RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 CCDC155Q8N6L0 562 aa10□□□□□ -0.81
CHD9-215ENST00000565442 NUTM2BA6NNL0 878 aaPredicted RBP9.99□□□□□ -0.81
CHD9-215ENST00000565442 NUTM2EB1AL46 878 aaPredicted RBP9.99□□□□□ -0.81
CHD9-215ENST00000565442 QPCTQ16769 361 aa9.99□□□□□ -0.81
CHD9-215ENST00000565442 RNFT1Q5M7Z0 435 aa9.99□□□□□ -0.81
CHD9-215ENST00000565442 NUTM2DQ5VT03 806 aaPredicted RBP9.99□□□□□ -0.81
CHD9-215ENST00000565442 NUTM2AQ8IVF1 878 aaPredicted RBP9.99□□□□□ -0.81
CHD9-215ENST00000565442 SPINT1O43278 529 aa9.98□□□□□ -0.81
CHD9-215ENST00000565442 Q6ZVU0 165 aa9.98□□□□□ -0.81
CHD9-215ENST00000565442 ZC3H15Q8WU90 426 aaKnown RBP9.98□□□□□ -0.81
CHD9-215ENST00000565442 CARD14Q9BXL6 1004 aa9.98□□□□□ -0.81
CHD9-215ENST00000565442 PGPEP1Q9NXJ5 209 aa9.98□□□□□ -0.81
CHD9-215ENST00000565442 LIMD1Q9UGP4 676 aa9.98□□□□□ -0.81
CHD9-215ENST00000565442 CBLBQ13191 982 aa9.97□□□□□ -0.81
CHD9-215ENST00000565442 PPP1R26Q5T8A7 1209 aaPredicted RBP9.97□□□□□ -0.81
CHD9-215ENST00000565442 HELBQ8NG08 1087 aaPredicted RBP9.97□□□□□ -0.81
CHD9-215ENST00000565442 SLC35F4A4IF30 521 aa9.96□□□□□ -0.82
CHD9-215ENST00000565442 LILRB3O75022 631 aa9.96□□□□□ -0.82
CHD9-215ENST00000565442 TUSC1Q2TAM9 212 aa9.96□□□□□ -0.82
CHD9-215ENST00000565442 ERFEQ4G0M1 354 aa9.96□□□□□ -0.82
CHD9-215ENST00000565442 DNMT3AQ9Y6K1 912 aaPredicted RBP9.96□□□□□ -0.82
CHD9-215ENST00000565442 TRIM66O15016 1216 aa9.95□□□□□ -0.82
CHD9-215ENST00000565442 SLURP2P0DP57 97 aa9.95□□□□□ -0.82
CHD9-215ENST00000565442 ITGA6P23229 1130 aa9.95□□□□□ -0.82
CHD9-215ENST00000565442 MYSM1Q5VVJ2 828 aa9.95□□□□□ -0.82
CHD9-215ENST00000565442 WHAMMQ8TF30 809 aa9.95□□□□□ -0.82
CHD9-215ENST00000565442 GPKOWQ92917 476 aaPredicted RBP eCLIP9.95□□□□□ -0.82
CHD9-215ENST00000565442 IRS1P35568 1242 aa9.94□□□□□ -0.82
CHD9-215ENST00000565442 CDC14CA4D256 554 aa9.93□□□□□ -0.82
CHD9-215ENST00000565442 ARHGEF15O94989 841 aa9.93□□□□□ -0.82
CHD9-215ENST00000565442 GPAT2Q6NUI2 795 aa9.93□□□□□ -0.82
CHD9-215ENST00000565442 VWA5B2Q8N398 1253 aa9.93□□□□□ -0.82
CHD9-215ENST00000565442 SV2AQ7L0J3 742 aa9.92□□□□□ -0.82
CHD9-215ENST00000565442 IGHA1P01876 353 aa9.91□□□□□ -0.82
CHD9-215ENST00000565442 CTSOP43234 321 aaPredicted RBP9.9□□□□□ -0.82
CHD9-215ENST00000565442 MARSP56192 900 aaKnown RBP9.9□□□□□ -0.82
CHD9-215ENST00000565442 RTL5Q5HYW3 569 aaPredicted RBP9.9□□□□□ -0.82
CHD9-215ENST00000565442 KANK3Q6NY19 840 aa9.9□□□□□ -0.82
CHD9-215ENST00000565442 KCTD15Q96SI1 283 aaPredicted RBP9.9□□□□□ -0.82
CHD9-215ENST00000565442 CDV3Q9UKY7 258 aaKnown RBP9.9□□□□□ -0.82
CHD9-215ENST00000565442 DHX9Q08211 1270 aaKnown RBP9.89□□□□□ -0.83
CHD9-215ENST00000565442 SLC10A4Q96EP9 437 aa9.89□□□□□ -0.83
CHD9-215ENST00000565442 AGBL1Q96MI9 1066 aa9.89□□□□□ -0.83
CHD9-215ENST00000565442 ARHGAP9Q9BRR9 750 aa9.89□□□□□ -0.83
CHD9-215ENST00000565442 FOXK2Q01167 660 aa9.88□□□□□ -0.83
CHD9-215ENST00000565442 AK7Q96M32 723 aa9.88□□□□□ -0.83
CHD9-215ENST00000565442 INSM2Q96T92 566 aaPredicted RBP9.88□□□□□ -0.83
CHD9-215ENST00000565442 RELBQ01201 579 aa9.87□□□□□ -0.83
CHD9-215ENST00000565442 PDXDC2PQ6P474 469 aa9.87□□□□□ -0.83
CHD9-215ENST00000565442 SCARF2Q96GP6 870 aaPredicted RBP9.87□□□□□ -0.83
CHD9-215ENST00000565442 RNF217Q8TC41 542 aa9.86□□□□□ -0.83
CHD9-215ENST00000565442 POLMQ9NP87 494 aaPredicted RBP9.86□□□□□ -0.83
CHD9-215ENST00000565442 SENP3-EIF4A1A0A087X0R7 540 aa9.85□□□□□ -0.83
CHD9-215ENST00000565442 ADAMTS2O95450 1211 aa9.85□□□□□ -0.83
CHD9-215ENST00000565442 CLK2P49760 499 aaKnown RBP9.85□□□□□ -0.83
CHD9-215ENST00000565442 INTS6LQ5JSJ4 861 aaKnown RBP9.85□□□□□ -0.83
CHD9-215ENST00000565442 ZBTB33Q86T24 672 aa9.84□□□□□ -0.83
CHD9-215ENST00000565442 FKBPLQ9UIM3 349 aa9.84□□□□□ -0.83
CHD9-215ENST00000565442 SRSF11Q05519 484 aaKnown RBP9.83□□□□□ -0.84
CHD9-215ENST00000565442 LYPD4Q6UWN0 246 aa9.83□□□□□ -0.84
CHD9-215ENST00000565442 MAP3K10Q02779 954 aa9.82□□□□□ -0.84
CHD9-215ENST00000565442 CTDSPL2Q05D32 466 aa9.82□□□□□ -0.84
CHD9-215ENST00000565442 ZNF395Q9H8N7 513 aaPredicted RBP9.82□□□□□ -0.84
CHD9-215ENST00000565442 PDE4DQ08499 809 aa9.81□□□□□ -0.84
CHD9-215ENST00000565442 ZC3H4Q9UPT8 1303 aaKnown RBP9.81□□□□□ -0.84
CHD9-215ENST00000565442 CELA2BP08218 269 aaPredicted RBP9.79□□□□□ -0.84
CHD9-215ENST00000565442 GAS6Q14393 721 aa9.79□□□□□ -0.84
CHD9-215ENST00000565442 FOXD4L5Q5VV16 416 aaPredicted RBP9.79□□□□□ -0.84
CHD9-215ENST00000565442 ADH1AP07327 375 aa9.78□□□□□ -0.84
CHD9-215ENST00000565442 ZNF784Q8NCA9 323 aaPredicted RBP9.78□□□□□ -0.84
CHD9-215ENST00000565442 LRRN4Q8WUT4 740 aa9.78□□□□□ -0.84
CHD9-215ENST00000565442 OCSTAMPQ9BR26 566 aa9.78□□□□□ -0.84
CHD9-215ENST00000565442 TMPRSS4Q9NRS4 437 aa9.78□□□□□ -0.84
CHD9-215ENST00000565442 POLR3EQ9NVU0 708 aa9.78□□□□□ -0.84
CHD9-215ENST00000565442 PTK2Q05397 1052 aa9.77□□□□□ -0.85
CHD9-215ENST00000565442 NBPF20Q3BBV1 942 aa9.77□□□□□ -0.85
CHD9-215ENST00000565442 RSPH6AQ9H0K4 717 aa9.77□□□□□ -0.85
CHD9-215ENST00000565442 CUEDC1Q9NWM3 386 aaPredicted RBP9.77□□□□□ -0.85
CHD9-215ENST00000565442 NR6A1Q15406 480 aa9.76□□□□□ -0.85
CHD9-215ENST00000565442 ENAMQ9NRM1 1142 aa9.76□□□□□ -0.85
CHD9-215ENST00000565442 PTGIRP43119 386 aa9.75□□□□□ -0.85
CHD9-215ENST00000565442 LYSMD3Q7Z3D4 306 aa9.75□□□□□ -0.85
CHD9-215ENST00000565442 ADAM32Q8TC27 787 aa9.75□□□□□ -0.85
CHD9-215ENST00000565442 GPSM3Q9Y4H4 160 aa9.75□□□□□ -0.85
CHD9-215ENST00000565442 RAB15P59190 212 aa9.74□□□□□ -0.85
CHD9-215ENST00000565442 KDF1Q8NAX2 398 aaPredicted RBP9.74□□□□□ -0.85
CHD9-215ENST00000565442 MSTNO14793 375 aa9.73□□□□□ -0.85
CHD9-215ENST00000565442 LILRA1O75019 489 aa9.73□□□□□ -0.85
CHD9-215ENST00000565442 PLA2G4EQ3MJ16 856 aa9.73□□□□□ -0.85
CHD9-215ENST00000565442 MBIPQ9NS73 344 aa9.73□□□□□ -0.85
CHD9-215ENST00000565442 PHF20L1A8MW92 1017 aa9.72□□□□□ -0.85
CHD9-215ENST00000565442 ADD1P35611 737 aaKnown RBP9.72□□□□□ -0.85
CHD9-215ENST00000565442 ERVH48-1M5A8F1 160 aa9.71□□□□□ -0.86
CHD9-215ENST00000565442 ADAM23O75077 832 aa9.71□□□□□ -0.86
CHD9-215ENST00000565442 XP32Q5T750 250 aa9.71□□□□□ -0.86
CHD9-215ENST00000565442 ZNF837Q96EG3 531 aaPredicted RBP9.71□□□□□ -0.86
CHD9-215ENST00000565442 DCAF5Q96JK2 942 aa9.71□□□□□ -0.86
CHD9-215ENST00000565442 SLC24A3Q9HC58 644 aa9.71□□□□□ -0.86
CHD9-215ENST00000565442 GMCL1Q96IK5 515 aa9.7□□□□□ -0.86
CHD9-215ENST00000565442 SPOCK3Q9BQ16 436 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms