RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 EMILIN1Q9Y6C2 1016 aa8.17□□□□□ -1.1
CDH1-211ENST00000567320 PTK2Q05397 1052 aa8.16□□□□□ -1.1
CDH1-211ENST00000567320 PPP2R2DQ66LE6 453 aa8.16□□□□□ -1.1
CDH1-211ENST00000567320 LINC00528Q8N1L1 170 aa8.16□□□□□ -1.1
CDH1-211ENST00000567320 WIPF1O43516 503 aa8.15□□□□□ -1.1
CDH1-211ENST00000567320 PCMTD1Q96MG8 357 aaPredicted RBP8.15□□□□□ -1.1
CDH1-211ENST00000567320 PGPEP1Q9NXJ5 209 aa8.15□□□□□ -1.1
CDH1-211ENST00000567320 LCE2CQ5TA81 110 aa8.14□□□□□ -1.11
CDH1-211ENST00000567320 NPAS3Q8IXF0 933 aa8.14□□□□□ -1.11
CDH1-211ENST00000567320 MEIOBQ8N635 442 aa8.14□□□□□ -1.11
CDH1-211ENST00000567320 KCTD15Q96SI1 283 aaPredicted RBP8.14□□□□□ -1.11
CDH1-211ENST00000567320 ZC3H4Q9UPT8 1303 aaKnown RBP8.13□□□□□ -1.11
CDH1-211ENST00000567320 H3BM21 787 aa8.13□□□□□ -1.11
CDH1-211ENST00000567320 USP17L8P0C7I0 530 aa8.13□□□□□ -1.11
CDH1-211ENST00000567320 GMPRP36959 345 aa8.13□□□□□ -1.11
CDH1-211ENST00000567320 RAB15P59190 212 aa8.13□□□□□ -1.11
CDH1-211ENST00000567320 PPP1R26Q5T8A7 1209 aaPredicted RBP8.13□□□□□ -1.11
CDH1-211ENST00000567320 IL27Q8NEV9 243 aa8.13□□□□□ -1.11
CDH1-211ENST00000567320 TSEN34Q9BSV6 310 aaKnown RBP8.13□□□□□ -1.11
CDH1-211ENST00000567320 STK17AQ9UEE5 414 aa8.13□□□□□ -1.11
CDH1-211ENST00000567320 CDV3Q9UKY7 258 aaKnown RBP8.13□□□□□ -1.11
CDH1-211ENST00000567320 RFC5P40937 340 aa8.12□□□□□ -1.11
CDH1-211ENST00000567320 EPS8L1Q8TE68 723 aa8.12□□□□□ -1.11
CDH1-211ENST00000567320 HMX1Q9NP08 348 aaPredicted RBP8.12□□□□□ -1.11
CDH1-211ENST00000567320 DHX9Q08211 1270 aaKnown RBP8.11□□□□□ -1.11
CDH1-211ENST00000567320 ADAM32Q8TC27 787 aa8.11□□□□□ -1.11
CDH1-211ENST00000567320 CBLBQ13191 982 aa8.1□□□□□ -1.11
CDH1-211ENST00000567320 DZIP3Q86Y13 1208 aaKnown RBP8.1□□□□□ -1.11
CDH1-211ENST00000567320 ERBB4Q15303 1308 aa8.09□□□□□ -1.11
CDH1-211ENST00000567320 NBPF20Q3BBV1 942 aa8.09□□□□□ -1.11
CDH1-211ENST00000567320 GPSM3Q9Y4H4 160 aa8.09□□□□□ -1.11
CDH1-211ENST00000567320 FIGNL2A6NMB9 653 aa8.08□□□□□ -1.12
CDH1-211ENST00000567320 TTLL8A6PVC2 850 aa8.08□□□□□ -1.12
CDH1-211ENST00000567320 SOS2Q07890 1332 aaPredicted RBP8.07□□□□□ -1.12
CDH1-211ENST00000567320 FAM181BA6NEQ2 426 aa8.07□□□□□ -1.12
CDH1-211ENST00000567320 TMEM259Q4ZIN3 620 aa8.07□□□□□ -1.12
CDH1-211ENST00000567320 DNMT3LQ9UJW3 386 aa8.07□□□□□ -1.12
CDH1-211ENST00000567320 RELBQ01201 579 aa8.06□□□□□ -1.12
CDH1-211ENST00000567320 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.06□□□□□ -1.12
CDH1-211ENST00000567320 INTS6LQ5JSJ4 861 aaKnown RBP8.06□□□□□ -1.12
CDH1-211ENST00000567320 ZSCAN1Q8NBB4 408 aa8.06□□□□□ -1.12
CDH1-211ENST00000567320 AGBL1Q96MI9 1066 aa8.06□□□□□ -1.12
CDH1-211ENST00000567320 OCSTAMPQ9BR26 566 aa8.06□□□□□ -1.12
CDH1-211ENST00000567320 GOPCQ9HD26 462 aa8.06□□□□□ -1.12
CDH1-211ENST00000567320 Q6ZVU0 165 aa8.05□□□□□ -1.12
CDH1-211ENST00000567320 TMPRSS4Q9NRS4 437 aa8.05□□□□□ -1.12
CDH1-211ENST00000567320 PPFIA3O75145 1194 aa8.04□□□□□ -1.12
CDH1-211ENST00000567320 POLMQ9NP87 494 aaPredicted RBP8.04□□□□□ -1.12
CDH1-211ENST00000567320 ZNF395Q9H8N7 513 aaPredicted RBP8.03□□□□□ -1.12
CDH1-211ENST00000567320 SPINT1O43278 529 aa8.02□□□□□ -1.13
CDH1-211ENST00000567320 PTSQ03393 145 aa8.02□□□□□ -1.13
CDH1-211ENST00000567320 ZNF784Q8NCA9 323 aaPredicted RBP8.02□□□□□ -1.13
CDH1-211ENST00000567320 INSM2Q96T92 566 aaPredicted RBP8.02□□□□□ -1.13
CDH1-211ENST00000567320 PCDHB9Q9Y5E1 797 aa8.02□□□□□ -1.13
CDH1-211ENST00000567320 ERVH48-1M5A8F1 160 aa8.01□□□□□ -1.13
CDH1-211ENST00000567320 BRPF1P55201 1214 aaPredicted RBP8.01□□□□□ -1.13
CDH1-211ENST00000567320 TRIM34Q9BYJ4 488 aa8.01□□□□□ -1.13
CDH1-211ENST00000567320 ZBBXA8MT70 800 aa8□□□□□ -1.13
CDH1-211ENST00000567320 CTSOP43234 321 aaPredicted RBP8□□□□□ -1.13
CDH1-211ENST00000567320 TPRNQ4KMQ1 711 aa7.99□□□□□ -1.13
CDH1-211ENST00000567320 TRIM52Q96A61 297 aa7.99□□□□□ -1.13
CDH1-211ENST00000567320 CYLDQ9NQC7 956 aa7.99□□□□□ -1.13
CDH1-211ENST00000567320 VSIG8P0DPA2 414 aa7.98□□□□□ -1.13
CDH1-211ENST00000567320 CCDC155Q8N6L0 562 aa7.98□□□□□ -1.13
CDH1-211ENST00000567320 ADH1AP07327 375 aa7.97□□□□□ -1.13
CDH1-211ENST00000567320 CDC14CA4D256 554 aa7.96□□□□□ -1.14
CDH1-211ENST00000567320 GIGYF1O75420 1035 aaPredicted RBP7.96□□□□□ -1.14
CDH1-211ENST00000567320 FBXO45P0C2W1 286 aa7.96□□□□□ -1.14
CDH1-211ENST00000567320 ADD1P35611 737 aaKnown RBP7.96□□□□□ -1.14
CDH1-211ENST00000567320 GJD4Q96KN9 370 aaPredicted RBP7.96□□□□□ -1.14
CDH1-211ENST00000567320 ESF1Q9H501 851 aaKnown RBP7.96□□□□□ -1.14
CDH1-211ENST00000567320 ESPNB1AK53 854 aa7.95□□□□□ -1.14
CDH1-211ENST00000567320 LILRA1O75019 489 aa7.95□□□□□ -1.14
CDH1-211ENST00000567320 PTGIRP43119 386 aa7.95□□□□□ -1.14
CDH1-211ENST00000567320 SEPT12Q8IYM1 358 aa7.95□□□□□ -1.14
CDH1-211ENST00000567320 ZNF330Q9Y3S2 320 aaPredicted RBP7.95□□□□□ -1.14
CDH1-211ENST00000567320 APBB1O00213 710 aa7.94□□□□□ -1.14
CDH1-211ENST00000567320 RNF217Q8TC41 542 aa7.94□□□□□ -1.14
CDH1-211ENST00000567320 CNTNAP3BQ96NU0 1288 aa7.94□□□□□ -1.14
CDH1-211ENST00000567320 CNTNAP3Q9BZ76 1288 aa7.94□□□□□ -1.14
CDH1-211ENST00000567320 ATP5J2-PTCD1G3V325 749 aa7.93□□□□□ -1.14
CDH1-211ENST00000567320 MEN1O00255 615 aa7.93□□□□□ -1.14
CDH1-211ENST00000567320 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
CDH1-211ENST00000567320 RNF20Q5VTR2 975 aa7.93□□□□□ -1.14
CDH1-211ENST00000567320 NDUFB9Q9Y6M9 179 aa7.93□□□□□ -1.14
CDH1-211ENST00000567320 SLC35F4A4IF30 521 aa7.92□□□□□ -1.14
CDH1-211ENST00000567320 ITGA6P23229 1130 aa7.92□□□□□ -1.14
CDH1-211ENST00000567320 NR1H3Q13133 447 aa7.92□□□□□ -1.14
CDH1-211ENST00000567320 LYSMD3Q7Z3D4 306 aa7.92□□□□□ -1.14
CDH1-211ENST00000567320 PRICKLE2Q7Z3G6 844 aa7.92□□□□□ -1.14
CDH1-211ENST00000567320 VWA5B2Q8N398 1253 aa7.92□□□□□ -1.14
CDH1-211ENST00000567320 GPR161Q8N6U8 529 aaKnown RBP7.92□□□□□ -1.14
CDH1-211ENST00000567320 BANK1Q8NDB2 785 aa7.92□□□□□ -1.14
CDH1-211ENST00000567320 COL25A1Q9BXS0 654 aaPredicted RBP7.92□□□□□ -1.14
CDH1-211ENST00000567320 SV2AQ7L0J3 742 aa7.91□□□□□ -1.14
CDH1-211ENST00000567320 ZNF592Q92610 1267 aa7.91□□□□□ -1.14
CDH1-211ENST00000567320 FOXD4L5Q5VV16 416 aaPredicted RBP7.9□□□□□ -1.14
CDH1-211ENST00000567320 MTMR14Q8NCE2 650 aa7.9□□□□□ -1.14
CDH1-211ENST00000567320 SNRKQ9NRH2 765 aa7.9□□□□□ -1.14
CDH1-211ENST00000567320 PCDHB11Q9Y5F2 797 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms