RNA–Protein interactions for RNA: ENST00000564470.1

ATP2A1-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 467 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-207ENST00000564470 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
ATP2A1-207ENST00000564470 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
ATP2A1-207ENST00000564470 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
ATP2A1-207ENST00000564470 PHF23Q9BUL5 403 aaPredicted RBP16.75■□□□□ 0.27
ATP2A1-207ENST00000564470 FOXD1Q16676 465 aa15.77■□□□□ 0.12
ATP2A1-207ENST00000564470 PLPPR3Q6T4P5 718 aa15.22■□□□□ 0.03
ATP2A1-207ENST00000564470 PPP6R1Q9UPN7 881 aa14.84□□□□□ -0.03
ATP2A1-207ENST00000564470 ADRA2BP18089 450 aa14.82□□□□□ -0.04
ATP2A1-207ENST00000564470 PIAS4Q8N2W9 510 aaPredicted RBP14.78□□□□□ -0.04
ATP2A1-207ENST00000564470 MSH5O43196 834 aa14.7□□□□□ -0.06
ATP2A1-207ENST00000564470 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
ATP2A1-207ENST00000564470 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
ATP2A1-207ENST00000564470 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
ATP2A1-207ENST00000564470 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
ATP2A1-207ENST00000564470 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
ATP2A1-207ENST00000564470 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
ATP2A1-207ENST00000564470 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
ATP2A1-207ENST00000564470 HOXD11P31277 338 aaPredicted RBP12.97□□□□□ -0.33
ATP2A1-207ENST00000564470 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
ATP2A1-207ENST00000564470 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
ATP2A1-207ENST00000564470 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
ATP2A1-207ENST00000564470 CACNB1Q02641 598 aaPredicted RBP12.61□□□□□ -0.39
ATP2A1-207ENST00000564470 KCNA4P22459 653 aa12.55□□□□□ -0.4
ATP2A1-207ENST00000564470 RNF39Q9H2S5 420 aa12.54□□□□□ -0.4
ATP2A1-207ENST00000564470 DNAJC5BQ9UF47 199 aa12.46□□□□□ -0.41
ATP2A1-207ENST00000564470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.42
ATP2A1-207ENST00000564470 C1QBPQ07021 282 aaKnown RBP12.38□□□□□ -0.43
ATP2A1-207ENST00000564470 U3KPZ7 1027 aaPredicted RBP12.12□□□□□ -0.47
ATP2A1-207ENST00000564470 SLC4A2P04920 1241 aa12.07□□□□□ -0.48
ATP2A1-207ENST00000564470 CAPN15O75808 1086 aa11.95□□□□□ -0.5
ATP2A1-207ENST00000564470 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
ATP2A1-207ENST00000564470 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
ATP2A1-207ENST00000564470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
ATP2A1-207ENST00000564470 APLP2Q06481 763 aa11.84□□□□□ -0.51
ATP2A1-207ENST00000564470 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
ATP2A1-207ENST00000564470 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
ATP2A1-207ENST00000564470 DSG3P32926 999 aa11.8□□□□□ -0.52
ATP2A1-207ENST00000564470 SAMD1Q6SPF0 538 aaPredicted RBP11.77□□□□□ -0.53
ATP2A1-207ENST00000564470 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
ATP2A1-207ENST00000564470 ZNF219Q9P2Y4 722 aaPredicted RBP11.72□□□□□ -0.53
ATP2A1-207ENST00000564470 ABCB7O75027 752 aa11.67□□□□□ -0.54
ATP2A1-207ENST00000564470 FOXD4L1Q9NU39 408 aa11.66□□□□□ -0.54
ATP2A1-207ENST00000564470 ZBTB22O15209 634 aa11.5□□□□□ -0.57
ATP2A1-207ENST00000564470 POLA2Q14181 598 aa11.49□□□□□ -0.57
ATP2A1-207ENST00000564470 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
ATP2A1-207ENST00000564470 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
ATP2A1-207ENST00000564470 RBM42Q9BTD8 480 aaKnown RBP11.27□□□□□ -0.61
ATP2A1-207ENST00000564470 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
ATP2A1-207ENST00000564470 POTEHQ6S545 545 aa11.13□□□□□ -0.63
ATP2A1-207ENST00000564470 CSRNP3Q8WYN3 585 aa11.11□□□□□ -0.63
ATP2A1-207ENST00000564470 OSCARQ8IYS5 282 aa11.08□□□□□ -0.64
ATP2A1-207ENST00000564470 EHMT2Q96KQ7 1210 aa11.07□□□□□ -0.64
ATP2A1-207ENST00000564470 FBLN2P98095 1184 aa11.04□□□□□ -0.64
ATP2A1-207ENST00000564470 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
ATP2A1-207ENST00000564470 CHRDL2Q6WN34 429 aa10.98□□□□□ -0.65
ATP2A1-207ENST00000564470 REM2Q8IYK8 340 aaPredicted RBP10.94□□□□□ -0.66
ATP2A1-207ENST00000564470 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
ATP2A1-207ENST00000564470 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
ATP2A1-207ENST00000564470 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
ATP2A1-207ENST00000564470 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
ATP2A1-207ENST00000564470 ZNF692Q9BU19 519 aaPredicted RBP10.83□□□□□ -0.68
ATP2A1-207ENST00000564470 PITPNM1O00562 1244 aa10.8□□□□□ -0.68
ATP2A1-207ENST00000564470 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
ATP2A1-207ENST00000564470 CLEC11AQ9Y240 323 aa10.72□□□□□ -0.69
ATP2A1-207ENST00000564470 SSUH2Q9Y2M2 353 aa10.72□□□□□ -0.69
ATP2A1-207ENST00000564470 SPDYE1Q8NFV5 336 aaPredicted RBP10.69□□□□□ -0.7
ATP2A1-207ENST00000564470 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.7
ATP2A1-207ENST00000564470 PABPN1Q86U42 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
ATP2A1-207ENST00000564470 HAX1O00165 279 aa10.58□□□□□ -0.72
ATP2A1-207ENST00000564470 PRKAR2AP13861 404 aaKnown RBP10.56□□□□□ -0.72
ATP2A1-207ENST00000564470 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
ATP2A1-207ENST00000564470 SPDYE4A6NLX3 237 aa10.5□□□□□ -0.73
ATP2A1-207ENST00000564470 SP7Q8TDD2 431 aaPredicted RBP10.49□□□□□ -0.73
ATP2A1-207ENST00000564470 CHADLQ6NUI6 762 aa10.47□□□□□ -0.73
ATP2A1-207ENST00000564470 EVX2Q03828 476 aa10.41□□□□□ -0.74
ATP2A1-207ENST00000564470 STAG3Q9UJ98 1225 aa10.38□□□□□ -0.75
ATP2A1-207ENST00000564470 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
ATP2A1-207ENST00000564470 FARP1Q9Y4F1 1045 aaPredicted RBP10.31□□□□□ -0.76
ATP2A1-207ENST00000564470 CREBZFQ9NS37 354 aa10.26□□□□□ -0.77
ATP2A1-207ENST00000564470 CD44P16070 742 aaKnown RBP10.22□□□□□ -0.77
ATP2A1-207ENST00000564470 GABBR2O75899 941 aa10.18□□□□□ -0.78
ATP2A1-207ENST00000564470 PROM2Q8N271 834 aa10.17□□□□□ -0.78
ATP2A1-207ENST00000564470 ZRANB1Q9UGI0 708 aa10.12□□□□□ -0.79
ATP2A1-207ENST00000564470 NPM1P06748 294 aaKnown RBP eCLIP10.11□□□□□ -0.79
ATP2A1-207ENST00000564470 FKBP8Q14318 412 aa10.1□□□□□ -0.79
ATP2A1-207ENST00000564470 PAK3O75914 559 aaPredicted RBP10.07□□□□□ -0.8
ATP2A1-207ENST00000564470 MNX1P50219 401 aaPredicted RBP10.06□□□□□ -0.8
ATP2A1-207ENST00000564470 MIER1Q8N108 512 aa10.06□□□□□ -0.8
ATP2A1-207ENST00000564470 CLCN6P51797 869 aa10.04□□□□□ -0.8
ATP2A1-207ENST00000564470 PLEKHG5O94827 1062 aa10.03□□□□□ -0.8
ATP2A1-207ENST00000564470 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
ATP2A1-207ENST00000564470 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
ATP2A1-207ENST00000564470 DCBLD2Q96PD2 775 aa9.97□□□□□ -0.81
ATP2A1-207ENST00000564470 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
ATP2A1-207ENST00000564470 TSPYL2Q9H2G4 693 aaPredicted RBP9.95□□□□□ -0.82
ATP2A1-207ENST00000564470 POTEIP0CG38 1075 aa9.94□□□□□ -0.82
ATP2A1-207ENST00000564470 GALR2O43603 387 aaPredicted RBP9.93□□□□□ -0.82
ATP2A1-207ENST00000564470 LHX8Q68G74 356 aa9.86□□□□□ -0.83
ATP2A1-207ENST00000564470 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
ATP2A1-207ENST00000564470 FBXO3Q9UK99 471 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms