RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 CABP1Q9NZU7 370 aa7.52□□□□□ -1.21
CDH13-209ENST00000567109 BRMS1Q9HCU9 246 aa7.52□□□□□ -1.21
CDH13-209ENST00000567109 CPLX1O14810 134 aa7.52□□□□□ -1.21
CDH13-209ENST00000567109 SAMD9LQ8IVG5 1584 aa7.52□□□□□ -1.21
CDH13-209ENST00000567109 BRD4O60885 1362 aaPredicted RBP7.51□□□□□ -1.21
CDH13-209ENST00000567109 IBSPP21815 317 aaPredicted RBP7.51□□□□□ -1.21
CDH13-209ENST00000567109 CFAP74Q9C0B2 1584 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 PDIA4P13667 645 aaKnown RBP7.51□□□□□ -1.21
CDH13-209ENST00000567109 FAM161AQ3B820 660 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 TTC21AQ8NDW8 1320 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 HSPA2P54652 639 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 RUFY1Q96T51 708 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 FOXD4L1Q9NU39 408 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 KDM5DQ9BY66 1539 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 PLIN1O60240 522 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 DIAPH3Q9NSV4 1193 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 LMTK2Q8IWU2 1503 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 KIF6Q6ZMV9 814 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 ZFYVE9O95405 1425 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.51□□□□□ -1.21
CDH13-209ENST00000567109 CCDC173Q0VFZ6 552 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 ATP2B2Q01814 1243 aa7.51□□□□□ -1.21
CDH13-209ENST00000567109 WDHD1O75717 1129 aaPredicted RBP7.5□□□□□ -1.21
CDH13-209ENST00000567109 SYCP1Q15431 976 aa7.5□□□□□ -1.21
CDH13-209ENST00000567109 HOMER1Q86YM7 354 aa7.5□□□□□ -1.21
CDH13-209ENST00000567109 NECTIN2Q92692 538 aa7.5□□□□□ -1.21
CDH13-209ENST00000567109 NPHP3Q7Z494 1330 aa7.5□□□□□ -1.21
CDH13-209ENST00000567109 AK9Q5TCS8 1911 aa7.5□□□□□ -1.21
CDH13-209ENST00000567109 MPHOSPH10O00566 681 aaKnown RBP7.5□□□□□ -1.21
CDH13-209ENST00000567109 SAFBQ15424 915 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDH13-209ENST00000567109 ZRSR2Q15696 482 aaKnown RBP7.5□□□□□ -1.21
CDH13-209ENST00000567109 FOXD4L6Q3SYB3 417 aaPredicted RBP7.5□□□□□ -1.21
CDH13-209ENST00000567109 FOXD4L3Q6VB84 417 aaPredicted RBP7.5□□□□□ -1.21
CDH13-209ENST00000567109 RUFY2Q8WXA3 655 aa7.5□□□□□ -1.21
CDH13-209ENST00000567109 DNMT1P26358 1616 aaKnown RBP7.5□□□□□ -1.21
CDH13-209ENST00000567109 TRIM21P19474 475 aaKnown RBP7.5□□□□□ -1.21
CDH13-209ENST00000567109 AK7Q96M32 723 aa7.5□□□□□ -1.21
CDH13-209ENST00000567109 RBM5P52756 815 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDH13-209ENST00000567109 MYO6Q9UM54 1294 aa7.5□□□□□ -1.21
CDH13-209ENST00000567109 ATP6V1DQ9Y5K8 247 aa7.5□□□□□ -1.21
CDH13-209ENST00000567109 PRAG1Q86YV5 1406 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 RAPGEF4Q8WZA2 1011 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 SLKQ9H2G2 1235 aaPredicted RBP7.49□□□□□ -1.21
CDH13-209ENST00000567109 GGNBP2Q9H3C7 697 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 ERVK-7P63135 1459 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 OFD1O75665 1012 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 PIP4K2BP78356 416 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 MATR3P43243 847 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDH13-209ENST00000567109 MRE11P49959 708 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 NCKAP5LQ9HCH0 1330 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 SLC3A2P08195 630 aaKnown RBP7.49□□□□□ -1.21
CDH13-209ENST00000567109 CCDC146Q8IYE0 955 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 CFAP43Q8NDM7 1665 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 XBP1P17861 261 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 A2ML1A8K2U0 1454 aa7.49□□□□□ -1.21
CDH13-209ENST00000567109 RALGAPBQ86X10 1494 aa7.48□□□□□ -1.21
CDH13-209ENST00000567109 IFIT2P09913 472 aaKnown RBP7.48□□□□□ -1.21
CDH13-209ENST00000567109 ITSN2Q9NZM3 1697 aa7.48□□□□□ -1.21
CDH13-209ENST00000567109 CAVIN1Q6NZI2 390 aaKnown RBP7.48□□□□□ -1.21
CDH13-209ENST00000567109 CDK5RAP3Q96JB5 506 aa7.48□□□□□ -1.21
CDH13-209ENST00000567109 CDR1P51861 262 aa7.48□□□□□ -1.21
CDH13-209ENST00000567109 NUTM2BA6NNL0 878 aaPredicted RBP7.48□□□□□ -1.21
CDH13-209ENST00000567109 NUTM2EB1AL46 878 aaPredicted RBP7.48□□□□□ -1.21
CDH13-209ENST00000567109 NUTM2AQ8IVF1 878 aaPredicted RBP7.48□□□□□ -1.21
CDH13-209ENST00000567109 ANO2Q9NQ90 1003 aa7.48□□□□□ -1.21
CDH13-209ENST00000567109 NLRP2Q9NX02 1062 aa7.48□□□□□ -1.21
CDH13-209ENST00000567109 SBNO2Q9Y2G9 1366 aa7.48□□□□□ -1.21
CDH13-209ENST00000567109 MAST1Q9Y2H9 1570 aa7.48□□□□□ -1.21
CDH13-209ENST00000567109 YTHDC2Q9H6S0 1430 aaKnown RBP7.48□□□□□ -1.21
CDH13-209ENST00000567109 MYCNP04198 464 aaPredicted RBP7.48□□□□□ -1.21
CDH13-209ENST00000567109 CTTNBP2Q8WZ74 1663 aa7.48□□□□□ -1.21
CDH13-209ENST00000567109 ANKRD36BQ8N2N9 1353 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 NEBLO76041 1014 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 NEFHP12036 1026 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 CCDC66A2RUB6 948 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 HSP90AB4PQ58FF6 505 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 RIMBP3CA6NJZ7 1639 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 RIMBP3BA6NNM3 1639 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 RIMBP3Q9UFD9 1639 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 TRPM2O94759 1503 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 PLEKHG3A1L390 1219 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 FOSBP53539 338 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 PLEKHO1Q53GL0 409 aaPredicted RBP7.47□□□□□ -1.21
CDH13-209ENST00000567109 RIC3Q7Z5B4 369 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 GAS2L2Q8NHY3 880 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 TSPYL1Q9H0U9 437 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 SMG6Q86US8 1419 aaKnown RBP7.47□□□□□ -1.21
CDH13-209ENST00000567109 PRDM11Q9NQV5 511 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 SPATA31E1Q6ZUB1 1445 aa7.47□□□□□ -1.21
CDH13-209ENST00000567109 G3BP1Q13283 466 aaKnown RBP eCLIP7.46□□□□□ -1.21
CDH13-209ENST00000567109 RNF20Q5VTR2 975 aa7.46□□□□□ -1.21
CDH13-209ENST00000567109 RALYLQ86SE5 291 aaKnown RBP7.46□□□□□ -1.21
CDH13-209ENST00000567109 ABTB2Q8N961 1025 aa7.46□□□□□ -1.21
CDH13-209ENST00000567109 ANKRD45Q5TZF3 282 aa7.46□□□□□ -1.21
CDH13-209ENST00000567109 SLC12A5Q9H2X9 1139 aa7.46□□□□□ -1.21
CDH13-209ENST00000567109 DESP17661 470 aa7.46□□□□□ -1.22
CDH13-209ENST00000567109 WAPLQ7Z5K2 1190 aa7.46□□□□□ -1.22
CDH13-209ENST00000567109 ZNF592Q92610 1267 aa7.46□□□□□ -1.22
CDH13-209ENST00000567109 ABCA9Q8IUA7 1624 aa7.46□□□□□ -1.22
CDH13-209ENST00000567109 MYOM2P54296 1465 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms