RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	CCER2	I3L3R5	266 aa		12.59	□□□□□ -0.39
FANCA-223	ENST00000567284	HOXC9	P31274	260 aa		12.59	□□□□□ -0.39
FANCA-223	ENST00000567284	ARHGEF25	Q86VW2	580 aa		12.59	□□□□□ -0.39
FANCA-223	ENST00000567284	COL14A1	Q05707	1796 aa	Known RBP	12.58	□□□□□ -0.39
FANCA-223	ENST00000567284	HSP90AB2P	Q58FF8	381 aa		12.58	□□□□□ -0.4
FANCA-223	ENST00000567284	MEX3C	Q5U5Q3	659 aa	Known RBP	12.58	□□□□□ -0.4
FANCA-223	ENST00000567284	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.58	□□□□□ -0.4
FANCA-223	ENST00000567284	FLT4	P35916	1363 aa		12.57	□□□□□ -0.4
FANCA-223	ENST00000567284	SMG6	Q86US8	1419 aa	Known RBP	12.57	□□□□□ -0.4
FANCA-223	ENST00000567284	FAM9B	Q8IZU0	186 aa		12.57	□□□□□ -0.4
FANCA-223	ENST00000567284	IP6K1	Q92551	441 aa		12.57	□□□□□ -0.4
FANCA-223	ENST00000567284	FAM83G	A6ND36	823 aa		12.56	□□□□□ -0.4
FANCA-223	ENST00000567284	U2SURP	O15042	1029 aa	Known RBP	12.56	□□□□□ -0.4
FANCA-223	ENST00000567284	DIAPH1	O60610	1272 aa	Known RBP	12.56	□□□□□ -0.4
FANCA-223	ENST00000567284	AXIN2	Q9Y2T1	843 aa		12.56	□□□□□ -0.4
FANCA-223	ENST00000567284	SPATA31A6	Q5VVP1	1343 aa		12.56	□□□□□ -0.4
FANCA-223	ENST00000567284	RTL1	A6NKG5	1358 aa		12.56	□□□□□ -0.4
FANCA-223	ENST00000567284	CPD	O75976	1380 aa		12.56	□□□□□ -0.4
FANCA-223	ENST00000567284	LRP6	O75581	1613 aa		12.55	□□□□□ -0.4
FANCA-223	ENST00000567284	LMO7	Q8WWI1	1683 aa		12.55	□□□□□ -0.4
FANCA-223	ENST00000567284	COL3A1	P02461	1466 aa	Predicted RBP	12.55	□□□□□ -0.4
FANCA-223	ENST00000567284	CSB-PGBD3	P0DP91	1061 aa		12.55	□□□□□ -0.4
FANCA-223	ENST00000567284	WDR43	Q15061	677 aa	Known RBP eCLIP	12.55	□□□□□ -0.4
FANCA-223	ENST00000567284	C8orf37	Q96NL8	207 aa		12.55	□□□□□ -0.4
FANCA-223	ENST00000567284	STRN4	Q9NRL3	753 aa		12.55	□□□□□ -0.4
FANCA-223	ENST00000567284	EVA1C	P58658	441 aa		12.54	□□□□□ -0.4
FANCA-223	ENST00000567284	EIF4A2	Q14240	407 aa	Known RBP	12.54	□□□□□ -0.4
FANCA-223	ENST00000567284	ANKRD24	Q8TF21	1146 aa		12.54	□□□□□ -0.4
FANCA-223	ENST00000567284	NUDC	Q9Y266	331 aa		12.54	□□□□□ -0.4
FANCA-223	ENST00000567284	CAMTA1	Q9Y6Y1	1673 aa		12.54	□□□□□ -0.4
FANCA-223	ENST00000567284	INSR	P06213	1382 aa		12.54	□□□□□ -0.4
FANCA-223	ENST00000567284	NGLY1	Q96IV0	654 aa		12.53	□□□□□ -0.4
FANCA-223	ENST00000567284	BTG4	Q9NY30	223 aa		12.53	□□□□□ -0.4
FANCA-223	ENST00000567284	FAM208A	Q9UK61	1670 aa	Known RBP	12.53	□□□□□ -0.4
FANCA-223	ENST00000567284	NRAP	Q86VF7	1730 aa		12.53	□□□□□ -0.4
FANCA-223	ENST00000567284	KIF24	Q5T7B8	1368 aa		12.53	□□□□□ -0.4
FANCA-223	ENST00000567284	NWD2	Q9ULI1	1742 aa		12.52	□□□□□ -0.41
FANCA-223	ENST00000567284	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.52	□□□□□ -0.41
FANCA-223	ENST00000567284	IL13	P35225	146 aa		12.52	□□□□□ -0.41
FANCA-223	ENST00000567284	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
FANCA-223	ENST00000567284	USHBP1	Q8N6Y0	703 aa		12.52	□□□□□ -0.41
FANCA-223	ENST00000567284	BLM	P54132	1417 aa	Predicted RBP	12.52	□□□□□ -0.41
FANCA-223	ENST00000567284	ABCC6	O95255	1503 aa		12.52	□□□□□ -0.41
FANCA-223	ENST00000567284	RGPD1	P0DJD0	1748 aa		12.51	□□□□□ -0.41
FANCA-223	ENST00000567284	HMOX1	P09601	288 aa		12.51	□□□□□ -0.41
FANCA-223	ENST00000567284	SENP3-EIF4A1	A0A087X0R7	540 aa		12.5	□□□□□ -0.41
FANCA-223	ENST00000567284	PNISR	Q8TF01	805 aa	Known RBP	12.5	□□□□□ -0.41
FANCA-223	ENST00000567284	EYA1	Q99502	592 aa		12.5	□□□□□ -0.41
FANCA-223	ENST00000567284	NLRP2	Q9NX02	1062 aa		12.5	□□□□□ -0.41
FANCA-223	ENST00000567284	ADAMTS8	Q9UP79	889 aa		12.5	□□□□□ -0.41
FANCA-223	ENST00000567284	COL5A2	P05997	1499 aa	Predicted RBP	12.5	□□□□□ -0.41
FANCA-223	ENST00000567284	TOM1L2	Q6ZVM7	507 aa		12.49	□□□□□ -0.41
FANCA-223	ENST00000567284	CCDC146	Q8IYE0	955 aa		12.49	□□□□□ -0.41
FANCA-223	ENST00000567284	CCDC9	Q9Y3X0	531 aa	Known RBP	12.49	□□□□□ -0.41
FANCA-223	ENST00000567284	ERBB3	P21860	1342 aa		12.48	□□□□□ -0.41
FANCA-223	ENST00000567284	NBPF6	Q5VWK0	638 aa		12.48	□□□□□ -0.41
FANCA-223	ENST00000567284	SULT6B1	Q6IMI4	303 aa		12.48	□□□□□ -0.41
FANCA-223	ENST00000567284	LARP1	Q6PKG0	1096 aa	Known RBP	12.48	□□□□□ -0.41
FANCA-223	ENST00000567284	AEBP1	Q8IUX7	1158 aa		12.48	□□□□□ -0.41
FANCA-223	ENST00000567284	NBPF4	Q96M43	638 aa		12.48	□□□□□ -0.41
FANCA-223	ENST00000567284	USP35	Q9P2H5	1018 aa		12.48	□□□□□ -0.41
FANCA-223	ENST00000567284	DLG5	Q8TDM6	1919 aa		12.47	□□□□□ -0.41
FANCA-223	ENST00000567284	AFF2	P51816	1311 aa		12.47	□□□□□ -0.41
FANCA-223	ENST00000567284	WDR17	Q8IZU2	1322 aa		12.47	□□□□□ -0.41
FANCA-223	ENST00000567284	WNK3	Q9BYP7	1800 aa		12.47	□□□□□ -0.41
FANCA-223	ENST00000567284	YTHDC1	Q96MU7	727 aa	Known RBP	12.47	□□□□□ -0.41
FANCA-223	ENST00000567284	USP21	Q9UK80	565 aa		12.47	□□□□□ -0.41
FANCA-223	ENST00000567284	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.47	□□□□□ -0.41
FANCA-223	ENST00000567284	VIRMA	Q69YN4	1812 aa	Known RBP	12.46	□□□□□ -0.41
FANCA-223	ENST00000567284	SLIT2	O94813	1529 aa		12.46	□□□□□ -0.42
FANCA-223	ENST00000567284	IGSF1	Q8N6C5	1336 aa		12.45	□□□□□ -0.42
FANCA-223	ENST00000567284	PRKAR2B	P31323	418 aa		12.45	□□□□□ -0.42
FANCA-223	ENST00000567284	UNC5CL	Q8IV45	518 aa		12.44	□□□□□ -0.42
FANCA-223	ENST00000567284	RSPH6A	Q9H0K4	717 aa		12.44	□□□□□ -0.42
FANCA-223	ENST00000567284	SALL2	Q9Y467	1007 aa	Predicted RBP	12.44	□□□□□ -0.42
FANCA-223	ENST00000567284	PARP4	Q9UKK3	1724 aa	Known RBP	12.44	□□□□□ -0.42
FANCA-223	ENST00000567284	CRB1	P82279	1406 aa		12.44	□□□□□ -0.42
FANCA-223	ENST00000567284	KAT6B	Q8WYB5	2073 aa		12.44	□□□□□ -0.42
FANCA-223	ENST00000567284	MAPK8IP3	Q9UPT6	1336 aa		12.43	□□□□□ -0.42
FANCA-223	ENST00000567284	BCL9L	Q86UU0	1499 aa		12.43	□□□□□ -0.42
FANCA-223	ENST00000567284	NEFM	P07197	916 aa		12.43	□□□□□ -0.42
FANCA-223	ENST00000567284	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.43	□□□□□ -0.42
FANCA-223	ENST00000567284	FCHSD2	O94868	740 aa		12.42	□□□□□ -0.42
FANCA-223	ENST00000567284	RUNDC1	Q96C34	613 aa		12.42	□□□□□ -0.42
FANCA-223	ENST00000567284	CARD10	Q9BWT7	1032 aa		12.42	□□□□□ -0.42
FANCA-223	ENST00000567284	PNN	Q9H307	717 aa	Known RBP	12.42	□□□□□ -0.42
FANCA-223	ENST00000567284	TAT	P17735	454 aa	Predicted RBP	12.41	□□□□□ -0.42
FANCA-223	ENST00000567284	NEUROD2	Q15784	382 aa		12.41	□□□□□ -0.42
FANCA-223	ENST00000567284	RAPGEF4	Q8WZA2	1011 aa		12.41	□□□□□ -0.42
FANCA-223	ENST00000567284	RRP7A	Q9Y3A4	280 aa	Known RBP	12.41	□□□□□ -0.42
FANCA-223	ENST00000567284	APAF1	O14727	1248 aa		12.4	□□□□□ -0.42
FANCA-223	ENST00000567284	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
FANCA-223	ENST00000567284	PHACTR3	Q96KR7	559 aa		12.4	□□□□□ -0.42
FANCA-223	ENST00000567284	PLEKHF1	Q96S99	279 aa		12.4	□□□□□ -0.42
FANCA-223	ENST00000567284	PHF23	Q9BUL5	403 aa	Predicted RBP	12.4	□□□□□ -0.42
FANCA-223	ENST00000567284	SPATA31A1	Q5TZJ5	1347 aa		12.39	□□□□□ -0.43
FANCA-223	ENST00000567284	SPATA31A5	Q5VU36	1347 aa		12.39	□□□□□ -0.43
FANCA-223	ENST00000567284	SPATA31A7	Q8IWB4	1347 aa		12.39	□□□□□ -0.43
FANCA-223	ENST00000567284	MEGF6	O75095	1541 aa		12.39	□□□□□ -0.43
FANCA-223	ENST00000567284		A0A0G2JS52	829 aa		12.39	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms