RNA–Protein interactions for RNA: ENST00000569238.1

AP000842.3-202, humanhuman

BASIC

Gene AP000842.3, Length 1,080 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-202ENST00000569238 CGNL1Q0VF96 1302 aa22.68■■□□□ 1.22
AP000842.3-202ENST00000569238 SPATA31A5Q5VU36 1347 aa22.68■■□□□ 1.22
AP000842.3-202ENST00000569238 SPATA31A7Q8IWB4 1347 aa22.68■■□□□ 1.22
AP000842.3-202ENST00000569238 AXIN2Q9Y2T1 843 aa22.68■■□□□ 1.22
AP000842.3-202ENST00000569238 SOCS7O14512 581 aa22.67■■□□□ 1.22
AP000842.3-202ENST00000569238 EVA1CP58658 441 aa22.67■■□□□ 1.22
AP000842.3-202ENST00000569238 ZEB1P37275 1124 aaPredicted RBP22.66■■□□□ 1.22
AP000842.3-202ENST00000569238 RGPD5Q99666 1765 aa22.66■■□□□ 1.22
AP000842.3-202ENST00000569238 LARP1Q6PKG0 1096 aaKnown RBP22.65■■□□□ 1.22
AP000842.3-202ENST00000569238 SPATA31A1Q5TZJ5 1347 aa22.64■■□□□ 1.22
AP000842.3-202ENST00000569238 FBLN1P23142 703 aa22.64■■□□□ 1.21
AP000842.3-202ENST00000569238 ONECUT3O60422 494 aaPredicted RBP22.63■■□□□ 1.21
AP000842.3-202ENST00000569238 MAP3K19Q56UN5 1328 aa22.62■■□□□ 1.21
AP000842.3-202ENST00000569238 CRB1P82279 1406 aa22.61■■□□□ 1.21
AP000842.3-202ENST00000569238 FAM98CQ17RN3 349 aaKnown RBP22.61■■□□□ 1.21
AP000842.3-202ENST00000569238 ANKRD26Q9UPS8 1709 aa22.61■■□□□ 1.21
AP000842.3-202ENST00000569238 WDR17Q8IZU2 1322 aa22.6■■□□□ 1.21
AP000842.3-202ENST00000569238 SEPT12Q8IYM1 358 aa22.6■■□□□ 1.21
AP000842.3-202ENST00000569238 KNSTRNQ9Y448 316 aa22.6■■□□□ 1.21
AP000842.3-202ENST00000569238 RRS1Q15050 365 aaKnown RBP22.59■■□□□ 1.21
AP000842.3-202ENST00000569238 IP6K1Q92551 441 aa22.59■■□□□ 1.21
AP000842.3-202ENST00000569238 USP35Q9P2H5 1018 aa22.59■■□□□ 1.21
AP000842.3-202ENST00000569238 NSD2O96028 1365 aa22.59■■□□□ 1.21
AP000842.3-202ENST00000569238 BLMP54132 1417 aaPredicted RBP22.58■■□□□ 1.21
AP000842.3-202ENST00000569238 ERBB3P21860 1342 aa22.57■■□□□ 1.2
AP000842.3-202ENST00000569238 TOM1L2Q6ZVM7 507 aa22.57■■□□□ 1.2
AP000842.3-202ENST00000569238 TCP11L2Q8N4U5 519 aa22.57■■□□□ 1.2
AP000842.3-202ENST00000569238 THSD7AQ9UPZ6 1657 aa22.57■■□□□ 1.2
AP000842.3-202ENST00000569238 BRWD3Q6RI45 1802 aa22.57■■□□□ 1.2
AP000842.3-202ENST00000569238 RTL1A6NKG5 1358 aa22.56■■□□□ 1.2
AP000842.3-202ENST00000569238 PER1O15534 1290 aaPredicted RBP22.56■■□□□ 1.2
AP000842.3-202ENST00000569238 CSB-PGBD3P0DP91 1061 aa22.56■■□□□ 1.2
AP000842.3-202ENST00000569238 HOXC9P31274 260 aa22.56■■□□□ 1.2
AP000842.3-202ENST00000569238 AMPHP49418 695 aa22.56■■□□□ 1.2
AP000842.3-202ENST00000569238 BARGINQ6ZT62 677 aa22.56■■□□□ 1.2
AP000842.3-202ENST00000569238 THRAP3Q9Y2W1 955 aaKnown RBP22.56■■□□□ 1.2
AP000842.3-202ENST00000569238 AMER1Q5JTC6 1135 aaPredicted RBP22.55■■□□□ 1.2
AP000842.3-202ENST00000569238 A0A0G2JS52 829 aa22.54■■□□□ 1.2
AP000842.3-202ENST00000569238 MYT1Q01538 1121 aa22.54■■□□□ 1.2
AP000842.3-202ENST00000569238 ANKRD24Q8TF21 1146 aa22.54■■□□□ 1.2
AP000842.3-202ENST00000569238 CARD10Q9BWT7 1032 aa22.54■■□□□ 1.2
AP000842.3-202ENST00000569238 PEAK1Q9H792 1746 aa22.53■■□□□ 1.2
AP000842.3-202ENST00000569238 KIF24Q5T7B8 1368 aa22.52■■□□□ 1.2
AP000842.3-202ENST00000569238 EMILIN1Q9Y6C2 1016 aa22.52■■□□□ 1.2
AP000842.3-202ENST00000569238 MAP2P11137 1827 aaKnown RBP22.52■■□□□ 1.2
AP000842.3-202ENST00000569238 FLT4P35916 1363 aa22.5■■□□□ 1.19
AP000842.3-202ENST00000569238 MORC1Q86VD1 984 aa22.5■■□□□ 1.19
AP000842.3-202ENST00000569238 TNNT2P45379 298 aaPredicted RBP22.49■■□□□ 1.19
AP000842.3-202ENST00000569238 KRT27Q7Z3Y8 459 aa22.49■■□□□ 1.19
AP000842.3-202ENST00000569238 LTV1Q96GA3 475 aaPredicted RBP22.49■■□□□ 1.19
AP000842.3-202ENST00000569238 NLRP2Q9NX02 1062 aa22.49■■□□□ 1.19
AP000842.3-202ENST00000569238 INSRP06213 1382 aa22.49■■□□□ 1.19
AP000842.3-202ENST00000569238 FAM208AQ9UK61 1670 aaKnown RBP22.49■■□□□ 1.19
AP000842.3-202ENST00000569238 EP400Q96L91 3159 aa22.48■■□□□ 1.19
AP000842.3-202ENST00000569238 WNK3Q9BYP7 1800 aa22.48■■□□□ 1.19
AP000842.3-202ENST00000569238 POLKQ9UBT6 870 aa22.48■■□□□ 1.19
AP000842.3-202ENST00000569238 PARP4Q9UKK3 1724 aaKnown RBP22.48■■□□□ 1.19
AP000842.3-202ENST00000569238 HSP90AB2PQ58FF8 381 aa22.47■■□□□ 1.19
AP000842.3-202ENST00000569238 NPC1L1Q9UHC9 1359 aa22.47■■□□□ 1.19
AP000842.3-202ENST00000569238 UPF1Q92900 1129 aaKnown RBP eCLIP22.46■■□□□ 1.19
AP000842.3-202ENST00000569238 DISP2A7MBM2 1401 aa22.46■■□□□ 1.19
AP000842.3-202ENST00000569238 PPM1GO15355 546 aaPredicted RBP22.45■■□□□ 1.18
AP000842.3-202ENST00000569238 CC2D1BQ5T0F9 858 aaKnown RBP22.44■■□□□ 1.18
AP000842.3-202ENST00000569238 SMG6Q86US8 1419 aaKnown RBP22.44■■□□□ 1.18
AP000842.3-202ENST00000569238 CDCA7Q9BWT1 371 aaPredicted RBP22.44■■□□□ 1.18
AP000842.3-202ENST00000569238 RGPD2P0DJD1 1756 aa22.43■■□□□ 1.18
AP000842.3-202ENST00000569238 LRRC37A3O60309 1634 aa22.43■■□□□ 1.18
AP000842.3-202ENST00000569238 PDE3BQ13370 1112 aa22.41■■□□□ 1.18
AP000842.3-202ENST00000569238 DDB1Q16531 1140 aa22.4■■□□□ 1.18
AP000842.3-202ENST00000569238 IL2RBP14784 551 aa22.39■■□□□ 1.17
AP000842.3-202ENST00000569238 FAM182BQ5T319 152 aa22.39■■□□□ 1.17
AP000842.3-202ENST00000569238 NBPF6Q5VWK0 638 aa22.39■■□□□ 1.17
AP000842.3-202ENST00000569238 NBPF4Q96M43 638 aa22.39■■□□□ 1.17
AP000842.3-202ENST00000569238 CNGB1Q14028 1251 aaPredicted RBP22.37■■□□□ 1.17
AP000842.3-202ENST00000569238 TNS2Q63HR2 1409 aa22.36■■□□□ 1.17
AP000842.3-202ENST00000569238 EXOC5O00471 708 aa22.35■■□□□ 1.17
AP000842.3-202ENST00000569238 USHBP1Q8N6Y0 703 aa22.35■■□□□ 1.17
AP000842.3-202ENST00000569238 EIF4A2Q14240 407 aaKnown RBP22.34■■□□□ 1.17
AP000842.3-202ENST00000569238 FAM196AQ6ZSG2 479 aa22.34■■□□□ 1.17
AP000842.3-202ENST00000569238 NCAPD2Q15021 1401 aa22.33■■□□□ 1.17
AP000842.3-202ENST00000569238 CCDC125Q86Z20 511 aa22.33■■□□□ 1.17
AP000842.3-202ENST00000569238 OVOS2A0A0G2JMS6 1433 aa22.32■■□□□ 1.16
AP000842.3-202ENST00000569238 MEGF6O75095 1541 aa22.32■■□□□ 1.16
AP000842.3-202ENST00000569238 DDX10Q13206 875 aaKnown RBP22.32■■□□□ 1.16
AP000842.3-202ENST00000569238 MARCH10Q8NA82 808 aaPredicted RBP22.32■■□□□ 1.16
AP000842.3-202ENST00000569238 EYA1Q99502 592 aa22.32■■□□□ 1.16
AP000842.3-202ENST00000569238 MTHFSP49914 203 aa22.31■■□□□ 1.16
AP000842.3-202ENST00000569238 RAPGEF4Q8WZA2 1011 aa22.28■■□□□ 1.16
AP000842.3-202ENST00000569238 RGPD1P0DJD0 1748 aa22.28■■□□□ 1.16
AP000842.3-202ENST00000569238 BCL9O00512 1426 aa22.27■■□□□ 1.16
AP000842.3-202ENST00000569238 TATP17735 454 aaPredicted RBP22.27■■□□□ 1.16
AP000842.3-202ENST00000569238 IGSF1Q8N6C5 1336 aa22.27■■□□□ 1.16
AP000842.3-202ENST00000569238 TRIM37O94972 964 aa22.25■■□□□ 1.15
AP000842.3-202ENST00000569238 IL13P35225 146 aa22.25■■□□□ 1.15
AP000842.3-202ENST00000569238 SF3B2Q13435 895 aaKnown RBP22.25■■□□□ 1.15
AP000842.3-202ENST00000569238 ZCRB1Q8TBF4 217 aaKnown RBP22.25■■□□□ 1.15
AP000842.3-202ENST00000569238 SHANK3Q9BYB0 1731 aa22.25■■□□□ 1.15
AP000842.3-202ENST00000569238 TNS1Q9HBL0 1735 aaKnown RBP22.25■■□□□ 1.15
AP000842.3-202ENST00000569238 SBF2Q86WG5 1849 aa22.24■■□□□ 1.15
AP000842.3-202ENST00000569238 ZNF316A6NFI3 1004 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms