RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 KIFC2Q96AC6 838 aa15.03■□□□□ -0
DNAAF4-CCPG1-202ENST00000568310 CCDC116Q8IYX3 515 aa15.02■□□□□ -0
DNAAF4-CCPG1-202ENST00000568310 MTMR14Q8NCE2 650 aa15.02■□□□□ -0
DNAAF4-CCPG1-202ENST00000568310 KCTD15Q96SI1 283 aaPredicted RBP15.02■□□□□ -0
DNAAF4-CCPG1-202ENST00000568310 ZFAND3Q9H8U3 227 aa15.02■□□□□ -0
DNAAF4-CCPG1-202ENST00000568310 SNRKQ9NRH2 765 aa15.02■□□□□ -0
DNAAF4-CCPG1-202ENST00000568310 SNRPBP14678 240 aaKnown RBP15.01□□□□□ -0.01
DNAAF4-CCPG1-202ENST00000568310 EMILIN1Q9Y6C2 1016 aa15□□□□□ -0.01
DNAAF4-CCPG1-202ENST00000568310 APBB1O00213 710 aa14.99□□□□□ -0.01
DNAAF4-CCPG1-202ENST00000568310 MRPL14Q6P1L8 145 aaKnown RBP14.98□□□□□ -0.01
DNAAF4-CCPG1-202ENST00000568310 DZIP3Q86Y13 1208 aaKnown RBP14.98□□□□□ -0.01
DNAAF4-CCPG1-202ENST00000568310 ZBBXA8MT70 800 aa14.97□□□□□ -0.01
DNAAF4-CCPG1-202ENST00000568310 NDUFB9Q9Y6M9 179 aa14.97□□□□□ -0.01
DNAAF4-CCPG1-202ENST00000568310 SCARF1Q14162 830 aa14.96□□□□□ -0.01
DNAAF4-CCPG1-202ENST00000568310 NBPF20Q3BBV1 942 aa14.96□□□□□ -0.01
DNAAF4-CCPG1-202ENST00000568310 ZFP42Q96MM3 310 aa14.96□□□□□ -0.01
DNAAF4-CCPG1-202ENST00000568310 ABCC9O60706 1549 aa14.96□□□□□ -0.02
DNAAF4-CCPG1-202ENST00000568310 PPP1R26Q5T8A7 1209 aaPredicted RBP14.95□□□□□ -0.02
DNAAF4-CCPG1-202ENST00000568310 FBXO45P0C2W1 286 aa14.94□□□□□ -0.02
DNAAF4-CCPG1-202ENST00000568310 DHX9Q08211 1270 aaKnown RBP14.94□□□□□ -0.02
DNAAF4-CCPG1-202ENST00000568310 INTS6LQ5JSJ4 861 aaKnown RBP14.94□□□□□ -0.02
DNAAF4-CCPG1-202ENST00000568310 PURBQ96QR8 312 aaKnown RBP14.93□□□□□ -0.02
DNAAF4-CCPG1-202ENST00000568310 PGPEP1Q9NXJ5 209 aa14.93□□□□□ -0.02
DNAAF4-CCPG1-202ENST00000568310 MEIOBQ8N635 442 aa14.91□□□□□ -0.02
DNAAF4-CCPG1-202ENST00000568310 GPR37L1O60883 481 aa14.9□□□□□ -0.02
DNAAF4-CCPG1-202ENST00000568310 UPP2O95045 317 aa14.89□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 NR1H3Q13133 447 aa14.89□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 PCDHB9Q9Y5E1 797 aa14.89□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 LINC00528Q8N1L1 170 aa14.88□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 ESPNB1AK53 854 aa14.87□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 RAB15P59190 212 aa14.87□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 C6orf118Q5T5N4 469 aa14.87□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 PRM3Q9NNZ6 103 aa14.86□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 BMP2P12643 396 aa14.85□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 CBLBQ13191 982 aa14.85□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 TSEN34Q9BSV6 310 aaKnown RBP14.85□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 ZNF330Q9Y3S2 320 aaPredicted RBP14.85□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 Q6ZVU0 165 aa14.84□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 SEPT12Q8IYM1 358 aa14.84□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 TBC1D2BQ9UPU7 963 aa14.84□□□□□ -0.03
DNAAF4-CCPG1-202ENST00000568310 ERVH48-1M5A8F1 160 aa14.83□□□□□ -0.04
DNAAF4-CCPG1-202ENST00000568310 TMPRSS4Q9NRS4 437 aa14.83□□□□□ -0.04
DNAAF4-CCPG1-202ENST00000568310 MCCD1P59942 119 aaPredicted RBP14.82□□□□□ -0.04
DNAAF4-CCPG1-202ENST00000568310 TREML4Q6UXN2 200 aa14.81□□□□□ -0.04
DNAAF4-CCPG1-202ENST00000568310 ZNF592Q92610 1267 aa14.81□□□□□ -0.04
DNAAF4-CCPG1-202ENST00000568310 GIGYF1O75420 1035 aaPredicted RBP14.8□□□□□ -0.04
DNAAF4-CCPG1-202ENST00000568310 ZNF784Q8NCA9 323 aaPredicted RBP14.8□□□□□ -0.04
DNAAF4-CCPG1-202ENST00000568310 TERTO14746 1132 aaKnown RBP14.77□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 WFS1O76024 890 aa14.77□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 NFX1Q12986 1120 aaKnown RBP14.77□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 MCM6Q14566 821 aa14.77□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 SOBPA7XYQ1 873 aa14.76□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 MAN1A2O60476 641 aa14.76□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 NXF1Q9UBU9 619 aaKnown RBP14.76□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 SOS2Q07890 1332 aaPredicted RBP14.75□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 LILRA1O75019 489 aa14.75□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 LCE2AQ5TA79 106 aaPredicted RBP14.75□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 RNF20Q5VTR2 975 aa14.75□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 CCDC125Q86Z20 511 aa14.75□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 TRIM52Q96A61 297 aa14.75□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 IRF5Q13568 498 aa14.74□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 AGBL1Q96MI9 1066 aa14.74□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 GDPD2Q9HCC8 539 aa14.74□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 SPINT1O43278 529 aa14.73□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 ADD1P35611 737 aaKnown RBP14.73□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 RELBQ01201 579 aa14.72□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 CYLDQ9NQC7 956 aa14.72□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 TTLL8A6PVC2 850 aa14.71□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 ADH1AP07327 375 aa14.71□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 ABL2P42684 1182 aa14.71□□□□□ -0.05
DNAAF4-CCPG1-202ENST00000568310 TMEM132AQ24JP5 1023 aa14.7□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 NPAS3Q8IXF0 933 aa14.7□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 EIF4G2P78344 907 aaKnown RBP eCLIP14.69□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 DNMT3LQ9UJW3 386 aa14.69□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 SLC16A10Q8TF71 515 aa14.68□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 ZNF395Q9H8N7 513 aaPredicted RBP14.67□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 CEP126Q9P2H0 1117 aa14.67□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 VAC14Q08AM6 782 aa14.66□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 INSM2Q96T92 566 aaPredicted RBP14.66□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 PTGIRP43119 386 aa14.65□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 VEGFBP49765 207 aa14.65□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 WASHC4Q2M389 1173 aa14.65□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 KDF1Q8NAX2 398 aaPredicted RBP14.65□□□□□ -0.06
DNAAF4-CCPG1-202ENST00000568310 FIGNL2A6NMB9 653 aa14.64□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 ERVK-9P63128 1117 aa14.64□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.64□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 CC2D2BQ6DHV5 1058 aa14.64□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 COG6Q9Y2V7 657 aa14.64□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 PCDHB11Q9Y5F2 797 aa14.64□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 CTSOP43234 321 aaPredicted RBP14.63□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 POLMQ9NP87 494 aaPredicted RBP14.63□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 H3BM21 787 aa14.62□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 FLIIQ13045 1269 aa14.61□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 LCE2CQ5TA81 110 aa14.61□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 ATP5J2-PTCD1G3V325 749 aa14.6□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 SCTRP47872 440 aa14.59□□□□□ -0.07
DNAAF4-CCPG1-202ENST00000568310 IRF7Q92985 503 aa14.58□□□□□ -0.08
DNAAF4-CCPG1-202ENST00000568310 CCDC85AQ96PX6 553 aaPredicted RBP14.58□□□□□ -0.08
DNAAF4-CCPG1-202ENST00000568310 ESF1Q9H501 851 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms