RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 FYB1O15117 783 aa17.85■□□□□ 0.45
CNEP1R1-208ENST00000566482 AXIN2Q9Y2T1 843 aa17.85■□□□□ 0.45
CNEP1R1-208ENST00000566482 KIF20BQ96Q89 1820 aa17.84■□□□□ 0.45
CNEP1R1-208ENST00000566482 ABCC6O95255 1503 aa17.84■□□□□ 0.45
CNEP1R1-208ENST00000566482 GGNBP2Q9H3C7 697 aa17.84■□□□□ 0.45
CNEP1R1-208ENST00000566482 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
CNEP1R1-208ENST00000566482 A0A0G2JS52 829 aa17.83■□□□□ 0.44
CNEP1R1-208ENST00000566482 MYT1Q01538 1121 aa17.83■□□□□ 0.44
CNEP1R1-208ENST00000566482 LTN1O94822 1766 aa17.83■□□□□ 0.44
CNEP1R1-208ENST00000566482 RGPD5Q99666 1765 aa17.83■□□□□ 0.44
CNEP1R1-208ENST00000566482 UPF1Q92900 1129 aaKnown RBP eCLIP17.82■□□□□ 0.44
CNEP1R1-208ENST00000566482 USP35Q9P2H5 1018 aa17.82■□□□□ 0.44
CNEP1R1-208ENST00000566482 THSD7AQ9UPZ6 1657 aa17.82■□□□□ 0.44
CNEP1R1-208ENST00000566482 CRB1P82279 1406 aa17.81■□□□□ 0.44
CNEP1R1-208ENST00000566482 KIF7Q2M1P5 1343 aa17.81■□□□□ 0.44
CNEP1R1-208ENST00000566482 WDR17Q8IZU2 1322 aa17.8■□□□□ 0.44
CNEP1R1-208ENST00000566482 TCP11L2Q8N4U5 519 aa17.8■□□□□ 0.44
CNEP1R1-208ENST00000566482 FBLN1P23142 703 aa17.79■□□□□ 0.44
CNEP1R1-208ENST00000566482 BARGINQ6ZT62 677 aa17.79■□□□□ 0.44
CNEP1R1-208ENST00000566482 PANK3Q9H999 370 aa17.79■□□□□ 0.44
CNEP1R1-208ENST00000566482 CGNL1Q0VF96 1302 aa17.78■□□□□ 0.44
CNEP1R1-208ENST00000566482 TOM1L2Q6ZVM7 507 aa17.78■□□□□ 0.44
CNEP1R1-208ENST00000566482 KRT27Q7Z3Y8 459 aa17.78■□□□□ 0.44
CNEP1R1-208ENST00000566482 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.44
CNEP1R1-208ENST00000566482 CSB-PGBD3P0DP91 1061 aa17.77■□□□□ 0.44
CNEP1R1-208ENST00000566482 THRAP3Q9Y2W1 955 aaKnown RBP17.77■□□□□ 0.44
CNEP1R1-208ENST00000566482 IP6K1Q92551 441 aa17.76■□□□□ 0.43
CNEP1R1-208ENST00000566482 ERBB3P21860 1342 aa17.75■□□□□ 0.43
CNEP1R1-208ENST00000566482 BLMP54132 1417 aaPredicted RBP17.75■□□□□ 0.43
CNEP1R1-208ENST00000566482 RRS1Q15050 365 aaKnown RBP17.75■□□□□ 0.43
CNEP1R1-208ENST00000566482 EP400Q96L91 3159 aa17.75■□□□□ 0.43
CNEP1R1-208ENST00000566482 AMPHP49418 695 aa17.74■□□□□ 0.43
CNEP1R1-208ENST00000566482 ANKRD24Q8TF21 1146 aa17.74■□□□□ 0.43
CNEP1R1-208ENST00000566482 CARD10Q9BWT7 1032 aa17.74■□□□□ 0.43
CNEP1R1-208ENST00000566482 CCDC7Q96M83 1385 aa17.74■□□□□ 0.43
CNEP1R1-208ENST00000566482 HOXC9P31274 260 aa17.73■□□□□ 0.43
CNEP1R1-208ENST00000566482 RTL1A6NKG5 1358 aa17.73■□□□□ 0.43
CNEP1R1-208ENST00000566482 ANKRD26Q9UPS8 1709 aa17.72■□□□□ 0.43
CNEP1R1-208ENST00000566482 WNK3Q9BYP7 1800 aa17.72■□□□□ 0.43
CNEP1R1-208ENST00000566482 PARP4Q9UKK3 1724 aaKnown RBP17.72■□□□□ 0.43
CNEP1R1-208ENST00000566482 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
CNEP1R1-208ENST00000566482 FAM182BQ5T319 152 aa17.71■□□□□ 0.43
CNEP1R1-208ENST00000566482 LTV1Q96GA3 475 aaPredicted RBP17.71■□□□□ 0.43
CNEP1R1-208ENST00000566482 NLRP2Q9NX02 1062 aa17.71■□□□□ 0.43
CNEP1R1-208ENST00000566482 PEAK1Q9H792 1746 aa17.7■□□□□ 0.42
CNEP1R1-208ENST00000566482 DISP2A7MBM2 1401 aa17.7■□□□□ 0.42
CNEP1R1-208ENST00000566482 LRRC37A3O60309 1634 aa17.69■□□□□ 0.42
CNEP1R1-208ENST00000566482 NSD2O96028 1365 aa17.69■□□□□ 0.42
CNEP1R1-208ENST00000566482 KNSTRNQ9Y448 316 aa17.69■□□□□ 0.42
CNEP1R1-208ENST00000566482 FAM208AQ9UK61 1670 aaKnown RBP17.68■□□□□ 0.42
CNEP1R1-208ENST00000566482 PDE3BQ13370 1112 aa17.68■□□□□ 0.42
CNEP1R1-208ENST00000566482 EMILIN1Q9Y6C2 1016 aa17.68■□□□□ 0.42
CNEP1R1-208ENST00000566482 FLT4P35916 1363 aa17.67■□□□□ 0.42
CNEP1R1-208ENST00000566482 KIF24Q5T7B8 1368 aa17.67■□□□□ 0.42
CNEP1R1-208ENST00000566482 CCDC125Q86Z20 511 aa17.67■□□□□ 0.42
CNEP1R1-208ENST00000566482 CDCA7Q9BWT1 371 aaPredicted RBP17.67■□□□□ 0.42
CNEP1R1-208ENST00000566482 TNNT2P45379 298 aaPredicted RBP17.66■□□□□ 0.42
CNEP1R1-208ENST00000566482 INSRP06213 1382 aa17.66■□□□□ 0.42
CNEP1R1-208ENST00000566482 DDB1Q16531 1140 aa17.65■□□□□ 0.42
CNEP1R1-208ENST00000566482 HSP90AB2PQ58FF8 381 aa17.65■□□□□ 0.42
CNEP1R1-208ENST00000566482 AMER1Q5JTC6 1135 aaPredicted RBP17.65■□□□□ 0.42
CNEP1R1-208ENST00000566482 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.42
CNEP1R1-208ENST00000566482 RGPD2P0DJD1 1756 aa17.64■□□□□ 0.41
CNEP1R1-208ENST00000566482 MAP2P11137 1827 aaKnown RBP17.64■□□□□ 0.41
CNEP1R1-208ENST00000566482 PPM1GO15355 546 aaPredicted RBP17.64■□□□□ 0.41
CNEP1R1-208ENST00000566482 FAM196AQ6ZSG2 479 aa17.64■□□□□ 0.41
CNEP1R1-208ENST00000566482 MORC1Q86VD1 984 aa17.64■□□□□ 0.41
CNEP1R1-208ENST00000566482 POLKQ9UBT6 870 aa17.64■□□□□ 0.41
CNEP1R1-208ENST00000566482 PER1O15534 1290 aaPredicted RBP17.63■□□□□ 0.41
CNEP1R1-208ENST00000566482 IL2RBP14784 551 aa17.63■□□□□ 0.41
CNEP1R1-208ENST00000566482 TNS2Q63HR2 1409 aa17.63■□□□□ 0.41
CNEP1R1-208ENST00000566482 SF3B2Q13435 895 aaKnown RBP17.62■□□□□ 0.41
CNEP1R1-208ENST00000566482 EXOC5O00471 708 aa17.61■□□□□ 0.41
CNEP1R1-208ENST00000566482 NBPF6Q5VWK0 638 aa17.61■□□□□ 0.41
CNEP1R1-208ENST00000566482 NBPF4Q96M43 638 aa17.61■□□□□ 0.41
CNEP1R1-208ENST00000566482 OVOS2A0A0G2JMS6 1433 aa17.61■□□□□ 0.41
CNEP1R1-208ENST00000566482 RGPD1P0DJD0 1748 aa17.61■□□□□ 0.41
CNEP1R1-208ENST00000566482 USHBP1Q8N6Y0 703 aa17.6■□□□□ 0.41
CNEP1R1-208ENST00000566482 MARCH10Q8NA82 808 aaPredicted RBP17.6■□□□□ 0.41
CNEP1R1-208ENST00000566482 TNS1Q9HBL0 1735 aaKnown RBP17.59■□□□□ 0.41
CNEP1R1-208ENST00000566482 TRIM37O94972 964 aa17.59■□□□□ 0.41
CNEP1R1-208ENST00000566482 DEFB132Q7Z7B7 95 aa17.59■□□□□ 0.41
CNEP1R1-208ENST00000566482 MEGF6O75095 1541 aa17.57■□□□□ 0.4
CNEP1R1-208ENST00000566482 CC2D1BQ5T0F9 858 aaKnown RBP17.57■□□□□ 0.4
CNEP1R1-208ENST00000566482 NPC1L1Q9UHC9 1359 aa17.56■□□□□ 0.4
CNEP1R1-208ENST00000566482 BAG6P46379 1132 aa17.56■□□□□ 0.4
CNEP1R1-208ENST00000566482 ZEB1P37275 1124 aaPredicted RBP17.55■□□□□ 0.4
CNEP1R1-208ENST00000566482 BCL9O00512 1426 aa17.55■□□□□ 0.4
CNEP1R1-208ENST00000566482 CNGB1Q14028 1251 aaPredicted RBP17.54■□□□□ 0.4
CNEP1R1-208ENST00000566482 EIF4A2Q14240 407 aaKnown RBP17.54■□□□□ 0.4
CNEP1R1-208ENST00000566482 RAPGEF4Q8WZA2 1011 aa17.54■□□□□ 0.4
CNEP1R1-208ENST00000566482 NCAPD2Q15021 1401 aa17.54■□□□□ 0.4
CNEP1R1-208ENST00000566482 SBF2Q86WG5 1849 aa17.54■□□□□ 0.4
CNEP1R1-208ENST00000566482 EYA1Q99502 592 aa17.53■□□□□ 0.4
CNEP1R1-208ENST00000566482 APBA3O96018 575 aa17.52■□□□□ 0.4
CNEP1R1-208ENST00000566482 EN1Q05925 392 aaPredicted RBP17.52■□□□□ 0.4
CNEP1R1-208ENST00000566482 ZCRB1Q8TBF4 217 aaKnown RBP17.52■□□□□ 0.4
CNEP1R1-208ENST00000566482 TATP17735 454 aaPredicted RBP17.51■□□□□ 0.39
CNEP1R1-208ENST00000566482 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
CNEP1R1-208ENST00000566482 SHANK3Q9BYB0 1731 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms