RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 MSNP26038 577 aaKnown RBP8.04□□□□□ -1.12
KARS-211ENST00000569298 RPAINQ86UA6 219 aa8.04□□□□□ -1.12
KARS-211ENST00000569298 SLF2Q8IX21 1173 aa8.04□□□□□ -1.12
KARS-211ENST00000569298 PDCL2Q8N4E4 241 aa8.04□□□□□ -1.12
KARS-211ENST00000569298 RBM46Q8TBY0 533 aaKnown RBP8.04□□□□□ -1.12
KARS-211ENST00000569298 NECTIN2Q92692 538 aa8.04□□□□□ -1.12
KARS-211ENST00000569298 MKL1Q969V6 931 aa8.04□□□□□ -1.12
KARS-211ENST00000569298 SMC4Q9NTJ3 1288 aa8.04□□□□□ -1.12
KARS-211ENST00000569298 SMARCA2P51531 1590 aa8.03□□□□□ -1.12
KARS-211ENST00000569298 KCNJ4P48050 445 aa8.03□□□□□ -1.12
KARS-211ENST00000569298 OS9Q13438 667 aaPredicted RBP8.03□□□□□ -1.12
KARS-211ENST00000569298 SETDB1Q15047 1291 aa8.03□□□□□ -1.12
KARS-211ENST00000569298 NBPF6Q5VWK0 638 aa8.03□□□□□ -1.12
KARS-211ENST00000569298 NBPF5PQ86XG9 351 aaPredicted RBP8.03□□□□□ -1.12
KARS-211ENST00000569298 NBPF4Q96M43 638 aa8.03□□□□□ -1.12
KARS-211ENST00000569298 NOL7Q9UMY1 257 aaKnown RBP8.03□□□□□ -1.12
KARS-211ENST00000569298 RNF40O75150 1001 aa8.02□□□□□ -1.13
KARS-211ENST00000569298 UBTFP17480 764 aaKnown RBP8.02□□□□□ -1.13
KARS-211ENST00000569298 FECHP22830 423 aa8.02□□□□□ -1.13
KARS-211ENST00000569298 DNAJB2P25686 324 aa8.02□□□□□ -1.13
KARS-211ENST00000569298 TTLL12Q14166 644 aaPredicted RBP8.02□□□□□ -1.13
KARS-211ENST00000569298 AMHR2Q16671 573 aa8.02□□□□□ -1.13
KARS-211ENST00000569298 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.02□□□□□ -1.13
KARS-211ENST00000569298 DONSONQ9NYP3 566 aa8.02□□□□□ -1.13
KARS-211ENST00000569298 NUDCQ9Y266 331 aa8.02□□□□□ -1.13
KARS-211ENST00000569298 NRDCO43847 1150 aa8.01□□□□□ -1.13
KARS-211ENST00000569298 SKOR2Q2VWA4 1001 aaPredicted RBP8.01□□□□□ -1.13
KARS-211ENST00000569298 TJAP1Q5JTD0 557 aa8.01□□□□□ -1.13
KARS-211ENST00000569298 MYRIPQ8NFW9 859 aa8.01□□□□□ -1.13
KARS-211ENST00000569298 FAM210AQ96ND0 272 aa8.01□□□□□ -1.13
KARS-211ENST00000569298 TMEM134Q9H6X4 195 aa8.01□□□□□ -1.13
KARS-211ENST00000569298 PRDM16Q9HAZ2 1276 aa8.01□□□□□ -1.13
KARS-211ENST00000569298 MED4Q9NPJ6 270 aa8.01□□□□□ -1.13
KARS-211ENST00000569298 KIF16BQ96L93 1317 aa8.01□□□□□ -1.13
KARS-211ENST00000569298 ATAD2BQ9ULI0 1458 aa8□□□□□ -1.13
KARS-211ENST00000569298 NEFHP12036 1026 aa8□□□□□ -1.13
KARS-211ENST00000569298 SLC4A3P48751 1232 aa8□□□□□ -1.13
KARS-211ENST00000569298 APLP1P51693 650 aa8□□□□□ -1.13
KARS-211ENST00000569298 TRDNQ13061 729 aa8□□□□□ -1.13
KARS-211ENST00000569298 FAM161AQ3B820 660 aa8□□□□□ -1.13
KARS-211ENST00000569298 CERS3Q8IU89 383 aa8□□□□□ -1.13
KARS-211ENST00000569298 PARP9Q8IXQ6 854 aa8□□□□□ -1.13
KARS-211ENST00000569298 NGEFQ8N5V2 710 aa8□□□□□ -1.13
KARS-211ENST00000569298 SLC26A8Q96RN1 970 aa8□□□□□ -1.13
KARS-211ENST00000569298 FAM117AQ9C073 453 aa8□□□□□ -1.13
KARS-211ENST00000569298 OGFRQ9NZT2 677 aa8□□□□□ -1.13
KARS-211ENST00000569298 KNSTRNQ9Y448 316 aa8□□□□□ -1.13
KARS-211ENST00000569298 RCCD1A6NED2 376 aa7.99□□□□□ -1.13
KARS-211ENST00000569298 DDX11L8A8MPP1 907 aa7.99□□□□□ -1.13
KARS-211ENST00000569298 GOLIM4O00461 696 aa7.99□□□□□ -1.13
KARS-211ENST00000569298 OATP04181 439 aa7.99□□□□□ -1.13
KARS-211ENST00000569298 PXYLP1Q8TE99 480 aa7.99□□□□□ -1.13
KARS-211ENST00000569298 R3HCC1Q9Y3T6 440 aaKnown RBP7.99□□□□□ -1.13
KARS-211ENST00000569298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.98□□□□□ -1.13
KARS-211ENST00000569298 PLEKHD1A6NEE1 506 aa7.98□□□□□ -1.13
KARS-211ENST00000569298 E9PSI1 815 aa7.98□□□□□ -1.13
KARS-211ENST00000569298 HSP90AB1P08238 724 aaKnown RBP7.98□□□□□ -1.13
KARS-211ENST00000569298 MCM4P33991 863 aa7.98□□□□□ -1.13
KARS-211ENST00000569298 MTRQ99707 1265 aa7.98□□□□□ -1.13
KARS-211ENST00000569298 IL21Q9HBE4 155 aa7.98□□□□□ -1.13
KARS-211ENST00000569298 ZNF853P0CG23 659 aa7.97□□□□□ -1.13
KARS-211ENST00000569298 GUCY2CP25092 1073 aa7.97□□□□□ -1.13
KARS-211ENST00000569298 NOP2P46087 812 aaKnown RBP7.97□□□□□ -1.13
KARS-211ENST00000569298 GTF2A1P52655 376 aaPredicted RBP7.97□□□□□ -1.13
KARS-211ENST00000569298 SYCP1Q15431 976 aa7.97□□□□□ -1.13
KARS-211ENST00000569298 ZNF771Q7L3S4 317 aaPredicted RBP7.97□□□□□ -1.13
KARS-211ENST00000569298 TMC1Q8TDI8 760 aa7.97□□□□□ -1.13
KARS-211ENST00000569298 ITFG2Q969R8 447 aa7.97□□□□□ -1.13
KARS-211ENST00000569298 PANK2Q9BZ23 570 aa7.97□□□□□ -1.13
KARS-211ENST00000569298 ANTXR1Q9H6X2 564 aa7.97□□□□□ -1.13
KARS-211ENST00000569298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.97□□□□□ -1.13
KARS-211ENST00000569298 CEP164Q9UPV0 1460 aa7.97□□□□□ -1.13
KARS-211ENST00000569298 SMARCA4P51532 1647 aa7.96□□□□□ -1.13
KARS-211ENST00000569298 RSF1Q96T23 1441 aaPredicted RBP7.96□□□□□ -1.13
KARS-211ENST00000569298 ERCC6Q03468 1493 aa7.96□□□□□ -1.13
KARS-211ENST00000569298 LOC102724159A0A0B4J2E5 919 aa7.96□□□□□ -1.14
KARS-211ENST00000569298 SEMA3FQ13275 785 aa7.96□□□□□ -1.14
KARS-211ENST00000569298 PWP2Q15269 919 aaKnown RBP7.96□□□□□ -1.14
KARS-211ENST00000569298 ICE2Q659A1 982 aa7.96□□□□□ -1.14
KARS-211ENST00000569298 METTL3Q86U44 580 aaKnown RBP7.96□□□□□ -1.14
KARS-211ENST00000569298 PRR14Q9BWN1 585 aa7.96□□□□□ -1.14
KARS-211ENST00000569298 TRIM34Q9BYJ4 488 aa7.96□□□□□ -1.14
KARS-211ENST00000569298 BAZ1AQ9NRL2 1556 aaPredicted RBP7.96□□□□□ -1.14
KARS-211ENST00000569298 HMGXB3Q12766 1538 aa7.95□□□□□ -1.14
KARS-211ENST00000569298 PPP1R12AO14974 1030 aaPredicted RBP7.95□□□□□ -1.14
KARS-211ENST00000569298 TRAK2O60296 914 aa7.95□□□□□ -1.14
KARS-211ENST00000569298 CAPN2P17655 700 aa7.95□□□□□ -1.14
KARS-211ENST00000569298 TNNT3P45378 269 aaPredicted RBP7.95□□□□□ -1.14
KARS-211ENST00000569298 SIRT1Q96EB6 747 aa7.95□□□□□ -1.14
KARS-211ENST00000569298 PAIP2Q9BPZ3 127 aaKnown RBP7.95□□□□□ -1.14
KARS-211ENST00000569298 FEZ2Q9UHY8 353 aaPredicted RBP7.95□□□□□ -1.14
KARS-211ENST00000569298 PLEKHG3A1L390 1219 aa7.94□□□□□ -1.14
KARS-211ENST00000569298 SLFN14P0C7P3 912 aa7.94□□□□□ -1.14
KARS-211ENST00000569298 LIG1P18858 919 aa7.94□□□□□ -1.14
KARS-211ENST00000569298 CBX1P83916 185 aa7.94□□□□□ -1.14
KARS-211ENST00000569298 MTA1Q13330 715 aa7.94□□□□□ -1.14
KARS-211ENST00000569298 HSP90AB4PQ58FF6 505 aa7.94□□□□□ -1.14
KARS-211ENST00000569298 TACO1Q9BSH4 297 aaKnown RBP7.94□□□□□ -1.14
KARS-211ENST00000569298 BAZ1BQ9UIG0 1483 aaKnown RBP7.94□□□□□ -1.14
KARS-211ENST00000569298 KLHL33A6NCF5 533 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms