RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CRB1P82279 1406 aa14.62□□□□□ -0.07
CAPN3-216ENST00000567071 BCL9O00512 1426 aa14.61□□□□□ -0.07
CAPN3-216ENST00000567071 YBX3P16989 372 aaKnown RBP eCLIP14.61□□□□□ -0.07
CAPN3-216ENST00000567071 DNAJC5GQ8N7S2 189 aa14.61□□□□□ -0.07
CAPN3-216ENST00000567071 NLGN2Q8NFZ4 835 aa14.61□□□□□ -0.07
CAPN3-216ENST00000567071 LMO7Q8WWI1 1683 aa14.61□□□□□ -0.07
CAPN3-216ENST00000567071 PIK3C2GO75747 1445 aa14.6□□□□□ -0.07
CAPN3-216ENST00000567071 RGL3Q3MIN7 710 aa14.6□□□□□ -0.07
CAPN3-216ENST00000567071 NUTM2GQ5VZR2 741 aa14.6□□□□□ -0.07
CAPN3-216ENST00000567071 TULP4Q9NRJ4 1543 aa14.6□□□□□ -0.07
CAPN3-216ENST00000567071 CPDO75976 1380 aa14.6□□□□□ -0.07
CAPN3-216ENST00000567071 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
CAPN3-216ENST00000567071 ADCY9O60503 1353 aa14.59□□□□□ -0.07
CAPN3-216ENST00000567071 COL5A2P05997 1499 aaPredicted RBP14.58□□□□□ -0.08
CAPN3-216ENST00000567071 CDCA7Q9BWT1 371 aaPredicted RBP14.58□□□□□ -0.08
CAPN3-216ENST00000567071 ITSN1Q15811 1721 aa14.58□□□□□ -0.08
CAPN3-216ENST00000567071 MARCH10Q8NA82 808 aaPredicted RBP14.57□□□□□ -0.08
CAPN3-216ENST00000567071 HIRIP3Q9BW71 556 aaPredicted RBP14.57□□□□□ -0.08
CAPN3-216ENST00000567071 KIF3CO14782 793 aa14.55□□□□□ -0.08
CAPN3-216ENST00000567071 TOM1L2Q6ZVM7 507 aa14.55□□□□□ -0.08
CAPN3-216ENST00000567071 WWC3Q9ULE0 1092 aa14.55□□□□□ -0.08
CAPN3-216ENST00000567071 PRR36Q9H6K5 1346 aa14.55□□□□□ -0.08
CAPN3-216ENST00000567071 PAPPAQ13219 1627 aa14.55□□□□□ -0.08
CAPN3-216ENST00000567071 KLRG1Q96E93 195 aa14.54□□□□□ -0.08
CAPN3-216ENST00000567071 C14orf93Q9H972 538 aaKnown RBP14.54□□□□□ -0.08
CAPN3-216ENST00000567071 WDR90Q96KV7 1748 aa14.54□□□□□ -0.08
CAPN3-216ENST00000567071 WNK3Q9BYP7 1800 aa14.54□□□□□ -0.08
CAPN3-216ENST00000567071 COL24A1Q17RW2 1714 aa14.53□□□□□ -0.08
CAPN3-216ENST00000567071 QSER1Q2KHR3 1735 aa14.53□□□□□ -0.08
CAPN3-216ENST00000567071 MINK1Q8N4C8 1332 aaPredicted RBP14.53□□□□□ -0.08
CAPN3-216ENST00000567071 ZBTB7CA1YPR0 619 aa14.53□□□□□ -0.08
CAPN3-216ENST00000567071 TOMM70O94826 608 aa14.53□□□□□ -0.08
CAPN3-216ENST00000567071 ZNF827Q17R98 1081 aa14.53□□□□□ -0.08
CAPN3-216ENST00000567071 JMYQ8N9B5 988 aa14.53□□□□□ -0.08
CAPN3-216ENST00000567071 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
CAPN3-216ENST00000567071 WASLO00401 505 aaPredicted RBP14.52□□□□□ -0.09
CAPN3-216ENST00000567071 ABTB2Q8N961 1025 aa14.52□□□□□ -0.09
CAPN3-216ENST00000567071 EXOC5O00471 708 aa14.51□□□□□ -0.09
CAPN3-216ENST00000567071 NHSQ6T4R5 1651 aa14.51□□□□□ -0.09
CAPN3-216ENST00000567071 KAT6BQ8WYB5 2073 aa14.51□□□□□ -0.09
CAPN3-216ENST00000567071 BRD4O60885 1362 aaPredicted RBP14.5□□□□□ -0.09
CAPN3-216ENST00000567071 GCP02774 474 aa14.5□□□□□ -0.09
CAPN3-216ENST00000567071 NLRP13Q86W25 1043 aa14.5□□□□□ -0.09
CAPN3-216ENST00000567071 USP19O94966 1318 aa14.49□□□□□ -0.09
CAPN3-216ENST00000567071 CFAP70Q5T0N1 1121 aa14.49□□□□□ -0.09
CAPN3-216ENST00000567071 TFCP2L1Q9NZI6 479 aa14.49□□□□□ -0.09
CAPN3-216ENST00000567071 ARHGEF28Q8N1W1 1705 aaKnown RBP14.49□□□□□ -0.09
CAPN3-216ENST00000567071 SPATA31E1Q6ZUB1 1445 aa14.49□□□□□ -0.09
CAPN3-216ENST00000567071 AKT1S1Q96B36 256 aa14.47□□□□□ -0.09
CAPN3-216ENST00000567071 ACSBG1Q96GR2 724 aa14.47□□□□□ -0.09
CAPN3-216ENST00000567071 PNPLA7Q6ZV29 1317 aa14.46□□□□□ -0.09
CAPN3-216ENST00000567071 WDR17Q8IZU2 1322 aa14.46□□□□□ -0.09
CAPN3-216ENST00000567071 C16orf71Q8IYS4 520 aaPredicted RBP14.46□□□□□ -0.09
CAPN3-216ENST00000567071 NUDT16Q96DE0 195 aaKnown RBP14.46□□□□□ -0.09
CAPN3-216ENST00000567071 TRAK1Q9UPV9 953 aa14.46□□□□□ -0.09
CAPN3-216ENST00000567071 BTAF1O14981 1849 aa14.45□□□□□ -0.1
CAPN3-216ENST00000567071 PCNTO95613 3336 aa14.45□□□□□ -0.1
CAPN3-216ENST00000567071 SLC27A3Q5K4L6 730 aa14.45□□□□□ -0.1
CAPN3-216ENST00000567071 CD2APQ9Y5K6 639 aa14.45□□□□□ -0.1
CAPN3-216ENST00000567071 USP6P35125 1406 aa14.44□□□□□ -0.1
CAPN3-216ENST00000567071 CSB-PGBD3P0DP91 1061 aa14.44□□□□□ -0.1
CAPN3-216ENST00000567071 LRRC4BQ9NT99 713 aa14.44□□□□□ -0.1
CAPN3-216ENST00000567071 ACEP12821 1306 aa14.43□□□□□ -0.1
CAPN3-216ENST00000567071 TNS2Q63HR2 1409 aa14.43□□□□□ -0.1
CAPN3-216ENST00000567071 RBM46Q8TBY0 533 aaKnown RBP14.43□□□□□ -0.1
CAPN3-216ENST00000567071 POLR3AO14802 1390 aaPredicted RBP14.43□□□□□ -0.1
CAPN3-216ENST00000567071 CARD10Q9BWT7 1032 aa14.42□□□□□ -0.1
CAPN3-216ENST00000567071 TUBGCP6Q96RT7 1819 aa14.42□□□□□ -0.1
CAPN3-216ENST00000567071 HTRA3P83110 453 aa14.41□□□□□ -0.1
CAPN3-216ENST00000567071 TRPM1Q7Z4N2 1603 aa14.41□□□□□ -0.1
CAPN3-216ENST00000567071 HSPA1AP0DMV8 641 aaKnown RBP14.4□□□□□ -0.1
CAPN3-216ENST00000567071 HSPA1BP0DMV9 641 aaKnown RBP14.4□□□□□ -0.1
CAPN3-216ENST00000567071 FSTL1Q12841 308 aa14.4□□□□□ -0.1
CAPN3-216ENST00000567071 CCDC7Q96M83 1385 aa14.39□□□□□ -0.11
CAPN3-216ENST00000567071 ABCC6O95255 1503 aa14.38□□□□□ -0.11
CAPN3-216ENST00000567071 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
CAPN3-216ENST00000567071 MSL1Q68DK7 614 aa14.37□□□□□ -0.11
CAPN3-216ENST00000567071 IGSF1Q8N6C5 1336 aa14.37□□□□□ -0.11
CAPN3-216ENST00000567071 PIK3C2AO00443 1686 aa14.36□□□□□ -0.11
CAPN3-216ENST00000567071 PLEKHG3A1L390 1219 aa14.36□□□□□ -0.11
CAPN3-216ENST00000567071 NLRP6P59044 892 aa14.36□□□□□ -0.11
CAPN3-216ENST00000567071 COL18A1P39060 1754 aa14.35□□□□□ -0.11
CAPN3-216ENST00000567071 PPIP5K1Q6PFW1 1433 aa14.35□□□□□ -0.11
CAPN3-216ENST00000567071 NMRK2Q9NPI5 230 aa14.35□□□□□ -0.11
CAPN3-216ENST00000567071 ADGRB1O14514 1584 aa14.34□□□□□ -0.11
CAPN3-216ENST00000567071 CDK19Q9BWU1 502 aa14.34□□□□□ -0.11
CAPN3-216ENST00000567071 AXIN2Q9Y2T1 843 aa14.34□□□□□ -0.11
CAPN3-216ENST00000567071 CPSF1Q10570 1443 aaKnown RBP14.33□□□□□ -0.11
CAPN3-216ENST00000567071 RGPD5Q99666 1765 aa14.33□□□□□ -0.12
CAPN3-216ENST00000567071 SLIT3O75094 1523 aa14.33□□□□□ -0.12
CAPN3-216ENST00000567071 COL23A1Q86Y22 540 aaPredicted RBP14.32□□□□□ -0.12
CAPN3-216ENST00000567071 CICQ96RK0 1608 aaPredicted RBP14.31□□□□□ -0.12
CAPN3-216ENST00000567071 HMGB2P26583 209 aaKnown RBP14.31□□□□□ -0.12
CAPN3-216ENST00000567071 FAM161AQ3B820 660 aa14.3□□□□□ -0.12
CAPN3-216ENST00000567071 FLAD1Q8NFF5 587 aa14.3□□□□□ -0.12
CAPN3-216ENST00000567071 IL2RBP14784 551 aa14.29□□□□□ -0.12
CAPN3-216ENST00000567071 KCNQ4P56696 695 aa14.29□□□□□ -0.12
CAPN3-216ENST00000567071 KCNH5Q8NCM2 988 aa14.29□□□□□ -0.12
CAPN3-216ENST00000567071 SYTL4Q96C24 671 aaPredicted RBP14.29□□□□□ -0.12
CAPN3-216ENST00000567071 CCNL1Q9UK58 526 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms