RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-208ENST00000564634 DDB1Q16531 1140 aa35.87■■■■□ 3.33
CYLD-208ENST00000564634 PPP1R1BQ9UD71 204 aaPredicted RBP35.87■■■■□ 3.33
CYLD-208ENST00000564634 ROCK2O75116 1388 aaKnown RBP35.87■■■■□ 3.33
CYLD-208ENST00000564634 C11orf95C9JLR9 678 aaPredicted RBP35.86■■■■□ 3.33
CYLD-208ENST00000564634 SPON1Q9HCB6 807 aa35.86■■■■□ 3.33
CYLD-208ENST00000564634 CPSF1Q10570 1443 aaKnown RBP35.84■■■■□ 3.33
CYLD-208ENST00000564634 PTF1AQ7RTS3 328 aa35.83■■■■□ 3.33
CYLD-208ENST00000564634 AXIN2Q9Y2T1 843 aa35.83■■■■□ 3.33
CYLD-208ENST00000564634 SOX12O15370 315 aa35.82■■■■□ 3.32
CYLD-208ENST00000564634 KCNQ2O43526 872 aa35.82■■■■□ 3.32
CYLD-208ENST00000564634 EVC2Q86UK5 1308 aa35.82■■■■□ 3.32
CYLD-208ENST00000564634 WDR17Q8IZU2 1322 aa35.82■■■■□ 3.32
CYLD-208ENST00000564634 ANO8Q9HCE9 1232 aaPredicted RBP35.81■■■■□ 3.32
CYLD-208ENST00000564634 AKAP12Q02952 1782 aa35.8■■■■□ 3.32
CYLD-208ENST00000564634 RGPD5Q99666 1765 aa35.79■■■■□ 3.32
CYLD-208ENST00000564634 YY1P25490 414 aa35.79■■■■□ 3.32
CYLD-208ENST00000564634 PLSCR1O15162 318 aa35.76■■■■□ 3.32
CYLD-208ENST00000564634 MARCH10Q8NA82 808 aaPredicted RBP35.76■■■■□ 3.32
CYLD-208ENST00000564634 BCL11BQ9C0K0 894 aaPredicted RBP35.76■■■■□ 3.32
CYLD-208ENST00000564634 TTC21BQ7Z4L5 1316 aa35.76■■■■□ 3.31
CYLD-208ENST00000564634 CASZ1Q86V15 1759 aa35.76■■■■□ 3.31
CYLD-208ENST00000564634 NINLQ9Y2I6 1382 aa35.75■■■■□ 3.31
CYLD-208ENST00000564634 CSB-PGBD3P0DP91 1061 aa35.74■■■■□ 3.31
CYLD-208ENST00000564634 ARHGEF25Q86VW2 580 aa35.74■■■■□ 3.31
CYLD-208ENST00000564634 TIMELESSQ9UNS1 1208 aa35.74■■■■□ 3.31
CYLD-208ENST00000564634 CCER1Q8TC90 406 aaPredicted RBP35.72■■■■□ 3.31
CYLD-208ENST00000564634 KCNH5Q8NCM2 988 aa35.71■■■■□ 3.31
CYLD-208ENST00000564634 CARD11Q9BXL7 1154 aa35.71■■■■□ 3.31
CYLD-208ENST00000564634 NFAT5O94916 1531 aa35.71■■■■□ 3.31
CYLD-208ENST00000564634 CDCA7Q9BWT1 371 aaPredicted RBP35.7■■■■□ 3.31
CYLD-208ENST00000564634 PDGFDQ9GZP0 370 aaPredicted RBP35.7■■■■□ 3.31
CYLD-208ENST00000564634 ZNF692Q9BU19 519 aaPredicted RBP35.68■■■■□ 3.3
CYLD-208ENST00000564634 CARD10Q9BWT7 1032 aa35.68■■■■□ 3.3
CYLD-208ENST00000564634 BCL9O00512 1426 aa35.67■■■■□ 3.3
CYLD-208ENST00000564634 TTC21AQ8NDW8 1320 aa35.67■■■■□ 3.3
CYLD-208ENST00000564634 PROM2Q8N271 834 aa35.67■■■■□ 3.3
CYLD-208ENST00000564634 KTN1Q86UP2 1357 aaKnown RBP35.64■■■■□ 3.3
CYLD-208ENST00000564634 DCAF8L1A6NGE4 600 aa35.64■■■■□ 3.3
CYLD-208ENST00000564634 ZBTB7AO95365 584 aa35.64■■■■□ 3.3
CYLD-208ENST00000564634 MYOM1P52179 1685 aa35.63■■■■□ 3.29
CYLD-208ENST00000564634 TNS2Q63HR2 1409 aa35.62■■■■□ 3.29
CYLD-208ENST00000564634 MON2Q7Z3U7 1717 aa35.62■■■■□ 3.29
CYLD-208ENST00000564634 TXNRD1Q16881 649 aa35.6■■■■□ 3.29
CYLD-208ENST00000564634 CCDC7Q96M83 1385 aa35.6■■■■□ 3.29
CYLD-208ENST00000564634 ABCC6O95255 1503 aa35.59■■■■□ 3.29
CYLD-208ENST00000564634 EXOC5O00471 708 aa35.59■■■■□ 3.29
CYLD-208ENST00000564634 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.57■■■■□ 3.28
CYLD-208ENST00000564634 STK32BQ9NY57 414 aa35.57■■■■□ 3.28
CYLD-208ENST00000564634 NHSQ6T4R5 1651 aa35.56■■■■□ 3.28
CYLD-208ENST00000564634 ATF5Q9Y2D1 282 aaPredicted RBP35.56■■■■□ 3.28
CYLD-208ENST00000564634 PTGER2P43116 358 aa35.53■■■■□ 3.28
CYLD-208ENST00000564634 SBNO2Q9Y2G9 1366 aa35.52■■■■□ 3.28
CYLD-208ENST00000564634 LTN1O94822 1766 aa35.51■■■■□ 3.28
CYLD-208ENST00000564634 SLC15A2Q16348 729 aa35.51■■■■□ 3.28
CYLD-208ENST00000564634 ACSBG1Q96GR2 724 aa35.51■■■■□ 3.28
CYLD-208ENST00000564634 USP54Q70EL1 1684 aa35.51■■■■□ 3.28
CYLD-208ENST00000564634 NME9Q86XW9 330 aa35.5■■■■□ 3.27
CYLD-208ENST00000564634 ERBB3P21860 1342 aa35.5■■■■□ 3.27
CYLD-208ENST00000564634 NLRP2Q9NX02 1062 aa35.49■■■■□ 3.27
CYLD-208ENST00000564634 USP31Q70CQ4 1352 aa35.49■■■■□ 3.27
CYLD-208ENST00000564634 CD163L1Q9NR16 1453 aa35.48■■■■□ 3.27
CYLD-208ENST00000564634 PAPPAQ13219 1627 aa35.43■■■■□ 3.26
CYLD-208ENST00000564634 TMC1Q8TDI8 760 aa35.43■■■■□ 3.26
CYLD-208ENST00000564634 FHDC1Q9C0D6 1143 aaPredicted RBP35.43■■■■□ 3.26
CYLD-208ENST00000564634 BTAF1O14981 1849 aa35.43■■■■□ 3.26
CYLD-208ENST00000564634 IL2RBP14784 551 aa35.42■■■■□ 3.26
CYLD-208ENST00000564634 ANKRD24Q8TF21 1146 aa35.41■■■■□ 3.26
CYLD-208ENST00000564634 MTFR1LQ9H019 292 aa35.41■■■■□ 3.26
CYLD-208ENST00000564634 ST20-MTHFSA0A0A6YYL1 179 aa35.4■■■■□ 3.26
CYLD-208ENST00000564634 SLC24A1O60721 1099 aa35.39■■■■□ 3.26
CYLD-208ENST00000564634 HDGFL2Q7Z4V5 671 aaPredicted RBP35.37■■■■□ 3.25
CYLD-208ENST00000564634 SYT17Q9BSW7 474 aa35.37■■■■□ 3.25
CYLD-208ENST00000564634 EDC4Q6P2E9 1401 aaKnown RBP35.36■■■■□ 3.25
CYLD-208ENST00000564634 SLC12A5Q9H2X9 1139 aa35.36■■■■□ 3.25
CYLD-208ENST00000564634 UTRNP46939 3433 aa35.35■■■■□ 3.25
CYLD-208ENST00000564634 SGIP1Q9BQI5 828 aa35.35■■■■□ 3.25
CYLD-208ENST00000564634 USP47Q96K76 1375 aa35.35■■■■□ 3.25
CYLD-208ENST00000564634 TESK2Q96S53 571 aa35.34■■■■□ 3.25
CYLD-208ENST00000564634 ZNF827Q17R98 1081 aa35.33■■■■□ 3.25
CYLD-208ENST00000564634 A0A1W2PP64 1363 aa35.33■■■■□ 3.25
CYLD-208ENST00000564634 PUS7Q96PZ0 661 aaKnown RBP35.32■■■■□ 3.24
CYLD-208ENST00000564634 KAT6BQ8WYB5 2073 aa35.31■■■■□ 3.24
CYLD-208ENST00000564634 LRRC4BQ9NT99 713 aa35.29■■■■□ 3.24
CYLD-208ENST00000564634 ZNF784Q8NCA9 323 aaPredicted RBP35.28■■■■□ 3.24
CYLD-208ENST00000564634 LTV1Q96GA3 475 aaPredicted RBP35.28■■■■□ 3.24
CYLD-208ENST00000564634 ARXQ96QS3 562 aa35.28■■■■□ 3.24
CYLD-208ENST00000564634 TERF2IPQ9NYB0 399 aa35.27■■■■□ 3.24
CYLD-208ENST00000564634 FAM208AQ9UK61 1670 aaKnown RBP35.26■■■■□ 3.23
CYLD-208ENST00000564634 DDX54Q8TDD1 881 aaKnown RBP35.25■■■■□ 3.23
CYLD-208ENST00000564634 IP6K1Q92551 441 aa35.21■■■■□ 3.23
CYLD-208ENST00000564634 TMF1P82094 1093 aa35.2■■■■□ 3.23
CYLD-208ENST00000564634 CHD4Q14839 1912 aa35.2■■■■□ 3.22
CYLD-208ENST00000564634 DOT1LQ8TEK3 1739 aa35.19■■■■□ 3.22
CYLD-208ENST00000564634 MAP3K5Q99683 1374 aa35.18■■■■□ 3.22
CYLD-208ENST00000564634 KLHL34Q8N239 644 aa35.18■■■■□ 3.22
CYLD-208ENST00000564634 AKT1S1Q96B36 256 aa35.18■■■■□ 3.22
CYLD-208ENST00000564634 SYTL4Q96C24 671 aaPredicted RBP35.17■■■■□ 3.22
CYLD-208ENST00000564634 QSER1Q2KHR3 1735 aa35.17■■■■□ 3.22
CYLD-208ENST00000564634 TUBGCP6Q96RT7 1819 aa35.16■■■■□ 3.22
CYLD-208ENST00000564634 KCNQ4P56696 695 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms