RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 NFAT5O94916 1531 aa20.69■□□□□ 0.9
COMMD4-219ENST00000567399 RRS1Q15050 365 aaKnown RBP20.69■□□□□ 0.9
COMMD4-219ENST00000567399 USP35Q9P2H5 1018 aa20.69■□□□□ 0.9
COMMD4-219ENST00000567399 PPM1GO15355 546 aaPredicted RBP20.68■□□□□ 0.9
COMMD4-219ENST00000567399 TOM1L2Q6ZVM7 507 aa20.68■□□□□ 0.9
COMMD4-219ENST00000567399 AXIN2Q9Y2T1 843 aa20.68■□□□□ 0.9
COMMD4-219ENST00000567399 CAMTA1Q9Y6Y1 1673 aa20.67■□□□□ 0.9
COMMD4-219ENST00000567399 LARP1Q6PKG0 1096 aaKnown RBP20.67■□□□□ 0.9
COMMD4-219ENST00000567399 NSD2O96028 1365 aa20.67■□□□□ 0.9
COMMD4-219ENST00000567399 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.67■□□□□ 0.9
COMMD4-219ENST00000567399 CC2D1BQ5T0F9 858 aaKnown RBP20.66■□□□□ 0.9
COMMD4-219ENST00000567399 MAP3K19Q56UN5 1328 aa20.66■□□□□ 0.9
COMMD4-219ENST00000567399 IP6K1Q92551 441 aa20.65■□□□□ 0.9
COMMD4-219ENST00000567399 LTV1Q96GA3 475 aaPredicted RBP20.65■□□□□ 0.9
COMMD4-219ENST00000567399 SPATA31A5Q5VU36 1347 aa20.64■□□□□ 0.89
COMMD4-219ENST00000567399 SPATA31A7Q8IWB4 1347 aa20.64■□□□□ 0.89
COMMD4-219ENST00000567399 PER1O15534 1290 aaPredicted RBP20.64■□□□□ 0.89
COMMD4-219ENST00000567399 NRAPQ86VF7 1730 aa20.64■□□□□ 0.89
COMMD4-219ENST00000567399 COL5A2P05997 1499 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-219ENST00000567399 FAM98CQ17RN3 349 aaKnown RBP20.63■□□□□ 0.89
COMMD4-219ENST00000567399 AMER1Q5JTC6 1135 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-219ENST00000567399 ANKRD24Q8TF21 1146 aa20.63■□□□□ 0.89
COMMD4-219ENST00000567399 LMO7Q8WWI1 1683 aa20.63■□□□□ 0.89
COMMD4-219ENST00000567399 LTN1O94822 1766 aa20.62■□□□□ 0.89
COMMD4-219ENST00000567399 SPATA31A1Q5TZJ5 1347 aa20.62■□□□□ 0.89
COMMD4-219ENST00000567399 WDR17Q8IZU2 1322 aa20.62■□□□□ 0.89
COMMD4-219ENST00000567399 HOXC9P31274 260 aa20.62■□□□□ 0.89
COMMD4-219ENST00000567399 DDX10Q13206 875 aaKnown RBP20.62■□□□□ 0.89
COMMD4-219ENST00000567399 TCP11L2Q8N4U5 519 aa20.61■□□□□ 0.89
COMMD4-219ENST00000567399 NLRP2Q9NX02 1062 aa20.61■□□□□ 0.89
COMMD4-219ENST00000567399 CRB1P82279 1406 aa20.61■□□□□ 0.89
COMMD4-219ENST00000567399 SEPT12Q8IYM1 358 aa20.6■□□□□ 0.89
COMMD4-219ENST00000567399 EMILIN1Q9Y6C2 1016 aa20.6■□□□□ 0.89
COMMD4-219ENST00000567399 BLMP54132 1417 aaPredicted RBP20.6■□□□□ 0.89
COMMD4-219ENST00000567399 COL18A1P39060 1754 aa20.59■□□□□ 0.89
COMMD4-219ENST00000567399 ABCC6O95255 1503 aa20.59■□□□□ 0.89
COMMD4-219ENST00000567399 CDK12Q9NYV4 1490 aaPredicted RBP20.59■□□□□ 0.89
COMMD4-219ENST00000567399 THRAP3Q9Y2W1 955 aaKnown RBP20.59■□□□□ 0.89
COMMD4-219ENST00000567399 RTL1A6NKG5 1358 aa20.59■□□□□ 0.89
COMMD4-219ENST00000567399 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.89
COMMD4-219ENST00000567399 GLI3P10071 1580 aa20.58■□□□□ 0.88
COMMD4-219ENST00000567399 ANKRD26Q9UPS8 1709 aa20.58■□□□□ 0.88
COMMD4-219ENST00000567399 FLT4P35916 1363 aa20.58■□□□□ 0.88
COMMD4-219ENST00000567399 ERBB3P21860 1342 aa20.57■□□□□ 0.88
COMMD4-219ENST00000567399 RGS12O14924 1447 aa20.57■□□□□ 0.88
COMMD4-219ENST00000567399 SMG6Q86US8 1419 aaKnown RBP20.57■□□□□ 0.88
COMMD4-219ENST00000567399 CARD10Q9BWT7 1032 aa20.57■□□□□ 0.88
COMMD4-219ENST00000567399 POLKQ9UBT6 870 aa20.57■□□□□ 0.88
COMMD4-219ENST00000567399 RGPD5Q99666 1765 aa20.57■□□□□ 0.88
COMMD4-219ENST00000567399 HSP90AB2PQ58FF8 381 aa20.56■□□□□ 0.88
COMMD4-219ENST00000567399 KIF24Q5T7B8 1368 aa20.56■□□□□ 0.88
COMMD4-219ENST00000567399 BARGINQ6ZT62 677 aa20.55■□□□□ 0.88
COMMD4-219ENST00000567399 ONECUT3O60422 494 aaPredicted RBP20.54■□□□□ 0.88
COMMD4-219ENST00000567399 NPC1L1Q9UHC9 1359 aa20.54■□□□□ 0.88
COMMD4-219ENST00000567399 INSRP06213 1382 aa20.53■□□□□ 0.88
COMMD4-219ENST00000567399 PDE3BQ13370 1112 aa20.52■□□□□ 0.88
COMMD4-219ENST00000567399 MAP2P11137 1827 aaKnown RBP20.51■□□□□ 0.87
COMMD4-219ENST00000567399 KRT27Q7Z3Y8 459 aa20.51■□□□□ 0.87
COMMD4-219ENST00000567399 CDCA7Q9BWT1 371 aaPredicted RBP20.51■□□□□ 0.87
COMMD4-219ENST00000567399 MTHFSP49914 203 aa20.49■□□□□ 0.87
COMMD4-219ENST00000567399 SOCS7O14512 581 aa20.48■□□□□ 0.87
COMMD4-219ENST00000567399 DDB1Q16531 1140 aa20.48■□□□□ 0.87
COMMD4-219ENST00000567399 PEAK1Q9H792 1746 aa20.47■□□□□ 0.87
COMMD4-219ENST00000567399 EXOC5O00471 708 aa20.47■□□□□ 0.87
COMMD4-219ENST00000567399 IL2RBP14784 551 aa20.47■□□□□ 0.87
COMMD4-219ENST00000567399 NBPF6Q5VWK0 638 aa20.47■□□□□ 0.87
COMMD4-219ENST00000567399 NBPF4Q96M43 638 aa20.47■□□□□ 0.87
COMMD4-219ENST00000567399 USHBP1Q8N6Y0 703 aa20.46■□□□□ 0.87
COMMD4-219ENST00000567399 EIF4A2Q14240 407 aaKnown RBP20.45■□□□□ 0.86
COMMD4-219ENST00000567399 RAPGEF4Q8WZA2 1011 aa20.44■□□□□ 0.86
COMMD4-219ENST00000567399 CFAP53Q96M91 514 aa20.44■□□□□ 0.86
COMMD4-219ENST00000567399 FAM208AQ9UK61 1670 aaKnown RBP20.44■□□□□ 0.86
COMMD4-219ENST00000567399 TATP17735 454 aaPredicted RBP20.42■□□□□ 0.86
COMMD4-219ENST00000567399 FAM182BQ5T319 152 aa20.42■□□□□ 0.86
COMMD4-219ENST00000567399 THSD7AQ9UPZ6 1657 aa20.42■□□□□ 0.86
COMMD4-219ENST00000567399 PPP2R1AP30153 589 aa20.41■□□□□ 0.86
COMMD4-219ENST00000567399 EYA1Q99502 592 aa20.41■□□□□ 0.86
COMMD4-219ENST00000567399 DIAPH1O60610 1272 aaKnown RBP20.4■□□□□ 0.86
COMMD4-219ENST00000567399 RALBP1Q15311 655 aa20.4■□□□□ 0.86
COMMD4-219ENST00000567399 BRWD3Q6RI45 1802 aa20.4■□□□□ 0.86
COMMD4-219ENST00000567399 FAM196AQ6ZSG2 479 aa20.39■□□□□ 0.85
COMMD4-219ENST00000567399 SF3B2Q13435 895 aaKnown RBP20.38■□□□□ 0.85
COMMD4-219ENST00000567399 DDX54Q8TDD1 881 aaKnown RBP20.38■□□□□ 0.85
COMMD4-219ENST00000567399 RGPD2P0DJD1 1756 aa20.38■□□□□ 0.85
COMMD4-219ENST00000567399 DISP2A7MBM2 1401 aa20.37■□□□□ 0.85
COMMD4-219ENST00000567399 ZCRB1Q8TBF4 217 aaKnown RBP20.37■□□□□ 0.85
COMMD4-219ENST00000567399 UPF1Q92900 1129 aaKnown RBP eCLIP20.37■□□□□ 0.85
COMMD4-219ENST00000567399 PARP4Q9UKK3 1724 aaKnown RBP20.36■□□□□ 0.85
COMMD4-219ENST00000567399 U2SURPO15042 1029 aaKnown RBP20.36■□□□□ 0.85
COMMD4-219ENST00000567399 IL13P35225 146 aa20.36■□□□□ 0.85
COMMD4-219ENST00000567399 PARD3Q8TEW0 1356 aa20.35■□□□□ 0.85
COMMD4-219ENST00000567399 NUDCQ9Y266 331 aa20.35■□□□□ 0.85
COMMD4-219ENST00000567399 WNK3Q9BYP7 1800 aa20.34■□□□□ 0.85
COMMD4-219ENST00000567399 SULT6B1Q6IMI4 303 aa20.34■□□□□ 0.85
COMMD4-219ENST00000567399 MARCH10Q8NA82 808 aaPredicted RBP20.34■□□□□ 0.85
COMMD4-219ENST00000567399 IGSF1Q8N6C5 1336 aa20.33■□□□□ 0.85
COMMD4-219ENST00000567399 CCDC125Q86Z20 511 aa20.33■□□□□ 0.85
COMMD4-219ENST00000567399 SPG7Q9UQ90 795 aa20.33■□□□□ 0.85
COMMD4-219ENST00000567399 LRRC37A3O60309 1634 aa20.33■□□□□ 0.84
COMMD4-219ENST00000567399 TNS2Q63HR2 1409 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms