RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.73□□□□□ -1.01
PALB2-204ENST00000566069 ERFEQ4G0M1 354 aa8.73□□□□□ -1.01
PALB2-204ENST00000566069 Q6ZVU0 165 aa8.73□□□□□ -1.01
PALB2-204ENST00000566069 ADAMTS8Q9UP79 889 aa8.73□□□□□ -1.01
PALB2-204ENST00000566069 PDE4DQ08499 809 aa8.72□□□□□ -1.01
PALB2-204ENST00000566069 PPP1R26Q5T8A7 1209 aaPredicted RBP8.72□□□□□ -1.01
PALB2-204ENST00000566069 NBPF14Q5TI25 921 aa8.72□□□□□ -1.01
PALB2-204ENST00000566069 NANOS1Q8WY41 292 aaKnown RBP8.72□□□□□ -1.01
PALB2-204ENST00000566069 SPINT1O43278 529 aa8.71□□□□□ -1.02
PALB2-204ENST00000566069 CTDSPL2Q05D32 466 aa8.71□□□□□ -1.02
PALB2-204ENST00000566069 RNFT1Q5M7Z0 435 aa8.71□□□□□ -1.02
PALB2-204ENST00000566069 CARD14Q9BXL6 1004 aa8.71□□□□□ -1.02
PALB2-204ENST00000566069 SLC35F4A4IF30 521 aa8.7□□□□□ -1.02
PALB2-204ENST00000566069 RASSF7Q02833 373 aa8.7□□□□□ -1.02
PALB2-204ENST00000566069 CCDC155Q8N6L0 562 aa8.7□□□□□ -1.02
PALB2-204ENST00000566069 COL25A1Q9BXS0 654 aaPredicted RBP8.7□□□□□ -1.02
PALB2-204ENST00000566069 HELBQ8NG08 1087 aaPredicted RBP8.69□□□□□ -1.02
PALB2-204ENST00000566069 GPKOWQ92917 476 aaPredicted RBP eCLIP8.69□□□□□ -1.02
PALB2-204ENST00000566069 FBXO31Q5XUX0 539 aaPredicted RBP8.68□□□□□ -1.02
PALB2-204ENST00000566069 ZNF385CQ66K41 422 aaPredicted RBP8.68□□□□□ -1.02
PALB2-204ENST00000566069 TMEM151AQ8N4L1 468 aa8.68□□□□□ -1.02
PALB2-204ENST00000566069 WHAMMQ8TF30 809 aa8.68□□□□□ -1.02
PALB2-204ENST00000566069 GDF11O95390 407 aa8.67□□□□□ -1.02
PALB2-204ENST00000566069 CLK2P49760 499 aaKnown RBP8.67□□□□□ -1.02
PALB2-204ENST00000566069 PDXDC2PQ6P474 469 aa8.67□□□□□ -1.02
PALB2-204ENST00000566069 KCTD15Q96SI1 283 aaPredicted RBP8.67□□□□□ -1.02
PALB2-204ENST00000566069 OCSTAMPQ9BR26 566 aa8.67□□□□□ -1.02
PALB2-204ENST00000566069 POLR3EQ9NVU0 708 aa8.67□□□□□ -1.02
PALB2-204ENST00000566069 CTSOP43234 321 aaPredicted RBP8.66□□□□□ -1.02
PALB2-204ENST00000566069 VWA5B2Q8N398 1253 aa8.66□□□□□ -1.02
PALB2-204ENST00000566069 LRRN4Q8WUT4 740 aa8.66□□□□□ -1.02
PALB2-204ENST00000566069 AGBL1Q96MI9 1066 aa8.66□□□□□ -1.02
PALB2-204ENST00000566069 SLURP2P0DP57 97 aa8.65□□□□□ -1.02
PALB2-204ENST00000566069 PGPEP1Q9NXJ5 209 aa8.65□□□□□ -1.02
PALB2-204ENST00000566069 ARHGEF15O94989 841 aa8.64□□□□□ -1.03
PALB2-204ENST00000566069 ITGA6P23229 1130 aa8.64□□□□□ -1.03
PALB2-204ENST00000566069 ARHGAP9Q9BRR9 750 aa8.64□□□□□ -1.03
PALB2-204ENST00000566069 SLC24A3Q9HC58 644 aa8.64□□□□□ -1.03
PALB2-204ENST00000566069 FKBPLQ9UIM3 349 aa8.64□□□□□ -1.03
PALB2-204ENST00000566069 SENP3-EIF4A1A0A087X0R7 540 aa8.63□□□□□ -1.03
PALB2-204ENST00000566069 INTS6LQ5JSJ4 861 aaKnown RBP8.63□□□□□ -1.03
PALB2-204ENST00000566069 INSM2Q96T92 566 aaPredicted RBP8.63□□□□□ -1.03
PALB2-204ENST00000566069 RELBQ01201 579 aa8.62□□□□□ -1.03
PALB2-204ENST00000566069 NR6A1Q15406 480 aa8.61□□□□□ -1.03
PALB2-204ENST00000566069 ADD1P35611 737 aaKnown RBP8.6□□□□□ -1.03
PALB2-204ENST00000566069 ZBTB33Q86T24 672 aa8.6□□□□□ -1.03
PALB2-204ENST00000566069 SVOPQ8N4V2 548 aa8.6□□□□□ -1.03
PALB2-204ENST00000566069 KDF1Q8NAX2 398 aaPredicted RBP8.6□□□□□ -1.03
PALB2-204ENST00000566069 SLC10A4Q96EP9 437 aa8.6□□□□□ -1.03
PALB2-204ENST00000566069 RSPH6AQ9H0K4 717 aa8.6□□□□□ -1.03
PALB2-204ENST00000566069 TMPRSS4Q9NRS4 437 aa8.6□□□□□ -1.03
PALB2-204ENST00000566069 CDV3Q9UKY7 258 aaKnown RBP8.6□□□□□ -1.03
PALB2-204ENST00000566069 DHX9Q08211 1270 aaKnown RBP8.59□□□□□ -1.03
PALB2-204ENST00000566069 SV2AQ7L0J3 742 aa8.59□□□□□ -1.03
PALB2-204ENST00000566069 RNF217Q8TC41 542 aa8.59□□□□□ -1.03
PALB2-204ENST00000566069 ZNF395Q9H8N7 513 aaPredicted RBP8.59□□□□□ -1.03
PALB2-204ENST00000566069 CDC14CA4D256 554 aa8.58□□□□□ -1.04
PALB2-204ENST00000566069 PROCA1Q8NCQ7 364 aaPredicted RBP8.58□□□□□ -1.04
PALB2-204ENST00000566069 RNF225M0QZC1 329 aaPredicted RBP8.57□□□□□ -1.04
PALB2-204ENST00000566069 LILRA1O75019 489 aa8.57□□□□□ -1.04
PALB2-204ENST00000566069 IRS1P35568 1242 aa8.57□□□□□ -1.04
PALB2-204ENST00000566069 ADAM32Q8TC27 787 aa8.57□□□□□ -1.04
PALB2-204ENST00000566069 EPS8L1Q8TE68 723 aa8.57□□□□□ -1.04
PALB2-204ENST00000566069 CUEDC1Q9NWM3 386 aaPredicted RBP8.57□□□□□ -1.04
PALB2-204ENST00000566069 FOXD4L5Q5VV16 416 aaPredicted RBP8.56□□□□□ -1.04
PALB2-204ENST00000566069 LYPD4Q6UWN0 246 aa8.56□□□□□ -1.04
PALB2-204ENST00000566069 ZNF784Q8NCA9 323 aaPredicted RBP8.56□□□□□ -1.04
PALB2-204ENST00000566069 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.56□□□□□ -1.04
PALB2-204ENST00000566069 POLMQ9NP87 494 aaPredicted RBP8.56□□□□□ -1.04
PALB2-204ENST00000566069 ZC3H4Q9UPT8 1303 aaKnown RBP8.55□□□□□ -1.04
PALB2-204ENST00000566069 SKIV2LQ15477 1246 aaKnown RBP8.55□□□□□ -1.04
PALB2-204ENST00000566069 PPP2R2DQ66LE6 453 aa8.55□□□□□ -1.04
PALB2-204ENST00000566069 ADAMTS2O95450 1211 aa8.54□□□□□ -1.04
PALB2-204ENST00000566069 PTK2Q05397 1052 aa8.54□□□□□ -1.04
PALB2-204ENST00000566069 GAS6Q14393 721 aa8.54□□□□□ -1.04
PALB2-204ENST00000566069 GPSM3Q9Y4H4 160 aa8.54□□□□□ -1.04
PALB2-204ENST00000566069 ERVH48-1M5A8F1 160 aa8.53□□□□□ -1.04
PALB2-204ENST00000566069 ADH1AP07327 375 aa8.53□□□□□ -1.04
PALB2-204ENST00000566069 PTGIRP43119 386 aa8.53□□□□□ -1.04
PALB2-204ENST00000566069 DNMT3AQ9Y6K1 912 aaPredicted RBP8.53□□□□□ -1.04
PALB2-204ENST00000566069 GPAT2Q6NUI2 795 aa8.52□□□□□ -1.05
PALB2-204ENST00000566069 HMX1Q9NP08 348 aaPredicted RBP8.52□□□□□ -1.05
PALB2-204ENST00000566069 ESPNB1AK53 854 aa8.51□□□□□ -1.05
PALB2-204ENST00000566069 CELA2BP08218 269 aaPredicted RBP8.51□□□□□ -1.05
PALB2-204ENST00000566069 MARSP56192 900 aaKnown RBP8.51□□□□□ -1.05
PALB2-204ENST00000566069 RAB15P59190 212 aa8.51□□□□□ -1.05
PALB2-204ENST00000566069 SRSF11Q05519 484 aaKnown RBP8.51□□□□□ -1.05
PALB2-204ENST00000566069 AP1G2O75843 785 aa8.49□□□□□ -1.05
PALB2-204ENST00000566069 SH3D19Q5HYK7 790 aa8.49□□□□□ -1.05
PALB2-204ENST00000566069 KANK3Q6NY19 840 aa8.49□□□□□ -1.05
PALB2-204ENST00000566069 LYSMD3Q7Z3D4 306 aa8.49□□□□□ -1.05
PALB2-204ENST00000566069 IGHA1P01876 353 aa8.48□□□□□ -1.05
PALB2-204ENST00000566069 NBPF20Q3BBV1 942 aa8.48□□□□□ -1.05
PALB2-204ENST00000566069 PRICKLE2Q7Z3G6 844 aa8.48□□□□□ -1.05
PALB2-204ENST00000566069 SCARF2Q96GP6 870 aaPredicted RBP8.48□□□□□ -1.05
PALB2-204ENST00000566069 FAM117AQ9C073 453 aa8.48□□□□□ -1.05
PALB2-204ENST00000566069 RNF144AP50876 292 aaPredicted RBP8.47□□□□□ -1.05
PALB2-204ENST00000566069 RHOQP17081 205 aa8.46□□□□□ -1.06
PALB2-204ENST00000566069 DZIP3Q86Y13 1208 aaKnown RBP8.46□□□□□ -1.06
PALB2-204ENST00000566069 GPBP1L1Q9HC44 474 aaPredicted RBP8.46□□□□□ -1.06
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