RNA–Protein interactions for RNA: ENST00000565993.1

AC055855.2-201, humanhuman

TSL 2 BASIC

Gene AC055855.2, Length 500 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.2-201ENST00000565993 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
AC055855.2-201ENST00000565993 RB1CC1Q8TDY2 1594 aa9.63□□□□□ -0.87
AC055855.2-201ENST00000565993 NANOS1Q8WY41 292 aaKnown RBP9.63□□□□□ -0.87
AC055855.2-201ENST00000565993 MAGEB6P1A0A0J9YX57 407 aa9.62□□□□□ -0.87
AC055855.2-201ENST00000565993 KRT76Q01546 638 aa9.62□□□□□ -0.87
AC055855.2-201ENST00000565993 PTSQ03393 145 aa9.62□□□□□ -0.87
AC055855.2-201ENST00000565993 PGPEP1Q9NXJ5 209 aa9.62□□□□□ -0.87
AC055855.2-201ENST00000565993 SUZ12Q15022 739 aaKnown RBP9.61□□□□□ -0.87
AC055855.2-201ENST00000565993 Q6ZVU0 165 aa9.61□□□□□ -0.87
AC055855.2-201ENST00000565993 TMEM151AQ8N4L1 468 aa9.61□□□□□ -0.87
AC055855.2-201ENST00000565993 SCRIBQ14160 1630 aa9.6□□□□□ -0.87
AC055855.2-201ENST00000565993 ERFEQ4G0M1 354 aa9.6□□□□□ -0.87
AC055855.2-201ENST00000565993 KCTD17Q8N5Z5 321 aa9.6□□□□□ -0.87
AC055855.2-201ENST00000565993 GPR161Q8N6U8 529 aaKnown RBP9.6□□□□□ -0.87
AC055855.2-201ENST00000565993 CNTNAP3BQ96NU0 1288 aa9.6□□□□□ -0.87
AC055855.2-201ENST00000565993 CNTNAP3Q9BZ76 1288 aa9.6□□□□□ -0.87
AC055855.2-201ENST00000565993 CDV3Q9UKY7 258 aaKnown RBP9.6□□□□□ -0.87
AC055855.2-201ENST00000565993 SPINT1O43278 529 aa9.59□□□□□ -0.87
AC055855.2-201ENST00000565993 PPP1R26Q5T8A7 1209 aaPredicted RBP9.59□□□□□ -0.87
AC055855.2-201ENST00000565993 GDF11O95390 407 aa9.58□□□□□ -0.88
AC055855.2-201ENST00000565993 RASSF7Q02833 373 aa9.58□□□□□ -0.88
AC055855.2-201ENST00000565993 CARD14Q9BXL6 1004 aa9.58□□□□□ -0.88
AC055855.2-201ENST00000565993 ADAMTS8Q9UP79 889 aa9.58□□□□□ -0.88
AC055855.2-201ENST00000565993 DHX9Q08211 1270 aaKnown RBP9.57□□□□□ -0.88
AC055855.2-201ENST00000565993 CCDC155Q8N6L0 562 aa9.57□□□□□ -0.88
AC055855.2-201ENST00000565993 COL25A1Q9BXS0 654 aaPredicted RBP9.57□□□□□ -0.88
AC055855.2-201ENST00000565993 CLK2P49760 499 aaKnown RBP9.56□□□□□ -0.88
AC055855.2-201ENST00000565993 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
AC055855.2-201ENST00000565993 PDXDC2PQ6P474 469 aa9.56□□□□□ -0.88
AC055855.2-201ENST00000565993 PDE4DQ08499 809 aa9.55□□□□□ -0.88
AC055855.2-201ENST00000565993 SLC10A4Q96EP9 437 aa9.55□□□□□ -0.88
AC055855.2-201ENST00000565993 SLC35F4A4IF30 521 aa9.54□□□□□ -0.88
AC055855.2-201ENST00000565993 FIGNL2A6NMB9 653 aa9.54□□□□□ -0.88
AC055855.2-201ENST00000565993 CBLBQ13191 982 aa9.54□□□□□ -0.88
AC055855.2-201ENST00000565993 ZNF385CQ66K41 422 aaPredicted RBP9.54□□□□□ -0.88
AC055855.2-201ENST00000565993 ARHGAP9Q9BRR9 750 aa9.54□□□□□ -0.88
AC055855.2-201ENST00000565993 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
AC055855.2-201ENST00000565993 ZC3H4Q9UPT8 1303 aaKnown RBP9.54□□□□□ -0.88
AC055855.2-201ENST00000565993 SLURP2P0DP57 97 aa9.53□□□□□ -0.88
AC055855.2-201ENST00000565993 SVOPQ8N4V2 548 aa9.53□□□□□ -0.88
AC055855.2-201ENST00000565993 KCTD15Q96SI1 283 aaPredicted RBP9.53□□□□□ -0.88
AC055855.2-201ENST00000565993 ITGA6P23229 1130 aa9.52□□□□□ -0.89
AC055855.2-201ENST00000565993 FKBPLQ9UIM3 349 aa9.52□□□□□ -0.89
AC055855.2-201ENST00000565993 RNFT1Q5M7Z0 435 aa9.51□□□□□ -0.89
AC055855.2-201ENST00000565993 SV2AQ7L0J3 742 aa9.51□□□□□ -0.89
AC055855.2-201ENST00000565993 ZBTB33Q86T24 672 aa9.5□□□□□ -0.89
AC055855.2-201ENST00000565993 CTDSPL2Q05D32 466 aa9.49□□□□□ -0.89
AC055855.2-201ENST00000565993 DNMT3AQ9Y6K1 912 aaPredicted RBP9.49□□□□□ -0.89
AC055855.2-201ENST00000565993 ARHGEF15O94989 841 aa9.48□□□□□ -0.89
AC055855.2-201ENST00000565993 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
AC055855.2-201ENST00000565993 INTS6LQ5JSJ4 861 aaKnown RBP9.48□□□□□ -0.89
AC055855.2-201ENST00000565993 GPSM3Q9Y4H4 160 aa9.48□□□□□ -0.89
AC055855.2-201ENST00000565993 CDC14CA4D256 554 aa9.47□□□□□ -0.89
AC055855.2-201ENST00000565993 IGHA1P01876 353 aa9.47□□□□□ -0.89
AC055855.2-201ENST00000565993 KANK3Q6NY19 840 aa9.47□□□□□ -0.89
AC055855.2-201ENST00000565993 VWA5B2Q8N398 1253 aa9.47□□□□□ -0.89
AC055855.2-201ENST00000565993 RELBQ01201 579 aa9.46□□□□□ -0.9
AC055855.2-201ENST00000565993 PTK2Q05397 1052 aa9.46□□□□□ -0.9
AC055855.2-201ENST00000565993 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.9
AC055855.2-201ENST00000565993 RNF217Q8TC41 542 aa9.46□□□□□ -0.9
AC055855.2-201ENST00000565993 INSM2Q96T92 566 aaPredicted RBP9.46□□□□□ -0.9
AC055855.2-201ENST00000565993 POLMQ9NP87 494 aaPredicted RBP9.46□□□□□ -0.9
AC055855.2-201ENST00000565993 FOXK2Q01167 660 aa9.45□□□□□ -0.9
AC055855.2-201ENST00000565993 WHAMMQ8TF30 809 aa9.45□□□□□ -0.9
AC055855.2-201ENST00000565993 SCARF2Q96GP6 870 aaPredicted RBP9.45□□□□□ -0.9
AC055855.2-201ENST00000565993 AGBL1Q96MI9 1066 aa9.45□□□□□ -0.9
AC055855.2-201ENST00000565993 POLR3EQ9NVU0 708 aa9.45□□□□□ -0.9
AC055855.2-201ENST00000565993 UNC13AQ9UPW8 1703 aa9.45□□□□□ -0.9
AC055855.2-201ENST00000565993 SUPT5HO00267 1087 aaKnown RBP9.44□□□□□ -0.9
AC055855.2-201ENST00000565993 MARSP56192 900 aaKnown RBP9.44□□□□□ -0.9
AC055855.2-201ENST00000565993 SENP3-EIF4A1A0A087X0R7 540 aa9.43□□□□□ -0.9
AC055855.2-201ENST00000565993 IRS1P35568 1242 aa9.43□□□□□ -0.9
AC055855.2-201ENST00000565993 LRRN4Q8WUT4 740 aa9.43□□□□□ -0.9
AC055855.2-201ENST00000565993 ADH1AP07327 375 aa9.42□□□□□ -0.9
AC055855.2-201ENST00000565993 SRSF11Q05519 484 aaKnown RBP9.42□□□□□ -0.9
AC055855.2-201ENST00000565993 NR6A1Q15406 480 aa9.42□□□□□ -0.9
AC055855.2-201ENST00000565993 PNMA1Q8ND90 353 aa9.42□□□□□ -0.9
AC055855.2-201ENST00000565993 OCSTAMPQ9BR26 566 aa9.42□□□□□ -0.9
AC055855.2-201ENST00000565993 ADAMTS2O95450 1211 aa9.41□□□□□ -0.9
AC055855.2-201ENST00000565993 ADAM32Q8TC27 787 aa9.41□□□□□ -0.9
AC055855.2-201ENST00000565993 TRIM52Q96A61 297 aa9.41□□□□□ -0.9
AC055855.2-201ENST00000565993 MAP3K10Q02779 954 aa9.4□□□□□ -0.9
AC055855.2-201ENST00000565993 GPAT2Q6NUI2 795 aa9.4□□□□□ -0.9
AC055855.2-201ENST00000565993 ZNF784Q8NCA9 323 aaPredicted RBP9.4□□□□□ -0.9
AC055855.2-201ENST00000565993 ZNF395Q9H8N7 513 aaPredicted RBP9.4□□□□□ -0.9
AC055855.2-201ENST00000565993 SKIV2LQ15477 1246 aaKnown RBP9.39□□□□□ -0.91
AC055855.2-201ENST00000565993 FOXD4L5Q5VV16 416 aaPredicted RBP9.39□□□□□ -0.91
AC055855.2-201ENST00000565993 PPP2R2DQ66LE6 453 aa9.39□□□□□ -0.91
AC055855.2-201ENST00000565993 SLC24A3Q9HC58 644 aa9.39□□□□□ -0.91
AC055855.2-201ENST00000565993 PTGIRP43119 386 aa9.38□□□□□ -0.91
AC055855.2-201ENST00000565993 LYSMD3Q7Z3D4 306 aa9.38□□□□□ -0.91
AC055855.2-201ENST00000565993 TMPRSS4Q9NRS4 437 aa9.38□□□□□ -0.91
AC055855.2-201ENST00000565993 SH3D19Q5HYK7 790 aa9.37□□□□□ -0.91
AC055855.2-201ENST00000565993 LYPD4Q6UWN0 246 aa9.37□□□□□ -0.91
AC055855.2-201ENST00000565993 GMCL1Q96IK5 515 aa9.37□□□□□ -0.91
AC055855.2-201ENST00000565993 ENAMQ9NRM1 1142 aa9.37□□□□□ -0.91
AC055855.2-201ENST00000565993 LILRA1O75019 489 aa9.36□□□□□ -0.91
AC055855.2-201ENST00000565993 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.36□□□□□ -0.91
AC055855.2-201ENST00000565993 ESPNB1AK53 854 aa9.35□□□□□ -0.91
AC055855.2-201ENST00000565993 ERVH48-1M5A8F1 160 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms