RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 VRTNQ9H8Y1 702 aa8.87□□□□□ -0.99
CDH1-207ENST00000564745 ZBTB24O43167 697 aaPredicted RBP8.86□□□□□ -0.99
CDH1-207ENST00000564745 ATG7O95352 703 aa8.86□□□□□ -0.99
CDH1-207ENST00000564745 NCOA4Q13772 614 aa8.86□□□□□ -0.99
CDH1-207ENST00000564745 PLEKHM2Q8IWE5 1019 aa8.86□□□□□ -0.99
CDH1-207ENST00000564745 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.86□□□□□ -0.99
CDH1-207ENST00000564745 CHIC2Q9UKJ5 165 aa8.86□□□□□ -0.99
CDH1-207ENST00000564745 MCCD1P59942 119 aaPredicted RBP8.85□□□□□ -0.99
CDH1-207ENST00000564745 TRAF7Q6Q0C0 670 aa8.85□□□□□ -0.99
CDH1-207ENST00000564745 EMID1Q96A84 441 aaPredicted RBP8.85□□□□□ -0.99
CDH1-207ENST00000564745 PODXL2Q9NZ53 605 aa8.85□□□□□ -0.99
CDH1-207ENST00000564745 CSB-PGBD3P0DP91 1061 aa8.84□□□□□ -0.99
CDH1-207ENST00000564745 IFFO2Q5TF58 517 aa8.84□□□□□ -0.99
CDH1-207ENST00000564745 SLC10A4Q96EP9 437 aa8.84□□□□□ -0.99
CDH1-207ENST00000564745 MKRN1Q9UHC7 482 aaKnown RBP8.84□□□□□ -0.99
CDH1-207ENST00000564745 ZMIZ1Q9ULJ6 1067 aa8.84□□□□□ -0.99
CDH1-207ENST00000564745 RGS20O76081 388 aa8.83□□□□□ -1
CDH1-207ENST00000564745 GGCXP38435 758 aa8.83□□□□□ -1
CDH1-207ENST00000564745 CRTC2Q53ET0 693 aaPredicted RBP8.83□□□□□ -1
CDH1-207ENST00000564745 AEBP1Q8IUX7 1158 aa8.83□□□□□ -1
CDH1-207ENST00000564745 ZNF592Q92610 1267 aa8.83□□□□□ -1
CDH1-207ENST00000564745 CDCA7Q9BWT1 371 aaPredicted RBP8.83□□□□□ -1
CDH1-207ENST00000564745 TMEM88BA6NKF7 163 aa8.82□□□□□ -1
CDH1-207ENST00000564745 LIAT1Q6ZQX7 453 aa8.82□□□□□ -1
CDH1-207ENST00000564745 STK32AQ8WU08 396 aa8.82□□□□□ -1
CDH1-207ENST00000564745 RAB15P59190 212 aa8.81□□□□□ -1
CDH1-207ENST00000564745 OXLD1Q5BKU9 147 aa8.81□□□□□ -1
CDH1-207ENST00000564745 TRMT44Q8IYL2 757 aaKnown RBP8.81□□□□□ -1
CDH1-207ENST00000564745 DOLKQ9UPQ8 538 aa8.81□□□□□ -1
CDH1-207ENST00000564745 ESPNB1AK53 854 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L15C9J2P7 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L10C9JJH3 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L13C9JLJ4 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L12C9JPN9 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L11C9JVI0 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L21D6R901 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L18D6R9N7 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L22D6RA61 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L17D6RBQ6 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L19D6RCP7 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L20D6RJB6 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 RASA1P20936 1047 aa8.8□□□□□ -1
CDH1-207ENST00000564745 WNT7BP56706 349 aa8.8□□□□□ -1
CDH1-207ENST00000564745 USP17L24Q0WX57 530 aa8.8□□□□□ -1
CDH1-207ENST00000564745 NOVA2Q9UNW9 492 aaKnown RBP8.8□□□□□ -1
CDH1-207ENST00000564745 USTQ9Y2C2 406 aa8.8□□□□□ -1
CDH1-207ENST00000564745 RPIAP49247 311 aa8.79□□□□□ -1
CDH1-207ENST00000564745 CLDN10P78369 228 aa8.79□□□□□ -1
CDH1-207ENST00000564745 PTK7Q13308 1070 aa8.79□□□□□ -1
CDH1-207ENST00000564745 EML3Q32P44 896 aa8.79□□□□□ -1
CDH1-207ENST00000564745 MAP7D1Q3KQU3 841 aa8.79□□□□□ -1
CDH1-207ENST00000564745 TMEM164Q5U3C3 297 aa8.79□□□□□ -1
CDH1-207ENST00000564745 KCTD15Q96SI1 283 aaPredicted RBP8.79□□□□□ -1
CDH1-207ENST00000564745 PCDHB11Q9Y5F2 797 aa8.79□□□□□ -1
CDH1-207ENST00000564745 VARSP26640 1264 aaKnown RBP8.78□□□□□ -1
CDH1-207ENST00000564745 NBPF20Q3BBV1 942 aa8.78□□□□□ -1
CDH1-207ENST00000564745 RC3H1Q5TC82 1133 aaKnown RBP8.78□□□□□ -1
CDH1-207ENST00000564745 KIAA1024Q9UPX6 916 aa8.78□□□□□ -1
CDH1-207ENST00000564745 ZBTB7CA1YPR0 619 aa8.77□□□□□ -1.01
CDH1-207ENST00000564745 FAM196BA6NMK8 535 aa8.77□□□□□ -1.01
CDH1-207ENST00000564745 ELOAQ14241 798 aaKnown RBP8.77□□□□□ -1.01
CDH1-207ENST00000564745 ARID5BQ14865 1188 aa8.77□□□□□ -1.01
CDH1-207ENST00000564745 OGFOD1Q8N543 542 aa8.77□□□□□ -1.01
CDH1-207ENST00000564745 EHBP1Q8NDI1 1231 aa8.77□□□□□ -1.01
CDH1-207ENST00000564745 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
CDH1-207ENST00000564745 A0A0G2JS52 829 aa8.76□□□□□ -1.01
CDH1-207ENST00000564745 ATP5J2-PTCD1G3V325 749 aa8.76□□□□□ -1.01
CDH1-207ENST00000564745 CD2BP2O95400 341 aaKnown RBP8.76□□□□□ -1.01
CDH1-207ENST00000564745 INTS6LQ5JSJ4 861 aaKnown RBP8.76□□□□□ -1.01
CDH1-207ENST00000564745 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
CDH1-207ENST00000564745 VASH1Q7L8A9 365 aaPredicted RBP8.76□□□□□ -1.01
CDH1-207ENST00000564745 KCTD17Q8N5Z5 321 aa8.76□□□□□ -1.01
CDH1-207ENST00000564745 TLL2Q9Y6L7 1015 aa8.76□□□□□ -1.01
CDH1-207ENST00000564745 ZBTB7BO15156 539 aaPredicted RBP8.75□□□□□ -1.01
CDH1-207ENST00000564745 LZTS3O60299 673 aaPredicted RBP8.75□□□□□ -1.01
CDH1-207ENST00000564745 SCTRP47872 440 aa8.75□□□□□ -1.01
CDH1-207ENST00000564745 RNF20Q5VTR2 975 aa8.75□□□□□ -1.01
CDH1-207ENST00000564745 IRX2Q9BZI1 471 aaPredicted RBP8.75□□□□□ -1.01
CDH1-207ENST00000564745 SLAIN2Q9P270 581 aa8.75□□□□□ -1.01
CDH1-207ENST00000564745 NOD1Q9Y239 953 aa8.75□□□□□ -1.01
CDH1-207ENST00000564745 ERVH48-1M5A8F1 160 aa8.74□□□□□ -1.01
CDH1-207ENST00000564745 DKK1O94907 266 aa8.74□□□□□ -1.01
CDH1-207ENST00000564745 GTF2IP78347 998 aa8.74□□□□□ -1.01
CDH1-207ENST00000564745 FAM69CQ0P6D2 419 aa8.74□□□□□ -1.01
CDH1-207ENST00000564745 DPYDQ12882 1025 aa8.74□□□□□ -1.01
CDH1-207ENST00000564745 ANKMY2Q8IV38 441 aa8.74□□□□□ -1.01
CDH1-207ENST00000564745 DNAAF2Q9NVR5 837 aaKnown RBP8.74□□□□□ -1.01
CDH1-207ENST00000564745 CDV3Q9UKY7 258 aaKnown RBP8.74□□□□□ -1.01
CDH1-207ENST00000564745 MAP4K5Q9Y4K4 846 aa8.74□□□□□ -1.01
CDH1-207ENST00000564745 PCDHGA11Q9Y5H2 935 aa8.74□□□□□ -1.01
CDH1-207ENST00000564745 SIAH2O43255 324 aa8.73□□□□□ -1.01
CDH1-207ENST00000564745 SLC19A1P41440 591 aa8.73□□□□□ -1.01
CDH1-207ENST00000564745 GRM5P41594 1212 aa8.73□□□□□ -1.01
CDH1-207ENST00000564745 PDE4CQ08493 712 aa8.73□□□□□ -1.01
CDH1-207ENST00000564745 SEPT12Q8IYM1 358 aa8.73□□□□□ -1.01
CDH1-207ENST00000564745 TMPRSS4Q9NRS4 437 aa8.73□□□□□ -1.01
CDH1-207ENST00000564745 FSHRP23945 695 aa8.72□□□□□ -1.01
CDH1-207ENST00000564745 TRIM50Q86XT4 487 aa8.72□□□□□ -1.01
CDH1-207ENST00000564745 FAM200AQ8TCP9 573 aa8.72□□□□□ -1.01
CDH1-207ENST00000564745 MRGPRX2Q96LB1 330 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms