RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 LTN1O94822 1766 aa17.1■□□□□ 0.33
FANCA-229ENST00000567988 KIF20BQ96Q89 1820 aa17.1■□□□□ 0.33
FANCA-229ENST00000567988 BARGINQ6ZT62 677 aa17.09■□□□□ 0.33
FANCA-229ENST00000567988 KIF7Q2M1P5 1343 aa17.09■□□□□ 0.33
FANCA-229ENST00000567988 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.32
FANCA-229ENST00000567988 FAM98CQ17RN3 349 aaKnown RBP17.08■□□□□ 0.32
FANCA-229ENST00000567988 RGPD5Q99666 1765 aa17.07■□□□□ 0.32
FANCA-229ENST00000567988 DISP2A7MBM2 1401 aa17.07■□□□□ 0.32
FANCA-229ENST00000567988 STRN4Q9NRL3 753 aa17.07■□□□□ 0.32
FANCA-229ENST00000567988 BLMP54132 1417 aaPredicted RBP17.06■□□□□ 0.32
FANCA-229ENST00000567988 ERBB3P21860 1342 aa17.06■□□□□ 0.32
FANCA-229ENST00000567988 COG3Q96JB2 828 aa17.06■□□□□ 0.32
FANCA-229ENST00000567988 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
FANCA-229ENST00000567988 PARP4Q9UKK3 1724 aaKnown RBP17.06■□□□□ 0.32
FANCA-229ENST00000567988 MAP3K19Q56UN5 1328 aa17.05■□□□□ 0.32
FANCA-229ENST00000567988 SOX12O15370 315 aa17.05■□□□□ 0.32
FANCA-229ENST00000567988 THRAP3Q9Y2W1 955 aaKnown RBP17.05■□□□□ 0.32
FANCA-229ENST00000567988 CCDC9Q9Y3X0 531 aaKnown RBP17.05■□□□□ 0.32
FANCA-229ENST00000567988 WNK3Q9BYP7 1800 aa17.05■□□□□ 0.32
FANCA-229ENST00000567988 ANKRD26Q9UPS8 1709 aa17.04■□□□□ 0.32
FANCA-229ENST00000567988 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
FANCA-229ENST00000567988 FBLN1P23142 703 aa17.04■□□□□ 0.32
FANCA-229ENST00000567988 TCP11L2Q8N4U5 519 aa17.04■□□□□ 0.32
FANCA-229ENST00000567988 IP6K1Q92551 441 aa17.04■□□□□ 0.32
FANCA-229ENST00000567988 PEAK1Q9H792 1746 aa17.04■□□□□ 0.32
FANCA-229ENST00000567988 PANK3Q9H999 370 aa17.03■□□□□ 0.32
FANCA-229ENST00000567988 CCDC7Q96M83 1385 aa17.02■□□□□ 0.32
FANCA-229ENST00000567988 WASHC2AQ641Q2 1341 aa17.02■□□□□ 0.32
FANCA-229ENST00000567988 EVA1CP58658 441 aa17.02■□□□□ 0.32
FANCA-229ENST00000567988 CARD10Q9BWT7 1032 aa17.02■□□□□ 0.32
FANCA-229ENST00000567988 LRRC37A3O60309 1634 aa17.02■□□□□ 0.31
FANCA-229ENST00000567988 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.31
FANCA-229ENST00000567988 CGNL1Q0VF96 1302 aa17.01■□□□□ 0.31
FANCA-229ENST00000567988 KRT27Q7Z3Y8 459 aa17.01■□□□□ 0.31
FANCA-229ENST00000567988 ZBTB7CA1YPR0 619 aa17■□□□□ 0.31
FANCA-229ENST00000567988 HOXC9P31274 260 aa17■□□□□ 0.31
FANCA-229ENST00000567988 FAM208AQ9UK61 1670 aaKnown RBP17■□□□□ 0.31
FANCA-229ENST00000567988 NSD2O96028 1365 aa17■□□□□ 0.31
FANCA-229ENST00000567988 PER1O15534 1290 aaPredicted RBP16.99■□□□□ 0.31
FANCA-229ENST00000567988 SMG6Q86US8 1419 aaKnown RBP16.98■□□□□ 0.31
FANCA-229ENST00000567988 RRS1Q15050 365 aaKnown RBP16.98■□□□□ 0.31
FANCA-229ENST00000567988 AMER1Q5JTC6 1135 aaPredicted RBP16.98■□□□□ 0.31
FANCA-229ENST00000567988 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
FANCA-229ENST00000567988 USP35Q9P2H5 1018 aa16.98■□□□□ 0.31
FANCA-229ENST00000567988 TOM1L2Q6ZVM7 507 aa16.97■□□□□ 0.31
FANCA-229ENST00000567988 POLR3GLQ9BT43 218 aa16.97■□□□□ 0.31
FANCA-229ENST00000567988 NCAPD2Q15021 1401 aa16.96■□□□□ 0.31
FANCA-229ENST00000567988 INSRP06213 1382 aa16.96■□□□□ 0.31
FANCA-229ENST00000567988 FLT4P35916 1363 aa16.96■□□□□ 0.31
FANCA-229ENST00000567988 BCL9O00512 1426 aa16.96■□□□□ 0.3
FANCA-229ENST00000567988 CCDC125Q86Z20 511 aa16.94■□□□□ 0.3
FANCA-229ENST00000567988 CDCA7Q9BWT1 371 aaPredicted RBP16.94■□□□□ 0.3
FANCA-229ENST00000567988 EMILIN1Q9Y6C2 1016 aa16.94■□□□□ 0.3
FANCA-229ENST00000567988 TNS2Q63HR2 1409 aa16.94■□□□□ 0.3
FANCA-229ENST00000567988 TNS1Q9HBL0 1735 aaKnown RBP16.93■□□□□ 0.3
FANCA-229ENST00000567988 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
FANCA-229ENST00000567988 POLKQ9UBT6 870 aa16.93■□□□□ 0.3
FANCA-229ENST00000567988 AMPHP49418 695 aa16.92■□□□□ 0.3
FANCA-229ENST00000567988 HSP90AB2PQ58FF8 381 aa16.92■□□□□ 0.3
FANCA-229ENST00000567988 FAM182BQ5T319 152 aa16.92■□□□□ 0.3
FANCA-229ENST00000567988 CSB-PGBD3P0DP91 1061 aa16.91■□□□□ 0.3
FANCA-229ENST00000567988 RGPD2P0DJD1 1756 aa16.91■□□□□ 0.3
FANCA-229ENST00000567988 A0A0G2JS52 829 aa16.9■□□□□ 0.3
FANCA-229ENST00000567988 MYT1Q01538 1121 aa16.9■□□□□ 0.3
FANCA-229ENST00000567988 NLRP2Q9NX02 1062 aa16.9■□□□□ 0.3
FANCA-229ENST00000567988 RGPD1P0DJD0 1748 aa16.9■□□□□ 0.3
FANCA-229ENST00000567988 OVOS2A0A0G2JMS6 1433 aa16.89■□□□□ 0.29
FANCA-229ENST00000567988 NBPF6Q5VWK0 638 aa16.89■□□□□ 0.29
FANCA-229ENST00000567988 FAM196AQ6ZSG2 479 aa16.89■□□□□ 0.29
FANCA-229ENST00000567988 MARCH10Q8NA82 808 aaPredicted RBP16.89■□□□□ 0.29
FANCA-229ENST00000567988 NBPF4Q96M43 638 aa16.89■□□□□ 0.29
FANCA-229ENST00000567988 KNSTRNQ9Y448 316 aa16.89■□□□□ 0.29
FANCA-229ENST00000567988 SRCAPQ6ZRS2 3230 aa16.89■□□□□ 0.29
FANCA-229ENST00000567988 MEGF6O75095 1541 aa16.89■□□□□ 0.29
FANCA-229ENST00000567988 MAP2P11137 1827 aaKnown RBP16.89■□□□□ 0.29
FANCA-229ENST00000567988 DDB1Q16531 1140 aa16.88■□□□□ 0.29
FANCA-229ENST00000567988 SHANK3Q9BYB0 1731 aa16.87■□□□□ 0.29
FANCA-229ENST00000567988 IL2RBP14784 551 aa16.87■□□□□ 0.29
FANCA-229ENST00000567988 PDE3BQ13370 1112 aa16.87■□□□□ 0.29
FANCA-229ENST00000567988 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
FANCA-229ENST00000567988 SBF2Q86WG5 1849 aa16.85■□□□□ 0.29
FANCA-229ENST00000567988 DEFB132Q7Z7B7 95 aa16.84■□□□□ 0.29
FANCA-229ENST00000567988 MORC1Q86VD1 984 aa16.83■□□□□ 0.28
FANCA-229ENST00000567988 PLEKHG2Q9H7P9 1386 aa16.82■□□□□ 0.28
FANCA-229ENST00000567988 EXOC5O00471 708 aa16.82■□□□□ 0.28
FANCA-229ENST00000567988 EIF4A2Q14240 407 aaKnown RBP16.82■□□□□ 0.28
FANCA-229ENST00000567988 TRIM37O94972 964 aa16.81■□□□□ 0.28
FANCA-229ENST00000567988 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
FANCA-229ENST00000567988 USHBP1Q8N6Y0 703 aa16.81■□□□□ 0.28
FANCA-229ENST00000567988 EYA1Q99502 592 aa16.81■□□□□ 0.28
FANCA-229ENST00000567988 RGPD3A6NKT7 1758 aaPredicted RBP16.81■□□□□ 0.28
FANCA-229ENST00000567988 RGPD4Q7Z3J3 1758 aa16.81■□□□□ 0.28
FANCA-229ENST00000567988 PKD1L3Q7Z443 1732 aa16.81■□□□□ 0.28
FANCA-229ENST00000567988 NHSQ6T4R5 1651 aa16.81■□□□□ 0.28
FANCA-229ENST00000567988 COL3A1P02461 1466 aaPredicted RBP16.8■□□□□ 0.28
FANCA-229ENST00000567988 IGSF1Q8N6C5 1336 aa16.8■□□□□ 0.28
FANCA-229ENST00000567988 PTF1AQ7RTS3 328 aa16.8■□□□□ 0.28
FANCA-229ENST00000567988 CAMKK2Q96RR4 588 aa16.8■□□□□ 0.28
FANCA-229ENST00000567988 RREB1Q92766 1687 aa16.8■□□□□ 0.28
FANCA-229ENST00000567988 PARD3Q8TEW0 1356 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms