RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 STRN4Q9NRL3 753 aa35.8■■■■□ 3.32
NME3-209ENST00000566600 CDK12Q9NYV4 1490 aaPredicted RBP35.8■■■■□ 3.32
NME3-209ENST00000566600 ANKRD26Q9UPS8 1709 aa35.78■■■■□ 3.32
NME3-209ENST00000566600 COL5A2P05997 1499 aaPredicted RBP35.77■■■■□ 3.32
NME3-209ENST00000566600 PER1O15534 1290 aaPredicted RBP35.75■■■■□ 3.31
NME3-209ENST00000566600 AXIN2Q9Y2T1 843 aa35.75■■■■□ 3.31
NME3-209ENST00000566600 SPATA31A5Q5VU36 1347 aa35.74■■■■□ 3.31
NME3-209ENST00000566600 SPATA31A7Q8IWB4 1347 aa35.74■■■■□ 3.31
NME3-209ENST00000566600 MAP3K19Q56UN5 1328 aa35.73■■■■□ 3.31
NME3-209ENST00000566600 GLI3P10071 1580 aa35.72■■■■□ 3.31
NME3-209ENST00000566600 AMPHP49418 695 aa35.71■■■■□ 3.31
NME3-209ENST00000566600 AMER1Q5JTC6 1135 aaPredicted RBP35.71■■■■□ 3.31
NME3-209ENST00000566600 IP6K1Q92551 441 aa35.71■■■■□ 3.31
NME3-209ENST00000566600 RTL1A6NKG5 1358 aa35.7■■■■□ 3.31
NME3-209ENST00000566600 FBLN1P23142 703 aa35.7■■■■□ 3.31
NME3-209ENST00000566600 BLMP54132 1417 aaPredicted RBP35.7■■■■□ 3.31
NME3-209ENST00000566600 LARP1Q6PKG0 1096 aaKnown RBP35.7■■■■□ 3.31
NME3-209ENST00000566600 RGPD5Q99666 1765 aa35.69■■■■□ 3.3
NME3-209ENST00000566600 SPATA31A1Q5TZJ5 1347 aa35.69■■■■□ 3.3
NME3-209ENST00000566600 KIF24Q5T7B8 1368 aa35.68■■■■□ 3.3
NME3-209ENST00000566600 WDR17Q8IZU2 1322 aa35.68■■■■□ 3.3
NME3-209ENST00000566600 RRS1Q15050 365 aaKnown RBP35.68■■■■□ 3.3
NME3-209ENST00000566600 MORC1Q86VD1 984 aa35.68■■■■□ 3.3
NME3-209ENST00000566600 CRB1P82279 1406 aa35.67■■■■□ 3.3
NME3-209ENST00000566600 NPC1L1Q9UHC9 1359 aa35.66■■■■□ 3.3
NME3-209ENST00000566600 CSB-PGBD3P0DP91 1061 aa35.66■■■■□ 3.3
NME3-209ENST00000566600 RGS12O14924 1447 aa35.66■■■■□ 3.3
NME3-209ENST00000566600 HOXC9P31274 260 aa35.65■■■■□ 3.3
NME3-209ENST00000566600 TOM1L2Q6ZVM7 507 aa35.65■■■■□ 3.3
NME3-209ENST00000566600 ONECUT3O60422 494 aaPredicted RBP35.64■■■■□ 3.3
NME3-209ENST00000566600 ERBB3P21860 1342 aa35.62■■■■□ 3.29
NME3-209ENST00000566600 THRAP3Q9Y2W1 955 aaKnown RBP35.62■■■■□ 3.29
NME3-209ENST00000566600 TNNT2P45379 298 aaPredicted RBP35.61■■■■□ 3.29
NME3-209ENST00000566600 TCP11L2Q8N4U5 519 aa35.61■■■■□ 3.29
NME3-209ENST00000566600 ANKRD24Q8TF21 1146 aa35.61■■■■□ 3.29
NME3-209ENST00000566600 USP35Q9P2H5 1018 aa35.61■■■■□ 3.29
NME3-209ENST00000566600 FLT4P35916 1363 aa35.61■■■■□ 3.29
NME3-209ENST00000566600 FAM98CQ17RN3 349 aaKnown RBP35.6■■■■□ 3.29
NME3-209ENST00000566600 BARGINQ6ZT62 677 aa35.59■■■■□ 3.29
NME3-209ENST00000566600 MAP2P11137 1827 aaKnown RBP35.59■■■■□ 3.29
NME3-209ENST00000566600 CC2D1BQ5T0F9 858 aaKnown RBP35.58■■■■□ 3.29
NME3-209ENST00000566600 CARD10Q9BWT7 1032 aa35.58■■■■□ 3.29
NME3-209ENST00000566600 EMILIN1Q9Y6C2 1016 aa35.58■■■■□ 3.29
NME3-209ENST00000566600 SEPT12Q8IYM1 358 aa35.57■■■■□ 3.28
NME3-209ENST00000566600 POLKQ9UBT6 870 aa35.57■■■■□ 3.28
NME3-209ENST00000566600 INSRP06213 1382 aa35.56■■■■□ 3.28
NME3-209ENST00000566600 PEAK1Q9H792 1746 aa35.55■■■■□ 3.28
NME3-209ENST00000566600 A0A0G2JS52 829 aa35.55■■■■□ 3.28
NME3-209ENST00000566600 PPM1GO15355 546 aaPredicted RBP35.55■■■■□ 3.28
NME3-209ENST00000566600 MYT1Q01538 1121 aa35.55■■■■□ 3.28
NME3-209ENST00000566600 FAM208AQ9UK61 1670 aaKnown RBP35.54■■■■□ 3.28
NME3-209ENST00000566600 NLRP2Q9NX02 1062 aa35.54■■■■□ 3.28
NME3-209ENST00000566600 SMG6Q86US8 1419 aaKnown RBP35.54■■■■□ 3.28
NME3-209ENST00000566600 LTV1Q96GA3 475 aaPredicted RBP35.53■■■■□ 3.28
NME3-209ENST00000566600 HSP90AB2PQ58FF8 381 aa35.52■■■■□ 3.28
NME3-209ENST00000566600 THSD7AQ9UPZ6 1657 aa35.51■■■■□ 3.28
NME3-209ENST00000566600 DDX10Q13206 875 aaKnown RBP35.5■■■■□ 3.27
NME3-209ENST00000566600 CDCA7Q9BWT1 371 aaPredicted RBP35.49■■■■□ 3.27
NME3-209ENST00000566600 ZNF316A6NFI3 1004 aaPredicted RBP35.48■■■■□ 3.27
NME3-209ENST00000566600 CNGB1Q14028 1251 aaPredicted RBP35.45■■■■□ 3.27
NME3-209ENST00000566600 SOCS7O14512 581 aa35.44■■■■□ 3.26
NME3-209ENST00000566600 KRT27Q7Z3Y8 459 aa35.43■■■■□ 3.26
NME3-209ENST00000566600 BRWD3Q6RI45 1802 aa35.43■■■■□ 3.26
NME3-209ENST00000566600 WNK3Q9BYP7 1800 aa35.41■■■■□ 3.26
NME3-209ENST00000566600 PARP4Q9UKK3 1724 aaKnown RBP35.4■■■■□ 3.26
NME3-209ENST00000566600 DISP2A7MBM2 1401 aa35.38■■■■□ 3.25
NME3-209ENST00000566600 IL2RBP14784 551 aa35.37■■■■□ 3.25
NME3-209ENST00000566600 PDE3BQ13370 1112 aa35.37■■■■□ 3.25
NME3-209ENST00000566600 NBPF6Q5VWK0 638 aa35.37■■■■□ 3.25
NME3-209ENST00000566600 NBPF4Q96M43 638 aa35.37■■■■□ 3.25
NME3-209ENST00000566600 MTHFSP49914 203 aa35.36■■■■□ 3.25
NME3-209ENST00000566600 RGPD2P0DJD1 1756 aa35.36■■■■□ 3.25
NME3-209ENST00000566600 DDB1Q16531 1140 aa35.35■■■■□ 3.25
NME3-209ENST00000566600 EIF4A2Q14240 407 aaKnown RBP35.33■■■■□ 3.25
NME3-209ENST00000566600 LRRC37A3O60309 1634 aa35.31■■■■□ 3.24
NME3-209ENST00000566600 EXOC5O00471 708 aa35.3■■■■□ 3.24
NME3-209ENST00000566600 USHBP1Q8N6Y0 703 aa35.28■■■■□ 3.24
NME3-209ENST00000566600 PARD3Q8TEW0 1356 aa35.27■■■■□ 3.24
NME3-209ENST00000566600 RAPGEF4Q8WZA2 1011 aa35.27■■■■□ 3.24
NME3-209ENST00000566600 EYA1Q99502 592 aa35.27■■■■□ 3.24
NME3-209ENST00000566600 PPP2R1AP30153 589 aa35.26■■■■□ 3.24
NME3-209ENST00000566600 NCAPD2Q15021 1401 aa35.25■■■■□ 3.23
NME3-209ENST00000566600 TNS2Q63HR2 1409 aa35.25■■■■□ 3.23
NME3-209ENST00000566600 RALBP1Q15311 655 aa35.25■■■■□ 3.23
NME3-209ENST00000566600 FAM196AQ6ZSG2 479 aa35.23■■■■□ 3.23
NME3-209ENST00000566600 CFAP53Q96M91 514 aa35.23■■■■□ 3.23
NME3-209ENST00000566600 TATP17735 454 aaPredicted RBP35.22■■■■□ 3.23
NME3-209ENST00000566600 UPF1Q92900 1129 aaKnown RBP eCLIP35.22■■■■□ 3.23
NME3-209ENST00000566600 IGSF1Q8N6C5 1336 aa35.22■■■■□ 3.23
NME3-209ENST00000566600 DIAPH1O60610 1272 aaKnown RBP35.21■■■■□ 3.23
NME3-209ENST00000566600 IL13P35225 146 aa35.21■■■■□ 3.23
NME3-209ENST00000566600 FAM182BQ5T319 152 aa35.2■■■■□ 3.23
NME3-209ENST00000566600 MEGF6O75095 1541 aa35.2■■■■□ 3.23
NME3-209ENST00000566600 OVOS2A0A0G2JMS6 1433 aa35.19■■■■□ 3.22
NME3-209ENST00000566600 CCDC125Q86Z20 511 aa35.19■■■■□ 3.22
NME3-209ENST00000566600 MARCH10Q8NA82 808 aaPredicted RBP35.17■■■■□ 3.22
NME3-209ENST00000566600 ZCRB1Q8TBF4 217 aaKnown RBP35.17■■■■□ 3.22
NME3-209ENST00000566600 EP400Q96L91 3159 aa35.15■■■■□ 3.22
NME3-209ENST00000566600 COL3A1P02461 1466 aaPredicted RBP35.15■■■■□ 3.22
NME3-209ENST00000566600 PLEKHG2Q9H7P9 1386 aa35.14■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms