RNA–Protein interactions for RNA: ENST00000565309.1

TRAPPC2L-210, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 699 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-210ENST00000565309 LTN1O94822 1766 aa17.95■□□□□ 0.46
TRAPPC2L-210ENST00000565309 PER1O15534 1290 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC2L-210ENST00000565309 MAP3K19Q56UN5 1328 aa17.95■□□□□ 0.46
TRAPPC2L-210ENST00000565309 RRS1Q15050 365 aaKnown RBP17.94■□□□□ 0.46
TRAPPC2L-210ENST00000565309 COL5A2P05997 1499 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC2L-210ENST00000565309 NSD2O96028 1365 aa17.93■□□□□ 0.46
TRAPPC2L-210ENST00000565309 AMER1Q5JTC6 1135 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC2L-210ENST00000565309 LARP1Q6PKG0 1096 aaKnown RBP17.93■□□□□ 0.46
TRAPPC2L-210ENST00000565309 RGPD5Q99666 1765 aa17.93■□□□□ 0.46
TRAPPC2L-210ENST00000565309 SPATA31A5Q5VU36 1347 aa17.93■□□□□ 0.46
TRAPPC2L-210ENST00000565309 SPATA31A7Q8IWB4 1347 aa17.93■□□□□ 0.46
TRAPPC2L-210ENST00000565309 ANKRD26Q9UPS8 1709 aa17.92■□□□□ 0.46
TRAPPC2L-210ENST00000565309 GLI3P10071 1580 aa17.92■□□□□ 0.46
TRAPPC2L-210ENST00000565309 TNNT2P45379 298 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC2L-210ENST00000565309 AMPHP49418 695 aa17.92■□□□□ 0.46
TRAPPC2L-210ENST00000565309 IP6K1Q92551 441 aa17.92■□□□□ 0.46
TRAPPC2L-210ENST00000565309 ABCC6O95255 1503 aa17.92■□□□□ 0.46
TRAPPC2L-210ENST00000565309 MORC1Q86VD1 984 aa17.91■□□□□ 0.46
TRAPPC2L-210ENST00000565309 SPATA31A1Q5TZJ5 1347 aa17.91■□□□□ 0.46
TRAPPC2L-210ENST00000565309 CDK12Q9NYV4 1490 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC2L-210ENST00000565309 CSB-PGBD3P0DP91 1061 aa17.9■□□□□ 0.46
TRAPPC2L-210ENST00000565309 HOXC9P31274 260 aa17.9■□□□□ 0.46
TRAPPC2L-210ENST00000565309 USP35Q9P2H5 1018 aa17.9■□□□□ 0.46
TRAPPC2L-210ENST00000565309 FAM98CQ17RN3 349 aaKnown RBP17.89■□□□□ 0.45
TRAPPC2L-210ENST00000565309 CC2D1BQ5T0F9 858 aaKnown RBP17.89■□□□□ 0.45
TRAPPC2L-210ENST00000565309 TOM1L2Q6ZVM7 507 aa17.89■□□□□ 0.45
TRAPPC2L-210ENST00000565309 WDR17Q8IZU2 1322 aa17.89■□□□□ 0.45
TRAPPC2L-210ENST00000565309 RGS12O14924 1447 aa17.89■□□□□ 0.45
TRAPPC2L-210ENST00000565309 PPM1GO15355 546 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC2L-210ENST00000565309 CNGB1Q14028 1251 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC2L-210ENST00000565309 EMILIN1Q9Y6C2 1016 aa17.88■□□□□ 0.45
TRAPPC2L-210ENST00000565309 BLMP54132 1417 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC2L-210ENST00000565309 CRB1P82279 1406 aa17.88■□□□□ 0.45
TRAPPC2L-210ENST00000565309 ANKRD24Q8TF21 1146 aa17.87■□□□□ 0.45
TRAPPC2L-210ENST00000565309 POLKQ9UBT6 870 aa17.87■□□□□ 0.45
TRAPPC2L-210ENST00000565309 ERBB3P21860 1342 aa17.87■□□□□ 0.45
TRAPPC2L-210ENST00000565309 RTL1A6NKG5 1358 aa17.87■□□□□ 0.45
TRAPPC2L-210ENST00000565309 A0A0G2JS52 829 aa17.86■□□□□ 0.45
TRAPPC2L-210ENST00000565309 ONECUT3O60422 494 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC2L-210ENST00000565309 MYT1Q01538 1121 aa17.86■□□□□ 0.45
TRAPPC2L-210ENST00000565309 DDX10Q13206 875 aaKnown RBP17.86■□□□□ 0.45
TRAPPC2L-210ENST00000565309 TCP11L2Q8N4U5 519 aa17.86■□□□□ 0.45
TRAPPC2L-210ENST00000565309 LTV1Q96GA3 475 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC2L-210ENST00000565309 NPC1L1Q9UHC9 1359 aa17.86■□□□□ 0.45
TRAPPC2L-210ENST00000565309 MAP2P11137 1827 aaKnown RBP17.86■□□□□ 0.45
TRAPPC2L-210ENST00000565309 FLT4P35916 1363 aa17.85■□□□□ 0.45
TRAPPC2L-210ENST00000565309 HSP90AB2PQ58FF8 381 aa17.85■□□□□ 0.45
TRAPPC2L-210ENST00000565309 KIF24Q5T7B8 1368 aa17.85■□□□□ 0.45
TRAPPC2L-210ENST00000565309 SEPT12Q8IYM1 358 aa17.85■□□□□ 0.45
TRAPPC2L-210ENST00000565309 PEAK1Q9H792 1746 aa17.85■□□□□ 0.45
TRAPPC2L-210ENST00000565309 CARD10Q9BWT7 1032 aa17.84■□□□□ 0.45
TRAPPC2L-210ENST00000565309 NLRP2Q9NX02 1062 aa17.84■□□□□ 0.45
TRAPPC2L-210ENST00000565309 THRAP3Q9Y2W1 955 aaKnown RBP17.84■□□□□ 0.45
TRAPPC2L-210ENST00000565309 BARGINQ6ZT62 677 aa17.83■□□□□ 0.44
TRAPPC2L-210ENST00000565309 INSRP06213 1382 aa17.82■□□□□ 0.44
TRAPPC2L-210ENST00000565309 ZNF316A6NFI3 1004 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC2L-210ENST00000565309 EP400Q96L91 3159 aa17.81■□□□□ 0.44
TRAPPC2L-210ENST00000565309 THSD7AQ9UPZ6 1657 aa17.8■□□□□ 0.44
TRAPPC2L-210ENST00000565309 SMG6Q86US8 1419 aaKnown RBP17.8■□□□□ 0.44
TRAPPC2L-210ENST00000565309 BRWD3Q6RI45 1802 aa17.79■□□□□ 0.44
TRAPPC2L-210ENST00000565309 FAM208AQ9UK61 1670 aaKnown RBP17.78■□□□□ 0.44
TRAPPC2L-210ENST00000565309 MTHFSP49914 203 aa17.77■□□□□ 0.44
TRAPPC2L-210ENST00000565309 NBPF6Q5VWK0 638 aa17.77■□□□□ 0.44
TRAPPC2L-210ENST00000565309 KRT27Q7Z3Y8 459 aa17.77■□□□□ 0.44
TRAPPC2L-210ENST00000565309 NBPF4Q96M43 638 aa17.77■□□□□ 0.44
TRAPPC2L-210ENST00000565309 RGPD2P0DJD1 1756 aa17.76■□□□□ 0.43
TRAPPC2L-210ENST00000565309 SOCS7O14512 581 aa17.76■□□□□ 0.43
TRAPPC2L-210ENST00000565309 EIF4A2Q14240 407 aaKnown RBP17.75■□□□□ 0.43
TRAPPC2L-210ENST00000565309 USHBP1Q8N6Y0 703 aa17.75■□□□□ 0.43
TRAPPC2L-210ENST00000565309 CDCA7Q9BWT1 371 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC2L-210ENST00000565309 DISP2A7MBM2 1401 aa17.74■□□□□ 0.43
TRAPPC2L-210ENST00000565309 PDE3BQ13370 1112 aa17.74■□□□□ 0.43
TRAPPC2L-210ENST00000565309 PARP4Q9UKK3 1724 aaKnown RBP17.73■□□□□ 0.43
TRAPPC2L-210ENST00000565309 WNK3Q9BYP7 1800 aa17.73■□□□□ 0.43
TRAPPC2L-210ENST00000565309 IL2RBP14784 551 aa17.73■□□□□ 0.43
TRAPPC2L-210ENST00000565309 DDB1Q16531 1140 aa17.73■□□□□ 0.43
TRAPPC2L-210ENST00000565309 FAM182BQ5T319 152 aa17.72■□□□□ 0.43
TRAPPC2L-210ENST00000565309 EYA1Q99502 592 aa17.72■□□□□ 0.43
TRAPPC2L-210ENST00000565309 EXOC5O00471 708 aa17.71■□□□□ 0.43
TRAPPC2L-210ENST00000565309 PPP2R1AP30153 589 aa17.71■□□□□ 0.43
TRAPPC2L-210ENST00000565309 LRRC37A3O60309 1634 aa17.7■□□□□ 0.42
TRAPPC2L-210ENST00000565309 PARD3Q8TEW0 1356 aa17.69■□□□□ 0.42
TRAPPC2L-210ENST00000565309 IL13P35225 146 aa17.68■□□□□ 0.42
TRAPPC2L-210ENST00000565309 RAPGEF4Q8WZA2 1011 aa17.68■□□□□ 0.42
TRAPPC2L-210ENST00000565309 UPF1Q92900 1129 aaKnown RBP eCLIP17.68■□□□□ 0.42
TRAPPC2L-210ENST00000565309 MEGF6O75095 1541 aa17.67■□□□□ 0.42
TRAPPC2L-210ENST00000565309 IGSF1Q8N6C5 1336 aa17.67■□□□□ 0.42
TRAPPC2L-210ENST00000565309 NCAPD2Q15021 1401 aa17.66■□□□□ 0.42
TRAPPC2L-210ENST00000565309 TNS2Q63HR2 1409 aa17.66■□□□□ 0.42
TRAPPC2L-210ENST00000565309 DIAPH1O60610 1272 aaKnown RBP17.66■□□□□ 0.42
TRAPPC2L-210ENST00000565309 TATP17735 454 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC2L-210ENST00000565309 RALBP1Q15311 655 aa17.66■□□□□ 0.42
TRAPPC2L-210ENST00000565309 FAM196AQ6ZSG2 479 aa17.66■□□□□ 0.42
TRAPPC2L-210ENST00000565309 MARCH10Q8NA82 808 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC2L-210ENST00000565309 ZCRB1Q8TBF4 217 aaKnown RBP17.65■□□□□ 0.42
TRAPPC2L-210ENST00000565309 CFAP53Q96M91 514 aa17.65■□□□□ 0.42
TRAPPC2L-210ENST00000565309 OVOS2A0A0G2JMS6 1433 aa17.64■□□□□ 0.42
TRAPPC2L-210ENST00000565309 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC2L-210ENST00000565309 DDX54Q8TDD1 881 aaKnown RBP17.63■□□□□ 0.41
TRAPPC2L-210ENST00000565309 SULT6B1Q6IMI4 303 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms