RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 TMEM132AQ24JP5 1023 aa8.9□□□□□ -0.98
CAPN3-217ENST00000567817 CTC1Q2NKJ3 1217 aa8.9□□□□□ -0.98
CAPN3-217ENST00000567817 CRIPAKQ8N1N5 446 aa8.9□□□□□ -0.98
CAPN3-217ENST00000567817 ARHGAP9Q9BRR9 750 aa8.9□□□□□ -0.98
CAPN3-217ENST00000567817 MAGEB6P1A0A0J9YX57 407 aa8.89□□□□□ -0.99
CAPN3-217ENST00000567817 PTK2Q05397 1052 aa8.89□□□□□ -0.99
CAPN3-217ENST00000567817 TRMT44Q8IYL2 757 aaKnown RBP8.89□□□□□ -0.99
CAPN3-217ENST00000567817 MTMR14Q8NCE2 650 aa8.89□□□□□ -0.99
CAPN3-217ENST00000567817 CDK15Q96Q40 435 aa8.89□□□□□ -0.99
CAPN3-217ENST00000567817 WASF2Q9Y6W5 498 aa8.89□□□□□ -0.99
CAPN3-217ENST00000567817 SMCPP49901 116 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-217ENST00000567817 SNRKQ9NRH2 765 aa8.88□□□□□ -0.99
CAPN3-217ENST00000567817 MAP4K5Q9Y4K4 846 aa8.88□□□□□ -0.99
CAPN3-217ENST00000567817 ADH1CP00326 375 aa8.87□□□□□ -0.99
CAPN3-217ENST00000567817 CARD14Q9BXL6 1004 aa8.87□□□□□ -0.99
CAPN3-217ENST00000567817 ERFEQ4G0M1 354 aa8.86□□□□□ -0.99
CAPN3-217ENST00000567817 HPS1Q92902 700 aa8.86□□□□□ -0.99
CAPN3-217ENST00000567817 AAASQ9NRG9 546 aa8.86□□□□□ -0.99
CAPN3-217ENST00000567817 NDUFB9Q9Y6M9 179 aa8.86□□□□□ -0.99
CAPN3-217ENST00000567817 AXIN1O15169 862 aa8.85□□□□□ -0.99
CAPN3-217ENST00000567817 ZBTB33Q86T24 672 aa8.85□□□□□ -0.99
CAPN3-217ENST00000567817 OCSTAMPQ9BR26 566 aa8.85□□□□□ -0.99
CAPN3-217ENST00000567817 CDV3Q9UKY7 258 aaKnown RBP8.85□□□□□ -0.99
CAPN3-217ENST00000567817 NR5A1Q13285 461 aa8.84□□□□□ -0.99
CAPN3-217ENST00000567817 NNTQ13423 1086 aa8.84□□□□□ -0.99
CAPN3-217ENST00000567817 ARID5BQ14865 1188 aa8.84□□□□□ -0.99
CAPN3-217ENST00000567817 SLC10A4Q96EP9 437 aa8.84□□□□□ -0.99
CAPN3-217ENST00000567817 ABCC8Q09428 1581 aa8.83□□□□□ -1
CAPN3-217ENST00000567817 ST8SIA5O15466 376 aa8.83□□□□□ -1
CAPN3-217ENST00000567817 ADAM32Q8TC27 787 aa8.83□□□□□ -1
CAPN3-217ENST00000567817 ZNF608Q9ULD9 1512 aaPredicted RBP8.83□□□□□ -1
CAPN3-217ENST00000567817 ZBBXA8MT70 800 aa8.82□□□□□ -1
CAPN3-217ENST00000567817 MCM6Q14566 821 aa8.82□□□□□ -1
CAPN3-217ENST00000567817 VASH1Q7L8A9 365 aaPredicted RBP8.82□□□□□ -1
CAPN3-217ENST00000567817 PRM3Q9NNZ6 103 aa8.82□□□□□ -1
CAPN3-217ENST00000567817 EIF4G3O43432 1585 aaKnown RBP8.82□□□□□ -1
CAPN3-217ENST00000567817 GPR37L1O60883 481 aa8.81□□□□□ -1
CAPN3-217ENST00000567817 FSHRP23945 695 aa8.81□□□□□ -1
CAPN3-217ENST00000567817 GRM5P41594 1212 aa8.81□□□□□ -1
CAPN3-217ENST00000567817 PRDM2Q13029 1718 aa8.8□□□□□ -1
CAPN3-217ENST00000567817 FBXO45P0C2W1 286 aa8.79□□□□□ -1
CAPN3-217ENST00000567817 NBPF20Q3BBV1 942 aa8.79□□□□□ -1
CAPN3-217ENST00000567817 CHD1O14646 1710 aa8.79□□□□□ -1
CAPN3-217ENST00000567817 NR3C2P08235 984 aa8.78□□□□□ -1
CAPN3-217ENST00000567817 NR1H3Q13133 447 aa8.78□□□□□ -1
CAPN3-217ENST00000567817 DZIP3Q86Y13 1208 aaKnown RBP8.78□□□□□ -1
CAPN3-217ENST00000567817 KCTD15Q96SI1 283 aaPredicted RBP8.78□□□□□ -1
CAPN3-217ENST00000567817 TBC1D2BQ9UPU7 963 aa8.78□□□□□ -1
CAPN3-217ENST00000567817 CAPN5O15484 640 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-217ENST00000567817 TIMP2P16035 220 aa8.77□□□□□ -1.01
CAPN3-217ENST00000567817 WDR4P57081 412 aaKnown RBP8.77□□□□□ -1.01
CAPN3-217ENST00000567817 CCDC116Q8IYX3 515 aa8.77□□□□□ -1.01
CAPN3-217ENST00000567817 ZNF592Q92610 1267 aa8.77□□□□□ -1.01
CAPN3-217ENST00000567817 KLF16Q9BXK1 252 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-217ENST00000567817 ZNF330Q9Y3S2 320 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-217ENST00000567817 WIZO95785 1651 aa8.77□□□□□ -1.01
CAPN3-217ENST00000567817 TOPBP1Q92547 1522 aa8.76□□□□□ -1.01
CAPN3-217ENST00000567817 FLIIQ13045 1269 aa8.76□□□□□ -1.01
CAPN3-217ENST00000567817 DACH1Q9UI36 760 aa8.76□□□□□ -1.01
CAPN3-217ENST00000567817 MCCD1P59942 119 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-217ENST00000567817 DHX9Q08211 1270 aaKnown RBP8.75□□□□□ -1.01
CAPN3-217ENST00000567817 ATP13A2Q9NQ11 1180 aa8.75□□□□□ -1.01
CAPN3-217ENST00000567817 EMILIN1Q9Y6C2 1016 aa8.75□□□□□ -1.01
CAPN3-217ENST00000567817 WDR97A6NE52 1622 aa8.75□□□□□ -1.01
CAPN3-217ENST00000567817 SUPT5HO00267 1087 aaKnown RBP8.74□□□□□ -1.01
CAPN3-217ENST00000567817 ZIC2O95409 532 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-217ENST00000567817 INTS6LQ5JSJ4 861 aaKnown RBP8.74□□□□□ -1.01
CAPN3-217ENST00000567817 ITPKCQ96DU7 683 aa8.74□□□□□ -1.01
CAPN3-217ENST00000567817 PCDHB9Q9Y5E1 797 aa8.74□□□□□ -1.01
CAPN3-217ENST00000567817 TOP2AP11388 1531 aaKnown RBP8.74□□□□□ -1.01
CAPN3-217ENST00000567817 CLASP1Q7Z460 1538 aa8.74□□□□□ -1.01
CAPN3-217ENST00000567817 SYNJ1O43426 1573 aa8.73□□□□□ -1.01
CAPN3-217ENST00000567817 ESPNB1AK53 854 aa8.73□□□□□ -1.01
CAPN3-217ENST00000567817 ZNF787Q6DD87 383 aa8.73□□□□□ -1.01
CAPN3-217ENST00000567817 SEPT12Q8IYM1 358 aa8.73□□□□□ -1.01
CAPN3-217ENST00000567817 GDPD2Q9HCC8 539 aa8.73□□□□□ -1.01
CAPN3-217ENST00000567817 DNMBPQ6XZF7 1577 aa8.73□□□□□ -1.01
CAPN3-217ENST00000567817 PPP1R26Q5T8A7 1209 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-217ENST00000567817 PGPEP1Q9NXJ5 209 aa8.72□□□□□ -1.01
CAPN3-217ENST00000567817 TARBP1Q13395 1621 aaKnown RBP8.72□□□□□ -1.01
CAPN3-217ENST00000567817 ABL2P42684 1182 aa8.71□□□□□ -1.02
CAPN3-217ENST00000567817 IRF5Q13568 498 aa8.71□□□□□ -1.02
CAPN3-217ENST00000567817 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.02
CAPN3-217ENST00000567817 SENP2Q9HC62 589 aa8.71□□□□□ -1.02
CAPN3-217ENST00000567817 GMPR2Q9P2T1 348 aaKnown RBP8.71□□□□□ -1.02
CAPN3-217ENST00000567817 COG6Q9Y2V7 657 aa8.71□□□□□ -1.02
CAPN3-217ENST00000567817 BMP1P13497 986 aa8.7□□□□□ -1.02
CAPN3-217ENST00000567817 TRIM46Q7Z4K8 759 aa8.7□□□□□ -1.02
CAPN3-217ENST00000567817 CCDC125Q86Z20 511 aa8.7□□□□□ -1.02
CAPN3-217ENST00000567817 KIFC2Q96AC6 838 aa8.7□□□□□ -1.02
CAPN3-217ENST00000567817 AQRO60306 1485 aaKnown RBP eCLIP8.7□□□□□ -1.02
CAPN3-217ENST00000567817 WASHC4Q2M389 1173 aa8.69□□□□□ -1.02
CAPN3-217ENST00000567817 MRPL14Q6P1L8 145 aaKnown RBP8.69□□□□□ -1.02
CAPN3-217ENST00000567817 MEIOBQ8N635 442 aa8.69□□□□□ -1.02
CAPN3-217ENST00000567817 TRIM52Q96A61 297 aa8.69□□□□□ -1.02
CAPN3-217ENST00000567817 TRIM47Q96LD4 638 aa8.69□□□□□ -1.02
CAPN3-217ENST00000567817 MAGI1Q96QZ7 1491 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-217ENST00000567817 POTECB2RU33 542 aa8.68□□□□□ -1.02
CAPN3-217ENST00000567817 EIF4G2P78344 907 aaKnown RBP eCLIP8.68□□□□□ -1.02
CAPN3-217ENST00000567817 C11orf95C9JLR9 678 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms