RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 EIF4A2Q14240 407 aaKnown RBP24.88■■□□□ 1.57
COMMD4-213ENST00000565834 ZBTB7CA1YPR0 619 aa24.87■■□□□ 1.57
COMMD4-213ENST00000565834 ARHGEF25Q86VW2 580 aa24.87■■□□□ 1.57
COMMD4-213ENST00000565834 CABLES1Q8TDN4 633 aa24.87■■□□□ 1.57
COMMD4-213ENST00000565834 ABCA3Q99758 1704 aa24.87■■□□□ 1.57
COMMD4-213ENST00000565834 IP6K1Q92551 441 aa24.85■■□□□ 1.57
COMMD4-213ENST00000565834 LRRC59Q96AG4 307 aaKnown RBP24.85■■□□□ 1.57
COMMD4-213ENST00000565834 SENP3-EIF4A1A0A087X0R7 540 aa24.85■■□□□ 1.57
COMMD4-213ENST00000565834 RGPD1P0DJD0 1748 aa24.85■■□□□ 1.57
COMMD4-213ENST00000565834 RUNDC1Q96C34 613 aa24.85■■□□□ 1.57
COMMD4-213ENST00000565834 COL16A1Q07092 1604 aaPredicted RBP24.83■■□□□ 1.57
COMMD4-213ENST00000565834 ZC3H6P61129 1189 aaKnown RBP24.83■■□□□ 1.57
COMMD4-213ENST00000565834 PNNQ9H307 717 aaKnown RBP24.82■■□□□ 1.56
COMMD4-213ENST00000565834 FCHSD2O94868 740 aa24.81■■□□□ 1.56
COMMD4-213ENST00000565834 APAF1O14727 1248 aa24.8■■□□□ 1.56
COMMD4-213ENST00000565834 HAP1P54257 671 aaPredicted RBP24.8■■□□□ 1.56
COMMD4-213ENST00000565834 COL22A1Q8NFW1 1626 aaPredicted RBP24.8■■□□□ 1.56
COMMD4-213ENST00000565834 RGPD5Q99666 1765 aa24.8■■□□□ 1.56
COMMD4-213ENST00000565834 CPDO75976 1380 aa24.8■■□□□ 1.56
COMMD4-213ENST00000565834 ABCC6O95255 1503 aa24.79■■□□□ 1.56
COMMD4-213ENST00000565834 HMOX1P09601 288 aa24.79■■□□□ 1.56
COMMD4-213ENST00000565834 RSPH6AQ9H0K4 717 aa24.79■■□□□ 1.56
COMMD4-213ENST00000565834 SALL2Q9Y467 1007 aaPredicted RBP24.79■■□□□ 1.56
COMMD4-213ENST00000565834 COL18A1P39060 1754 aa24.78■■□□□ 1.56
COMMD4-213ENST00000565834 LTV1Q96GA3 475 aaPredicted RBP24.78■■□□□ 1.56
COMMD4-213ENST00000565834 PLEKHF1Q96S99 279 aa24.78■■□□□ 1.56
COMMD4-213ENST00000565834 MAPK8IP3Q9UPT6 1336 aa24.77■■□□□ 1.56
COMMD4-213ENST00000565834 KIAA0232Q92628 1395 aa24.77■■□□□ 1.56
COMMD4-213ENST00000565834 PRKAR2BP31323 418 aa24.76■■□□□ 1.55
COMMD4-213ENST00000565834 TCP11L2Q8N4U5 519 aa24.75■■□□□ 1.55
COMMD4-213ENST00000565834 NGEFQ8N5V2 710 aa24.75■■□□□ 1.55
COMMD4-213ENST00000565834 IGSF1Q8N6C5 1336 aa24.75■■□□□ 1.55
COMMD4-213ENST00000565834 NEFMP07197 916 aa24.75■■□□□ 1.55
COMMD4-213ENST00000565834 SULT6B1Q6IMI4 303 aa24.75■■□□□ 1.55
COMMD4-213ENST00000565834 EYA1Q99502 592 aa24.75■■□□□ 1.55
COMMD4-213ENST00000565834 RGPD2P0DJD1 1756 aa24.73■■□□□ 1.55
COMMD4-213ENST00000565834 AEBP1Q8IUX7 1158 aa24.72■■□□□ 1.55
COMMD4-213ENST00000565834 AXIN2Q9Y2T1 843 aa24.72■■□□□ 1.55
COMMD4-213ENST00000565834 CHRNA2Q15822 529 aa24.72■■□□□ 1.55
COMMD4-213ENST00000565834 ANKRD24Q8TF21 1146 aa24.72■■□□□ 1.55
COMMD4-213ENST00000565834 PRDM11Q9NQV5 511 aa24.72■■□□□ 1.55
COMMD4-213ENST00000565834 KDRP35968 1356 aa24.71■■□□□ 1.55
COMMD4-213ENST00000565834 RRP7AQ9Y3A4 280 aaKnown RBP24.69■■□□□ 1.54
COMMD4-213ENST00000565834 LMO7Q8WWI1 1683 aa24.69■■□□□ 1.54
COMMD4-213ENST00000565834 FAM208AQ9UK61 1670 aaKnown RBP24.69■■□□□ 1.54
COMMD4-213ENST00000565834 NEUROD2Q15784 382 aa24.69■■□□□ 1.54
COMMD4-213ENST00000565834 ERBB3P21860 1342 aa24.68■■□□□ 1.54
COMMD4-213ENST00000565834 CAMTA1Q9Y6Y1 1673 aa24.67■■□□□ 1.54
COMMD4-213ENST00000565834 TMPOP42166 694 aaKnown RBP24.67■■□□□ 1.54
COMMD4-213ENST00000565834 PDE3BQ13370 1112 aa24.67■■□□□ 1.54
COMMD4-213ENST00000565834 NCBP3Q53F19 620 aaKnown RBP24.67■■□□□ 1.54
COMMD4-213ENST00000565834 NBPF6Q5VWK0 638 aa24.66■■□□□ 1.54
COMMD4-213ENST00000565834 PHACTR3Q96KR7 559 aa24.66■■□□□ 1.54
COMMD4-213ENST00000565834 NBPF4Q96M43 638 aa24.66■■□□□ 1.54
COMMD4-213ENST00000565834 ZNF521Q96K83 1311 aa24.66■■□□□ 1.54
COMMD4-213ENST00000565834 CCDC27Q2M243 656 aa24.64■■□□□ 1.53
COMMD4-213ENST00000565834 USHBP1Q8N6Y0 703 aa24.64■■□□□ 1.53
COMMD4-213ENST00000565834 DLG5Q8TDM6 1919 aa24.64■■□□□ 1.53
COMMD4-213ENST00000565834 NFE2L2Q16236 605 aa24.63■■□□□ 1.53
COMMD4-213ENST00000565834 COL14A1Q05707 1796 aaKnown RBP24.63■■□□□ 1.53
COMMD4-213ENST00000565834 NCAPD2Q15021 1401 aa24.63■■□□□ 1.53
COMMD4-213ENST00000565834 WWC1Q8IX03 1113 aa24.62■■□□□ 1.53
COMMD4-213ENST00000565834 PHF23Q9BUL5 403 aaPredicted RBP24.62■■□□□ 1.53
COMMD4-213ENST00000565834 CSB-PGBD3P0DP91 1061 aa24.62■■□□□ 1.53
COMMD4-213ENST00000565834 RIPK4P57078 832 aa24.62■■□□□ 1.53
COMMD4-213ENST00000565834 JCADQ9P266 1359 aa24.61■■□□□ 1.53
COMMD4-213ENST00000565834 COL5A2P05997 1499 aaPredicted RBP24.6■■□□□ 1.53
COMMD4-213ENST00000565834 FAM83GA6ND36 823 aa24.6■■□□□ 1.53
COMMD4-213ENST00000565834 GOLGA2Q08379 1002 aa24.6■■□□□ 1.53
COMMD4-213ENST00000565834 NLRP2Q9NX02 1062 aa24.59■■□□□ 1.53
COMMD4-213ENST00000565834 CDCA7LQ96GN5 454 aa24.59■■□□□ 1.53
COMMD4-213ENST00000565834 TRIM35Q9UPQ4 493 aa24.57■■□□□ 1.52
COMMD4-213ENST00000565834 WDR17Q8IZU2 1322 aa24.57■■□□□ 1.52
COMMD4-213ENST00000565834 WDR63Q8IWG1 891 aa24.56■■□□□ 1.52
COMMD4-213ENST00000565834 NUTM2BA6NNL0 878 aaPredicted RBP24.56■■□□□ 1.52
COMMD4-213ENST00000565834 NUTM2EB1AL46 878 aaPredicted RBP24.56■■□□□ 1.52
COMMD4-213ENST00000565834 NUTM2AQ8IVF1 878 aaPredicted RBP24.56■■□□□ 1.52
COMMD4-213ENST00000565834 FBXO41Q8TF61 875 aa24.56■■□□□ 1.52
COMMD4-213ENST00000565834 LMOD3Q0VAK6 560 aa24.55■■□□□ 1.52
COMMD4-213ENST00000565834 PLCH1Q4KWH8 1693 aa24.54■■□□□ 1.52
COMMD4-213ENST00000565834 ADAMTS2O95450 1211 aa24.54■■□□□ 1.52
COMMD4-213ENST00000565834 GAS2L2Q8NHY3 880 aa24.54■■□□□ 1.52
COMMD4-213ENST00000565834 HSPA1LP34931 641 aa24.53■■□□□ 1.52
COMMD4-213ENST00000565834 EVA1CP58658 441 aa24.53■■□□□ 1.52
COMMD4-213ENST00000565834 MTHFSDQ2M296 383 aaKnown RBP24.53■■□□□ 1.52
COMMD4-213ENST00000565834 BTG4Q9NY30 223 aa24.53■■□□□ 1.52
COMMD4-213ENST00000565834 E9PSI1 815 aa24.52■■□□□ 1.52
COMMD4-213ENST00000565834 SLFN5Q08AF3 891 aa24.52■■□□□ 1.52
COMMD4-213ENST00000565834 TOM1L2Q6ZVM7 507 aa24.52■■□□□ 1.52
COMMD4-213ENST00000565834 STRN4Q9NRL3 753 aa24.52■■□□□ 1.52
COMMD4-213ENST00000565834 RAPGEF4Q8WZA2 1011 aa24.5■■□□□ 1.51
COMMD4-213ENST00000565834 SPINK5Q9NQ38 1064 aaPredicted RBP24.5■■□□□ 1.51
COMMD4-213ENST00000565834 SPATA31A6Q5VVP1 1343 aa24.49■■□□□ 1.51
COMMD4-213ENST00000565834 PLEKHO1Q53GL0 409 aaPredicted RBP24.48■■□□□ 1.51
COMMD4-213ENST00000565834 DUSP27Q5VZP5 1158 aa24.48■■□□□ 1.51
COMMD4-213ENST00000565834 LARP1Q6PKG0 1096 aaKnown RBP24.48■■□□□ 1.51
COMMD4-213ENST00000565834 IL16Q14005 1332 aa24.48■■□□□ 1.51
COMMD4-213ENST00000565834 NWD2Q9ULI1 1742 aa24.47■■□□□ 1.51
COMMD4-213ENST00000565834 CALD1Q05682 793 aaKnown RBP24.47■■□□□ 1.51
COMMD4-213ENST00000565834 AMOTQ4VCS5 1084 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 333.5 ms