RNA–Protein interactions for RNA: ENST00000564470.1

ATP2A1-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 467 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-207ENST00000564470 GPKOWQ92917 476 aaPredicted RBP eCLIP6.97□□□□□ -1.29
ATP2A1-207ENST00000564470 IRF7Q92985 503 aa6.97□□□□□ -1.29
ATP2A1-207ENST00000564470 DDRGK1Q96HY6 314 aa6.97□□□□□ -1.29
ATP2A1-207ENST00000564470 C1QTNF2Q9BXJ5 285 aa6.97□□□□□ -1.29
ATP2A1-207ENST00000564470 MAN1A2O60476 641 aa6.96□□□□□ -1.3
ATP2A1-207ENST00000564470 GMPRP36959 345 aa6.96□□□□□ -1.3
ATP2A1-207ENST00000564470 SH3D19Q5HYK7 790 aa6.96□□□□□ -1.3
ATP2A1-207ENST00000564470 ARHGAP9Q9BRR9 750 aa6.96□□□□□ -1.3
ATP2A1-207ENST00000564470 THOC2Q8NI27 1593 aaKnown RBP6.95□□□□□ -1.3
ATP2A1-207ENST00000564470 H3BM21 787 aa6.95□□□□□ -1.3
ATP2A1-207ENST00000564470 AP1G2O75843 785 aa6.95□□□□□ -1.3
ATP2A1-207ENST00000564470 NR6A1Q15406 480 aa6.95□□□□□ -1.3
ATP2A1-207ENST00000564470 PDXDC2PQ6P474 469 aa6.95□□□□□ -1.3
ATP2A1-207ENST00000564470 ZBTB33Q86T24 672 aa6.95□□□□□ -1.3
ATP2A1-207ENST00000564470 TRMT44Q8IYL2 757 aaKnown RBP6.95□□□□□ -1.3
ATP2A1-207ENST00000564470 FKBPLQ9UIM3 349 aa6.95□□□□□ -1.3
ATP2A1-207ENST00000564470 ERFEQ4G0M1 354 aa6.94□□□□□ -1.3
ATP2A1-207ENST00000564470 FBXO31Q5XUX0 539 aaPredicted RBP6.94□□□□□ -1.3
ATP2A1-207ENST00000564470 CCDC116Q8IYX3 515 aa6.94□□□□□ -1.3
ATP2A1-207ENST00000564470 MAP4K5Q9Y4K4 846 aa6.94□□□□□ -1.3
ATP2A1-207ENST00000564470 EMILIN1Q9Y6C2 1016 aa6.94□□□□□ -1.3
ATP2A1-207ENST00000564470 LINC00528Q8N1L1 170 aa6.93□□□□□ -1.3
ATP2A1-207ENST00000564470 PPP2R2DQ66LE6 453 aa6.92□□□□□ -1.3
ATP2A1-207ENST00000564470 TSEN34Q9BSV6 310 aaKnown RBP6.92□□□□□ -1.3
ATP2A1-207ENST00000564470 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATP2A1-207ENST00000564470 ERBB4Q15303 1308 aa6.92□□□□□ -1.3
ATP2A1-207ENST00000564470 HMGXB3Q12766 1538 aa6.91□□□□□ -1.3
ATP2A1-207ENST00000564470 PTK2Q05397 1052 aa6.91□□□□□ -1.3
ATP2A1-207ENST00000564470 PPP1R26Q5T8A7 1209 aaPredicted RBP6.91□□□□□ -1.3
ATP2A1-207ENST00000564470 MEIOBQ8N635 442 aa6.91□□□□□ -1.3
ATP2A1-207ENST00000564470 SLC10A4Q96EP9 437 aa6.91□□□□□ -1.3
ATP2A1-207ENST00000564470 KCTD15Q96SI1 283 aaPredicted RBP6.91□□□□□ -1.3
ATP2A1-207ENST00000564470 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
ATP2A1-207ENST00000564470 NCAPD3P42695 1498 aa6.91□□□□□ -1.3
ATP2A1-207ENST00000564470 LAMC3Q9Y6N6 1575 aa6.91□□□□□ -1.3
ATP2A1-207ENST00000564470 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.3
ATP2A1-207ENST00000564470 CDV3Q9UKY7 258 aaKnown RBP6.9□□□□□ -1.3
ATP2A1-207ENST00000564470 SMARCA2P51531 1590 aa6.9□□□□□ -1.31
ATP2A1-207ENST00000564470 FIGNL2A6NMB9 653 aa6.89□□□□□ -1.31
ATP2A1-207ENST00000564470 CBLBQ13191 982 aa6.89□□□□□ -1.31
ATP2A1-207ENST00000564470 ZSCAN1Q8NBB4 408 aa6.89□□□□□ -1.31
ATP2A1-207ENST00000564470 PNMA1Q8ND90 353 aa6.89□□□□□ -1.31
ATP2A1-207ENST00000564470 EPS8L1Q8TE68 723 aa6.89□□□□□ -1.31
ATP2A1-207ENST00000564470 SOS2Q07890 1332 aaPredicted RBP6.89□□□□□ -1.31
ATP2A1-207ENST00000564470 ZC3H4Q9UPT8 1303 aaKnown RBP6.89□□□□□ -1.31
ATP2A1-207ENST00000564470 PPFIA3O75145 1194 aa6.88□□□□□ -1.31
ATP2A1-207ENST00000564470 BAZ1AQ9NRL2 1556 aaPredicted RBP6.87□□□□□ -1.31
ATP2A1-207ENST00000564470 TTLL8A6PVC2 850 aa6.87□□□□□ -1.31
ATP2A1-207ENST00000564470 DHX9Q08211 1270 aaKnown RBP6.87□□□□□ -1.31
ATP2A1-207ENST00000564470 ADAM32Q8TC27 787 aa6.87□□□□□ -1.31
ATP2A1-207ENST00000564470 DNMT3LQ9UJW3 386 aa6.87□□□□□ -1.31
ATP2A1-207ENST00000564470 GPSM3Q9Y4H4 160 aa6.87□□□□□ -1.31
ATP2A1-207ENST00000564470 USP17L8P0C7I0 530 aa6.86□□□□□ -1.31
ATP2A1-207ENST00000564470 RFC5P40937 340 aa6.86□□□□□ -1.31
ATP2A1-207ENST00000564470 RAB15P59190 212 aa6.86□□□□□ -1.31
ATP2A1-207ENST00000564470 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.86□□□□□ -1.311e-6■■■■□ 25.2
ATP2A1-207ENST00000564470 Q6ZVU0 165 aa6.86□□□□□ -1.31
ATP2A1-207ENST00000564470 PCMTD1Q96MG8 357 aaPredicted RBP6.86□□□□□ -1.31
ATP2A1-207ENST00000564470 OCSTAMPQ9BR26 566 aa6.86□□□□□ -1.31
ATP2A1-207ENST00000564470 HMX1Q9NP08 348 aaPredicted RBP6.86□□□□□ -1.31
ATP2A1-207ENST00000564470 KIF21AQ7Z4S6 1674 aa6.85□□□□□ -1.31
ATP2A1-207ENST00000564470 INTS6LQ5JSJ4 861 aaKnown RBP6.85□□□□□ -1.31
ATP2A1-207ENST00000564470 DZIP3Q86Y13 1208 aaKnown RBP6.85□□□□□ -1.31
ATP2A1-207ENST00000564470 AGBL1Q96MI9 1066 aa6.85□□□□□ -1.31
ATP2A1-207ENST00000564470 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
ATP2A1-207ENST00000564470 RELBQ01201 579 aa6.84□□□□□ -1.31
ATP2A1-207ENST00000564470 NEUROD2Q15784 382 aa6.84□□□□□ -1.31
ATP2A1-207ENST00000564470 IL27Q8NEV9 243 aa6.84□□□□□ -1.31
ATP2A1-207ENST00000564470 TMPRSS4Q9NRS4 437 aa6.84□□□□□ -1.31
ATP2A1-207ENST00000564470 PDS5BQ9NTI5 1447 aa6.84□□□□□ -1.32
ATP2A1-207ENST00000564470 NESP48681 1621 aa6.83□□□□□ -1.32
ATP2A1-207ENST00000564470 SPINT1O43278 529 aa6.83□□□□□ -1.32
ATP2A1-207ENST00000564470 VSIG8P0DPA2 414 aa6.83□□□□□ -1.32
ATP2A1-207ENST00000564470 PTSQ03393 145 aa6.83□□□□□ -1.32
ATP2A1-207ENST00000564470 NBPF20Q3BBV1 942 aa6.83□□□□□ -1.32
ATP2A1-207ENST00000564470 TMEM259Q4ZIN3 620 aa6.83□□□□□ -1.32
ATP2A1-207ENST00000564470 ZNF395Q9H8N7 513 aaPredicted RBP6.83□□□□□ -1.32
ATP2A1-207ENST00000564470 ATAD2BQ9ULI0 1458 aa6.83□□□□□ -1.32
ATP2A1-207ENST00000564470 BAZ1BQ9UIG0 1483 aaKnown RBP6.81□□□□□ -1.32
ATP2A1-207ENST00000564470 ERVH48-1M5A8F1 160 aa6.81□□□□□ -1.32
ATP2A1-207ENST00000564470 INSM2Q96T92 566 aaPredicted RBP6.81□□□□□ -1.32
ATP2A1-207ENST00000564470 GOPCQ9HD26 462 aa6.81□□□□□ -1.32
ATP2A1-207ENST00000564470 POLMQ9NP87 494 aaPredicted RBP6.81□□□□□ -1.32
ATP2A1-207ENST00000564470 CTSOP43234 321 aaPredicted RBP6.8□□□□□ -1.32
ATP2A1-207ENST00000564470 ZNF784Q8NCA9 323 aaPredicted RBP6.8□□□□□ -1.32
ATP2A1-207ENST00000564470 SMARCA4P51532 1647 aa6.79□□□□□ -1.32
ATP2A1-207ENST00000564470 MRC2Q9UBG0 1479 aa6.79□□□□□ -1.32
ATP2A1-207ENST00000564470 CCDC155Q8N6L0 562 aa6.79□□□□□ -1.32
ATP2A1-207ENST00000564470 GPR161Q8N6U8 529 aaKnown RBP6.79□□□□□ -1.32
ATP2A1-207ENST00000564470 WDR62O43379 1518 aa6.79□□□□□ -1.32
ATP2A1-207ENST00000564470 ADD1P35611 737 aaKnown RBP6.78□□□□□ -1.32
ATP2A1-207ENST00000564470 CNTNAP3BQ96NU0 1288 aa6.78□□□□□ -1.32
ATP2A1-207ENST00000564470 TRIM34Q9BYJ4 488 aa6.78□□□□□ -1.32
ATP2A1-207ENST00000564470 CNTNAP3Q9BZ76 1288 aa6.78□□□□□ -1.32
ATP2A1-207ENST00000564470 PCDHB9Q9Y5E1 797 aa6.78□□□□□ -1.32
ATP2A1-207ENST00000564470 SLC35F4A4IF30 521 aa6.77□□□□□ -1.33
ATP2A1-207ENST00000564470 ZBBXA8MT70 800 aa6.77□□□□□ -1.33
ATP2A1-207ENST00000564470 LILRA1O75019 489 aa6.77□□□□□ -1.33
ATP2A1-207ENST00000564470 PTGIRP43119 386 aa6.77□□□□□ -1.33
ATP2A1-207ENST00000564470 VWA5B2Q8N398 1253 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms