RNA–Protein interactions for RNA: ENST00000567868.5

SPSB3-209, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-209ENST00000567868 KIAA0232Q92628 1395 aa29.93■■■□□ 2.38
SPSB3-209ENST00000567868 ABCA3Q99758 1704 aa29.93■■■□□ 2.38
SPSB3-209ENST00000567868 SHPRHQ149N8 1683 aa29.9■■■□□ 2.38
SPSB3-209ENST00000567868 PRDM11Q9NQV5 511 aa29.9■■■□□ 2.38
SPSB3-209ENST00000567868 IL13P35225 146 aa29.89■■■□□ 2.38
SPSB3-209ENST00000567868 EIF4A2Q14240 407 aaKnown RBP29.89■■■□□ 2.37
SPSB3-209ENST00000567868 CHRNA2Q15822 529 aa29.88■■■□□ 2.37
SPSB3-209ENST00000567868 BLMP54132 1417 aaPredicted RBP29.87■■■□□ 2.37
SPSB3-209ENST00000567868 U2SURPO15042 1029 aaKnown RBP29.86■■■□□ 2.37
SPSB3-209ENST00000567868 NUTM2BA6NNL0 878 aaPredicted RBP29.85■■■□□ 2.37
SPSB3-209ENST00000567868 NUTM2EB1AL46 878 aaPredicted RBP29.85■■■□□ 2.37
SPSB3-209ENST00000567868 NUTM2AQ8IVF1 878 aaPredicted RBP29.85■■■□□ 2.37
SPSB3-209ENST00000567868 ADAMTS8Q9UP79 889 aa29.85■■■□□ 2.37
SPSB3-209ENST00000567868 AXIN2Q9Y2T1 843 aa29.85■■■□□ 2.37
SPSB3-209ENST00000567868 ABCC6O95255 1503 aa29.85■■■□□ 2.37
SPSB3-209ENST00000567868 FBXO41Q8TF61 875 aa29.85■■■□□ 2.37
SPSB3-209ENST00000567868 SPATA31A6Q5VVP1 1343 aa29.85■■■□□ 2.37
SPSB3-209ENST00000567868 U2AF1L5P0DN76 240 aaPredicted RBP29.84■■■□□ 2.37
SPSB3-209ENST00000567868 U2AF1Q01081 240 aaKnown RBP eCLIP29.84■■■□□ 2.37
SPSB3-209ENST00000567868 FAM83GA6ND36 823 aa29.83■■■□□ 2.37
SPSB3-209ENST00000567868 LTV1Q96GA3 475 aaPredicted RBP29.83■■■□□ 2.37
SPSB3-209ENST00000567868 COL18A1P39060 1754 aa29.82■■■□□ 2.36
SPSB3-209ENST00000567868 ANKRD24Q8TF21 1146 aa29.81■■■□□ 2.36
SPSB3-209ENST00000567868 ADAMTS2O95450 1211 aa29.8■■■□□ 2.36
SPSB3-209ENST00000567868 ERBB3P21860 1342 aa29.76■■■□□ 2.36
SPSB3-209ENST00000567868 EYA1Q99502 592 aa29.76■■■□□ 2.35
SPSB3-209ENST00000567868 LMO7Q8WWI1 1683 aa29.75■■■□□ 2.35
SPSB3-209ENST00000567868 RGPD5Q99666 1765 aa29.75■■■□□ 2.35
SPSB3-209ENST00000567868 PNNQ9H307 717 aaKnown RBP29.74■■■□□ 2.35
SPSB3-209ENST00000567868 CAMTA1Q9Y6Y1 1673 aa29.74■■■□□ 2.35
SPSB3-209ENST00000567868 COL14A1Q05707 1796 aaKnown RBP29.74■■■□□ 2.35
SPSB3-209ENST00000567868 FCHSD2O94868 740 aa29.74■■■□□ 2.35
SPSB3-209ENST00000567868 IGSF1Q8N6C5 1336 aa29.73■■■□□ 2.35
SPSB3-209ENST00000567868 CSB-PGBD3P0DP91 1061 aa29.73■■■□□ 2.35
SPSB3-209ENST00000567868 HMOX1P09601 288 aa29.72■■■□□ 2.35
SPSB3-209ENST00000567868 BTG4Q9NY30 223 aa29.72■■■□□ 2.35
SPSB3-209ENST00000567868 EVA1CP58658 441 aa29.71■■■□□ 2.35
SPSB3-209ENST00000567868 SULT6B1Q6IMI4 303 aa29.71■■■□□ 2.35
SPSB3-209ENST00000567868 NBPF6Q5VWK0 638 aa29.71■■■□□ 2.35
SPSB3-209ENST00000567868 NBPF4Q96M43 638 aa29.71■■■□□ 2.35
SPSB3-209ENST00000567868 RGPD1P0DJD0 1748 aa29.7■■■□□ 2.35
SPSB3-209ENST00000567868 COL5A2P05997 1499 aaPredicted RBP29.69■■■□□ 2.34
SPSB3-209ENST00000567868 CCDC146Q8IYE0 955 aa29.69■■■□□ 2.34
SPSB3-209ENST00000567868 RUNDC1Q96C34 613 aa29.69■■■□□ 2.34
SPSB3-209ENST00000567868 RSPH6AQ9H0K4 717 aa29.69■■■□□ 2.34
SPSB3-209ENST00000567868 YTHDC1Q96MU7 727 aaKnown RBP29.68■■■□□ 2.34
SPSB3-209ENST00000567868 WDR17Q8IZU2 1322 aa29.68■■■□□ 2.34
SPSB3-209ENST00000567868 NLRP2Q9NX02 1062 aa29.67■■■□□ 2.34
SPSB3-209ENST00000567868 LRP6O75581 1613 aa29.67■■■□□ 2.34
SPSB3-209ENST00000567868 AEBP1Q8IUX7 1158 aa29.67■■■□□ 2.34
SPSB3-209ENST00000567868 STRN4Q9NRL3 753 aa29.67■■■□□ 2.34
SPSB3-209ENST00000567868 PRKAR2BP31323 418 aa29.66■■■□□ 2.34
SPSB3-209ENST00000567868 PLEKHF1Q96S99 279 aa29.66■■■□□ 2.34
SPSB3-209ENST00000567868 KDRP35968 1356 aa29.66■■■□□ 2.34
SPSB3-209ENST00000567868 NGLY1Q96IV0 654 aa29.65■■■□□ 2.34
SPSB3-209ENST00000567868 NEFMP07197 916 aa29.64■■■□□ 2.34
SPSB3-209ENST00000567868 MEX3CQ5U5Q3 659 aaKnown RBP29.64■■■□□ 2.34
SPSB3-209ENST00000567868 TOM1L2Q6ZVM7 507 aa29.64■■■□□ 2.34
SPSB3-209ENST00000567868 USHBP1Q8N6Y0 703 aa29.64■■■□□ 2.34
SPSB3-209ENST00000567868 C8orf37Q96NL8 207 aa29.64■■■□□ 2.34
SPSB3-209ENST00000567868 HNRNPUQ00839 825 aaKnown RBP eCLIP29.63■■■□□ 2.33
SPSB3-209ENST00000567868 FAM208AQ9UK61 1670 aaKnown RBP29.63■■■□□ 2.33
SPSB3-209ENST00000567868 LARP1Q6PKG0 1096 aaKnown RBP29.62■■■□□ 2.33
SPSB3-209ENST00000567868 MAPK8IP3Q9UPT6 1336 aa29.62■■■□□ 2.33
SPSB3-209ENST00000567868 SLIT2O94813 1529 aa29.62■■■□□ 2.33
SPSB3-209ENST00000567868 RGPD2P0DJD1 1756 aa29.61■■■□□ 2.33
SPSB3-209ENST00000567868 NCAPD2Q15021 1401 aa29.61■■■□□ 2.33
SPSB3-209ENST00000567868 PLCH1Q4KWH8 1693 aa29.61■■■□□ 2.33
SPSB3-209ENST00000567868 APAF1O14727 1248 aa29.6■■■□□ 2.33
SPSB3-209ENST00000567868 FNBP4Q8N3X1 1017 aaPredicted RBP29.59■■■□□ 2.33
SPSB3-209ENST00000567868 CARD10Q9BWT7 1032 aa29.59■■■□□ 2.33
SPSB3-209ENST00000567868 CRB1P82279 1406 aa29.58■■■□□ 2.33
SPSB3-209ENST00000567868 TCP11L2Q8N4U5 519 aa29.57■■■□□ 2.32
SPSB3-209ENST00000567868 NWD2Q9ULI1 1742 aa29.57■■■□□ 2.32
SPSB3-209ENST00000567868 UNC5CLQ8IV45 518 aa29.56■■■□□ 2.32
SPSB3-209ENST00000567868 PHACTR3Q96KR7 559 aa29.56■■■□□ 2.32
SPSB3-209ENST00000567868 SENP3-EIF4A1A0A087X0R7 540 aa29.54■■■□□ 2.32
SPSB3-209ENST00000567868 RAPGEF4Q8WZA2 1011 aa29.53■■■□□ 2.32
SPSB3-209ENST00000567868 NRAPQ86VF7 1730 aa29.53■■■□□ 2.32
SPSB3-209ENST00000567868 NGEFQ8N5V2 710 aa29.53■■■□□ 2.32
SPSB3-209ENST00000567868 USP21Q9UK80 565 aa29.52■■■□□ 2.32
SPSB3-209ENST00000567868 BCL9LQ86UU0 1499 aa29.52■■■□□ 2.32
SPSB3-209ENST00000567868 TMPOP42166 694 aaKnown RBP29.51■■■□□ 2.31
SPSB3-209ENST00000567868 TATP17735 454 aaPredicted RBP29.5■■■□□ 2.31
SPSB3-209ENST00000567868 SALL2Q9Y467 1007 aaPredicted RBP29.5■■■□□ 2.31
SPSB3-209ENST00000567868 NFE2L2Q16236 605 aa29.49■■■□□ 2.31
SPSB3-209ENST00000567868 NCBP3Q53F19 620 aaKnown RBP29.49■■■□□ 2.31
SPSB3-209ENST00000567868 USP35Q9P2H5 1018 aa29.49■■■□□ 2.31
SPSB3-209ENST00000567868 RRP7AQ9Y3A4 280 aaKnown RBP29.49■■■□□ 2.31
SPSB3-209ENST00000567868 AFF2P51816 1311 aa29.49■■■□□ 2.31
SPSB3-209ENST00000567868 NEUROD2Q15784 382 aa29.49■■■□□ 2.31
SPSB3-209ENST00000567868 PLEKHO1Q53GL0 409 aaPredicted RBP29.48■■■□□ 2.31
SPSB3-209ENST00000567868 VPS72Q15906 364 aa29.47■■■□□ 2.31
SPSB3-209ENST00000567868 AMOTQ4VCS5 1084 aa29.47■■■□□ 2.31
SPSB3-209ENST00000567868 GAS2L2Q8NHY3 880 aa29.47■■■□□ 2.31
SPSB3-209ENST00000567868 ZBED9Q6R2W3 1325 aa29.47■■■□□ 2.31
SPSB3-209ENST00000567868 RIPK4P57078 832 aa29.46■■■□□ 2.31
SPSB3-209ENST00000567868 MTHFSDQ2M296 383 aaKnown RBP29.46■■■□□ 2.31
SPSB3-209ENST00000567868 CCDC9Q9Y3X0 531 aaKnown RBP29.46■■■□□ 2.31
SPSB3-209ENST00000567868 SPATA31A1Q5TZJ5 1347 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms