RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 USP35Q9P2H5 1018 aa16.28■□□□□ 0.2
CHRFAM7A-206ENST00000569278 UTRNP46939 3433 aa16.28■□□□□ 0.2
CHRFAM7A-206ENST00000569278 FAM196AQ6ZSG2 479 aa16.27■□□□□ 0.2
CHRFAM7A-206ENST00000569278 USP6P35125 1406 aa16.27■□□□□ 0.19
CHRFAM7A-206ENST00000569278 MKRN4PQ13434 485 aaPredicted RBP16.26■□□□□ 0.19
CHRFAM7A-206ENST00000569278 TRPM1Q7Z4N2 1603 aa16.26■□□□□ 0.19
CHRFAM7A-206ENST00000569278 AKAP12Q02952 1782 aa16.25■□□□□ 0.19
CHRFAM7A-206ENST00000569278 CASZ1Q86V15 1759 aa16.25■□□□□ 0.19
CHRFAM7A-206ENST00000569278 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
CHRFAM7A-206ENST00000569278 ABTB2Q8N961 1025 aa16.24■□□□□ 0.19
CHRFAM7A-206ENST00000569278 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
CHRFAM7A-206ENST00000569278 CENPJQ9HC77 1338 aaPredicted RBP16.23■□□□□ 0.19
CHRFAM7A-206ENST00000569278 CRB1P82279 1406 aa16.23■□□□□ 0.19
CHRFAM7A-206ENST00000569278 APBA3O96018 575 aa16.23■□□□□ 0.19
CHRFAM7A-206ENST00000569278 GCP02774 474 aa16.23■□□□□ 0.19
CHRFAM7A-206ENST00000569278 RGPD5Q99666 1765 aa16.23■□□□□ 0.19
CHRFAM7A-206ENST00000569278 NFAT5O94916 1531 aa16.22■□□□□ 0.19
CHRFAM7A-206ENST00000569278 PTF1AQ7RTS3 328 aa16.21■□□□□ 0.19
CHRFAM7A-206ENST00000569278 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
CHRFAM7A-206ENST00000569278 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
CHRFAM7A-206ENST00000569278 OVOS2A0A0G2JMS6 1433 aa16.19■□□□□ 0.18
CHRFAM7A-206ENST00000569278 OVOS2A0A0J9YW53 1432 aa16.19■□□□□ 0.18
CHRFAM7A-206ENST00000569278 CPSF1Q10570 1443 aaKnown RBP16.19■□□□□ 0.18
CHRFAM7A-206ENST00000569278 OVOS2Q6IE36 1432 aa16.19■□□□□ 0.18
CHRFAM7A-206ENST00000569278 ZEB1P37275 1124 aaPredicted RBP16.19■□□□□ 0.18
CHRFAM7A-206ENST00000569278 EVA1CP58658 441 aa16.19■□□□□ 0.18
CHRFAM7A-206ENST00000569278 SRPK2P78362 688 aaKnown RBP16.19■□□□□ 0.18
CHRFAM7A-206ENST00000569278 THRAP3Q9Y2W1 955 aaKnown RBP16.19■□□□□ 0.18
CHRFAM7A-206ENST00000569278 USP54Q70EL1 1684 aa16.18■□□□□ 0.18
CHRFAM7A-206ENST00000569278 PDE3BQ13370 1112 aa16.18■□□□□ 0.18
CHRFAM7A-206ENST00000569278 NLRP13Q86W25 1043 aa16.18■□□□□ 0.18
CHRFAM7A-206ENST00000569278 ANO8Q9HCE9 1232 aaPredicted RBP16.18■□□□□ 0.18
CHRFAM7A-206ENST00000569278 CABP1Q9NZU7 370 aa16.18■□□□□ 0.18
CHRFAM7A-206ENST00000569278 AXIN2Q9Y2T1 843 aa16.18■□□□□ 0.18
CHRFAM7A-206ENST00000569278 MON2Q7Z3U7 1717 aa16.18■□□□□ 0.18
CHRFAM7A-206ENST00000569278 BCL9O00512 1426 aa16.16■□□□□ 0.18
CHRFAM7A-206ENST00000569278 L3MBTL2Q969R5 705 aa16.14■□□□□ 0.17
CHRFAM7A-206ENST00000569278 MYOM1P52179 1685 aa16.14■□□□□ 0.17
CHRFAM7A-206ENST00000569278 ABCC6O95255 1503 aa16.14■□□□□ 0.17
CHRFAM7A-206ENST00000569278 NLRP6P59044 892 aa16.13■□□□□ 0.17
CHRFAM7A-206ENST00000569278 PDGFDQ9GZP0 370 aaPredicted RBP16.13■□□□□ 0.17
CHRFAM7A-206ENST00000569278 CD163L1Q9NR16 1453 aa16.13■□□□□ 0.17
CHRFAM7A-206ENST00000569278 WDR17Q8IZU2 1322 aa16.13■□□□□ 0.17
CHRFAM7A-206ENST00000569278 PAPPAQ13219 1627 aa16.12■□□□□ 0.17
CHRFAM7A-206ENST00000569278 ARHGEF25Q86VW2 580 aa16.12■□□□□ 0.17
CHRFAM7A-206ENST00000569278 PROM2Q8N271 834 aa16.12■□□□□ 0.17
CHRFAM7A-206ENST00000569278 MARCH10Q8NA82 808 aaPredicted RBP16.12■□□□□ 0.17
CHRFAM7A-206ENST00000569278 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
CHRFAM7A-206ENST00000569278 TTC21BQ7Z4L5 1316 aa16.11■□□□□ 0.17
CHRFAM7A-206ENST00000569278 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
CHRFAM7A-206ENST00000569278 TNS2Q63HR2 1409 aa16.1■□□□□ 0.17
CHRFAM7A-206ENST00000569278 GOLGB1Q14789 3259 aaKnown RBP16.09■□□□□ 0.17
CHRFAM7A-206ENST00000569278 LTN1O94822 1766 aa16.09■□□□□ 0.17
CHRFAM7A-206ENST00000569278 PLSCR1O15162 318 aa16.09■□□□□ 0.17
CHRFAM7A-206ENST00000569278 DDB1Q16531 1140 aa16.09■□□□□ 0.17
CHRFAM7A-206ENST00000569278 NINLQ9Y2I6 1382 aa16.09■□□□□ 0.17
CHRFAM7A-206ENST00000569278 TOM1L2Q6ZVM7 507 aa16.08■□□□□ 0.16
CHRFAM7A-206ENST00000569278 SIN3AQ96ST3 1273 aa16.08■□□□□ 0.16
CHRFAM7A-206ENST00000569278 EVC2Q86UK5 1308 aa16.08■□□□□ 0.16
CHRFAM7A-206ENST00000569278 KCNQ2O43526 872 aa16.07■□□□□ 0.16
CHRFAM7A-206ENST00000569278 NBPF14Q5TI25 921 aa16.07■□□□□ 0.16
CHRFAM7A-206ENST00000569278 BCL11BQ9C0K0 894 aaPredicted RBP16.07■□□□□ 0.16
CHRFAM7A-206ENST00000569278 ROCK2O75116 1388 aaKnown RBP16.06■□□□□ 0.16
CHRFAM7A-206ENST00000569278 SBNO2Q9Y2G9 1366 aa16.06■□□□□ 0.16
CHRFAM7A-206ENST00000569278 USP31Q70CQ4 1352 aa16.05■□□□□ 0.16
CHRFAM7A-206ENST00000569278 CARD10Q9BWT7 1032 aa16.05■□□□□ 0.16
CHRFAM7A-206ENST00000569278 SPON1Q9HCB6 807 aa16.05■□□□□ 0.16
CHRFAM7A-206ENST00000569278 TTC21AQ8NDW8 1320 aa16.04■□□□□ 0.16
CHRFAM7A-206ENST00000569278 BTAF1O14981 1849 aa16.04■□□□□ 0.16
CHRFAM7A-206ENST00000569278 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
CHRFAM7A-206ENST00000569278 SOX12O15370 315 aa16.04■□□□□ 0.16
CHRFAM7A-206ENST00000569278 PTGER2P43116 358 aa16.04■□□□□ 0.16
CHRFAM7A-206ENST00000569278 KTN1Q86UP2 1357 aaKnown RBP16.02■□□□□ 0.16
CHRFAM7A-206ENST00000569278 CCDC7Q96M83 1385 aa16.01■□□□□ 0.15
CHRFAM7A-206ENST00000569278 ERBB3P21860 1342 aa16.01■□□□□ 0.15
CHRFAM7A-206ENST00000569278 YY1P25490 414 aa16.01■□□□□ 0.15
CHRFAM7A-206ENST00000569278 KCNH5Q8NCM2 988 aa16.01■□□□□ 0.15
CHRFAM7A-206ENST00000569278 CDCA7Q9BWT1 371 aaPredicted RBP16.01■□□□□ 0.15
CHRFAM7A-206ENST00000569278 SHANK3Q9BYB0 1731 aa16.01■□□□□ 0.15
CHRFAM7A-206ENST00000569278 FAM208AQ9UK61 1670 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-206ENST00000569278 ZBTB7AO95365 584 aa16■□□□□ 0.15
CHRFAM7A-206ENST00000569278 TXNRD1Q16881 649 aa16■□□□□ 0.15
CHRFAM7A-206ENST00000569278 SGIP1Q9BQI5 828 aa16■□□□□ 0.15
CHRFAM7A-206ENST00000569278 ZNF692Q9BU19 519 aaPredicted RBP16■□□□□ 0.15
CHRFAM7A-206ENST00000569278 TUBGCP6Q96RT7 1819 aa15.99■□□□□ 0.15
CHRFAM7A-206ENST00000569278 NME9Q86XW9 330 aa15.99■□□□□ 0.15
CHRFAM7A-206ENST00000569278 COL24A1Q17RW2 1714 aa15.99■□□□□ 0.15
CHRFAM7A-206ENST00000569278 PPP1R1BQ9UD71 204 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-206ENST00000569278 A0A1W2PP64 1363 aa15.97■□□□□ 0.15
CHRFAM7A-206ENST00000569278 QSER1Q2KHR3 1735 aa15.97■□□□□ 0.15
CHRFAM7A-206ENST00000569278 CSB-PGBD3P0DP91 1061 aa15.96■□□□□ 0.15
CHRFAM7A-206ENST00000569278 SLC15A2Q16348 729 aa15.96■□□□□ 0.15
CHRFAM7A-206ENST00000569278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.96■□□□□ 0.15
CHRFAM7A-206ENST00000569278 EDC4Q6P2E9 1401 aaKnown RBP15.95■□□□□ 0.14
CHRFAM7A-206ENST00000569278 NEUROD1Q13562 356 aa15.95■□□□□ 0.14
CHRFAM7A-206ENST00000569278 ZNF827Q17R98 1081 aa15.95■□□□□ 0.14
CHRFAM7A-206ENST00000569278 RGPD2P0DJD1 1756 aa15.95■□□□□ 0.14
CHRFAM7A-206ENST00000569278 DOT1LQ8TEK3 1739 aa15.94■□□□□ 0.14
CHRFAM7A-206ENST00000569278 EXOC5O00471 708 aa15.94■□□□□ 0.14
CHRFAM7A-206ENST00000569278 ACSBG1Q96GR2 724 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms