22
NAE1-221ENST00000569388 NBPF4Q96M43 638 aa28.91■■■□□ 2.22
NAE1-221ENST00000569388 TNS2Q63HR2 1409 aa28.91■■■□□ 2.22
NAE1-221ENST00000569388 RGPD1P0DJD0 1748 aa28.91■■■□□ 2.22
NAE1-221ENST00000569388 IL2RBP14784 551 aa28.9■■■□□ 2.22
NAE1-221ENST00000569388 TNS1Q9HBL0 1735 aaKnown RBP28.9■■■□□ 2.22
NAE1-221ENST00000569388 MEGF6O75095 1541 aa28.88■■■□□ 2.21
NAE1-221ENST00000569388 NPC1L1Q9UHC9 1359 aa28.88■■■□□ 2.21
NAE1-221ENST00000569388 SHANK3Q9BYB0 1731 aa28.86■■■□□ 2.21
NAE1-221ENST00000569388 OVOS2A0A0G2JMS6 1433 aa28.86■■■□□ 2.21
NAE1-221ENST00000569388 SBF2Q86WG5 1849 aa28.85■■■□□ 2.21
NAE1-221ENST00000569388 EXOC5O00471 708 aa28.84■■■□□ 2.21
NAE1-221ENST00000569388 FAM196AQ6ZSG2 479 aa28.84■■■□□ 2.21
NAE1-221ENST00000569388 EIF4A2Q14240 407 aaKnown RBP28.83■■■□□ 2.21
NAE1-221ENST00000569388 MARCH10Q8NA82 808 aaPredicted RBP28.83■■■□□ 2.21
NAE1-221ENST00000569388 TRIM37O94972 964 aa28.8■■■□□ 2.2
NAE1-221ENST00000569388 CCDC125Q86Z20 511 aa28.8■■■□□ 2.2
NAE1-221ENST00000569388 SF3B2Q13435 895 aaKnown RBP28.79■■■□□ 2.2
NAE1-221ENST00000569388 NCAPD2Q15021 1401 aa28.78■■■□□ 2.2
NAE1-221ENST00000569388 EYA1Q99502 592 aa28.78■■■□□ 2.2
NAE1-221ENST00000569388 MTHFSP49914 203 aa28.77■■■□□ 2.2
NAE1-221ENST00000569388 DEFB132Q7Z7B7 95 aa28.77■■■□□ 2.2
NAE1-221ENST00000569388 DDX10Q13206 875 aaKnown RBP28.76■■■□□ 2.19
NAE1-221ENST00000569388 RAPGEF4Q8WZA2 1011 aa28.76■■■□□ 2.19
NAE1-221ENST00000569388 PKD1L3Q7Z443 1732 aa28.75■■■□□ 2.19
NAE1-221ENST00000569388 TATP17735 454 aaPredicted RBP28.73■■■□□ 2.19
NAE1-221ENST00000569388 DDX54Q8TDD1 881 aaKnown RBP28.73■■■□□ 2.19
NAE1-221ENST00000569388 NHSQ6T4R5 1651 aa28.73■■■□□ 2.19
NAE1-221ENST00000569388 DOT1LQ8TEK3 1739 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms