RNA–Protein interactions for RNA: ENST00000568062.5

ZFYVE19-213, Transcript of zinc finger FYVE-type containing 19, human

TSL 3

Gene ZFYVE19, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZFYVE19-213	ENST00000568062	TIMELESS	Q9UNS1	1208 aa		33.39	■■■□□ 2.94
ZFYVE19-213	ENST00000568062	AXIN2	Q9Y2T1	843 aa		33.39	■■■□□ 2.94
ZFYVE19-213	ENST00000568062	COL18A1	P39060	1754 aa		33.39	■■■□□ 2.94
ZFYVE19-213	ENST00000568062	TOM1L2	Q6ZVM7	507 aa		33.38	■■■□□ 2.93
ZFYVE19-213	ENST00000568062	NFAT5	O94916	1531 aa		33.38	■■■□□ 2.93
ZFYVE19-213	ENST00000568062	CLSPN	Q9HAW4	1339 aa		33.37	■■■□□ 2.93
ZFYVE19-213	ENST00000568062	C11orf95	C9JLR9	678 aa	Predicted RBP	33.36	■■■□□ 2.93
ZFYVE19-213	ENST00000568062	SOX12	O15370	315 aa		33.36	■■■□□ 2.93
ZFYVE19-213	ENST00000568062	ABCC6	O95255	1503 aa		33.36	■■■□□ 2.93
ZFYVE19-213	ENST00000568062		A0A1W2PP64	1363 aa		33.35	■■■□□ 2.93
ZFYVE19-213	ENST00000568062	USP54	Q70EL1	1684 aa		33.34	■■■□□ 2.93
ZFYVE19-213	ENST00000568062	EN1	Q05925	392 aa	Predicted RBP	33.34	■■■□□ 2.93
ZFYVE19-213	ENST00000568062	PARP4	Q9UKK3	1724 aa	Known RBP	33.33	■■■□□ 2.93
ZFYVE19-213	ENST00000568062	TRIM37	O94972	964 aa		33.33	■■■□□ 2.93
ZFYVE19-213	ENST00000568062	NME9	Q86XW9	330 aa		33.33	■■■□□ 2.93
ZFYVE19-213	ENST00000568062	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.32	■■■□□ 2.92
ZFYVE19-213	ENST00000568062	CARD10	Q9BWT7	1032 aa		33.3	■■■□□ 2.92
ZFYVE19-213	ENST00000568062	USP47	Q96K76	1375 aa		33.3	■■■□□ 2.92
ZFYVE19-213	ENST00000568062	TNS1	Q9HBL0	1735 aa	Known RBP	33.3	■■■□□ 2.92
ZFYVE19-213	ENST00000568062	CSB-PGBD3	P0DP91	1061 aa		33.29	■■■□□ 2.92
ZFYVE19-213	ENST00000568062	TMF1	P82094	1093 aa		33.28	■■■□□ 2.92
ZFYVE19-213	ENST00000568062	PARD3	Q8TEW0	1356 aa		33.28	■■■□□ 2.92
ZFYVE19-213	ENST00000568062	DDB1	Q16531	1140 aa		33.27	■■■□□ 2.92
ZFYVE19-213	ENST00000568062	APBA3	O96018	575 aa		33.25	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	OVOS2	A0A0G2JMS6	1433 aa		33.25	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	OVOS2	A0A0J9YW53	1432 aa		33.25	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	OVOS2	Q6IE36	1432 aa		33.25	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	CAMKK2	Q96RR4	588 aa		33.24	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	CCDC7	Q96M83	1385 aa		33.23	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	EZH2	Q15910	746 aa	Known RBP	33.23	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	PCGF6	Q9BYE7	350 aa		33.22	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	ANKRD36B	Q8N2N9	1353 aa		33.21	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	LRRC37A3	O60309	1634 aa		33.21	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	CDCA8	Q53HL2	280 aa		33.2	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	ERBB3	P21860	1342 aa		33.2	■■■□□ 2.91
ZFYVE19-213	ENST00000568062	RGPD5	Q99666	1765 aa		33.16	■■■□□ 2.9
ZFYVE19-213	ENST00000568062	COG3	Q96JB2	828 aa		33.16	■■■□□ 2.9
ZFYVE19-213	ENST00000568062	BCL9	O00512	1426 aa		33.16	■■■□□ 2.9
ZFYVE19-213	ENST00000568062	WNK3	Q9BYP7	1800 aa		33.15	■■■□□ 2.9
ZFYVE19-213	ENST00000568062	PEAK1	Q9H792	1746 aa		33.15	■■■□□ 2.9
ZFYVE19-213	ENST00000568062	PSD	A5PKW4	1024 aa	Predicted RBP	33.14	■■■□□ 2.9
ZFYVE19-213	ENST00000568062	EXOC5	O00471	708 aa		33.13	■■■□□ 2.89
ZFYVE19-213	ENST00000568062	MARCH10	Q8NA82	808 aa	Predicted RBP	33.11	■■■□□ 2.89
ZFYVE19-213	ENST00000568062	ANKRD24	Q8TF21	1146 aa		33.11	■■■□□ 2.89
ZFYVE19-213	ENST00000568062	IP6K1	Q92551	441 aa		33.11	■■■□□ 2.89
ZFYVE19-213	ENST00000568062	NLRP2	Q9NX02	1062 aa		33.11	■■■□□ 2.89
ZFYVE19-213	ENST00000568062	LTN1	O94822	1766 aa		33.11	■■■□□ 2.89
ZFYVE19-213	ENST00000568062	R3HDM1	Q15032	1099 aa	Known RBP	33.09	■■■□□ 2.89
ZFYVE19-213	ENST00000568062	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.09	■■■□□ 2.89
ZFYVE19-213	ENST00000568062	TNS2	Q63HR2	1409 aa		33.08	■■■□□ 2.89
ZFYVE19-213	ENST00000568062	PLSCR1	O15162	318 aa		33.07	■■■□□ 2.88
ZFYVE19-213	ENST00000568062	LRP5	O75197	1615 aa		33.06	■■■□□ 2.88
ZFYVE19-213	ENST00000568062	RREB1	Q92766	1687 aa		33.05	■■■□□ 2.88
ZFYVE19-213	ENST00000568062	IL2RB	P14784	551 aa		33.05	■■■□□ 2.88
ZFYVE19-213	ENST00000568062	NBPF14	Q5TI25	921 aa		33.04	■■■□□ 2.88
ZFYVE19-213	ENST00000568062	FYB1	O15117	783 aa		33.03	■■■□□ 2.88
ZFYVE19-213	ENST00000568062	MAP3K19	Q56UN5	1328 aa		33.02	■■■□□ 2.88
ZFYVE19-213	ENST00000568062	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.99	■■■□□ 2.87
ZFYVE19-213	ENST00000568062	RGPD4	Q7Z3J3	1758 aa		32.99	■■■□□ 2.87
ZFYVE19-213	ENST00000568062	HOXC9	P31274	260 aa		32.99	■■■□□ 2.87
ZFYVE19-213	ENST00000568062	AMPH	P49418	695 aa		32.99	■■■□□ 2.87
ZFYVE19-213	ENST00000568062	SBF2	Q86WG5	1849 aa		32.99	■■■□□ 2.87
ZFYVE19-213	ENST00000568062	RTL1	A6NKG5	1358 aa		32.98	■■■□□ 2.87
ZFYVE19-213	ENST00000568062	NUP188	Q5SRE5	1749 aa		32.98	■■■□□ 2.87
ZFYVE19-213	ENST00000568062	CCER1	Q8TC90	406 aa	Predicted RBP	32.98	■■■□□ 2.87
ZFYVE19-213	ENST00000568062	GGNBP2	Q9H3C7	697 aa		32.98	■■■□□ 2.87
ZFYVE19-213	ENST00000568062	FAM208A	Q9UK61	1670 aa	Known RBP	32.96	■■■□□ 2.87
ZFYVE19-213	ENST00000568062	PTF1A	Q7RTS3	328 aa		32.94	■■■□□ 2.86
ZFYVE19-213	ENST00000568062	LTV1	Q96GA3	475 aa	Predicted RBP	32.94	■■■□□ 2.86
ZFYVE19-213	ENST00000568062	FBLN1	P23142	703 aa		32.93	■■■□□ 2.86
ZFYVE19-213	ENST00000568062	CARD14	Q9BXL6	1004 aa		32.9	■■■□□ 2.86
ZFYVE19-213	ENST00000568062	MYOM1	P52179	1685 aa		32.89	■■■□□ 2.86
ZFYVE19-213	ENST00000568062	KIF24	Q5T7B8	1368 aa		32.89	■■■□□ 2.86
ZFYVE19-213	ENST00000568062	RRS1	Q15050	365 aa	Known RBP	32.89	■■■□□ 2.86
ZFYVE19-213	ENST00000568062	NSD3	Q9BZ95	1437 aa		32.88	■■■□□ 2.85
ZFYVE19-213	ENST00000568062	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.88	■■■□□ 2.85
ZFYVE19-213	ENST00000568062	SMG6	Q86US8	1419 aa	Known RBP	32.85	■■■□□ 2.85
ZFYVE19-213	ENST00000568062	KCNQ2	O43526	872 aa		32.85	■■■□□ 2.85
ZFYVE19-213	ENST00000568062	PROM2	Q8N271	834 aa		32.85	■■■□□ 2.85
ZFYVE19-213	ENST00000568062	KIF20B	Q96Q89	1820 aa		32.84	■■■□□ 2.85
ZFYVE19-213	ENST00000568062	NHS	Q6T4R5	1651 aa		32.84	■■■□□ 2.85
ZFYVE19-213	ENST00000568062	TXNRD1	Q16881	649 aa		32.83	■■■□□ 2.85
ZFYVE19-213	ENST00000568062	FLT4	P35916	1363 aa		32.83	■■■□□ 2.85
ZFYVE19-213	ENST00000568062	ACSBG1	Q96GR2	724 aa		32.82	■■■□□ 2.84
ZFYVE19-213	ENST00000568062	INSR	P06213	1382 aa		32.82	■■■□□ 2.84
ZFYVE19-213	ENST00000568062	CGNL1	Q0VF96	1302 aa		32.81	■■■□□ 2.84
ZFYVE19-213	ENST00000568062	HSPA5	P11021	654 aa	Known RBP	32.79	■■■□□ 2.84
ZFYVE19-213	ENST00000568062	NBPF6	Q5VWK0	638 aa		32.79	■■■□□ 2.84
ZFYVE19-213	ENST00000568062	DDX54	Q8TDD1	881 aa	Known RBP	32.79	■■■□□ 2.84
ZFYVE19-213	ENST00000568062	NBPF4	Q96M43	638 aa		32.79	■■■□□ 2.84
ZFYVE19-213	ENST00000568062	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.79	■■■□□ 2.84
ZFYVE19-213	ENST00000568062	HSP90AB2P	Q58FF8	381 aa		32.77	■■■□□ 2.84
ZFYVE19-213	ENST00000568062	ZCRB1	Q8TBF4	217 aa	Known RBP	32.77	■■■□□ 2.84
ZFYVE19-213	ENST00000568062	POLR3GL	Q9BT43	218 aa		32.75	■■■□□ 2.83
ZFYVE19-213	ENST00000568062	MEGF6	O75095	1541 aa		32.74	■■■□□ 2.83
ZFYVE19-213	ENST00000568062	SPON1	Q9HCB6	807 aa		32.74	■■■□□ 2.83
ZFYVE19-213	ENST00000568062	RAPGEF4	Q8WZA2	1011 aa		32.73	■■■□□ 2.83
ZFYVE19-213	ENST00000568062	STK32B	Q9NY57	414 aa		32.73	■■■□□ 2.83
ZFYVE19-213	ENST00000568062	EMILIN1	Q9Y6C2	1016 aa		32.71	■■■□□ 2.83
ZFYVE19-213	ENST00000568062	SLC15A2	Q16348	729 aa		32.7	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms