RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 SOX12O15370 315 aa23.51■■□□□ 1.35
CPNE7-207ENST00000564421 GJD4Q96KN9 370 aaPredicted RBP23.5■■□□□ 1.35
CPNE7-207ENST00000564421 MAP2P11137 1827 aaKnown RBP23.49■■□□□ 1.35
CPNE7-207ENST00000564421 COL5A2P05997 1499 aaPredicted RBP23.49■■□□□ 1.35
CPNE7-207ENST00000564421 NSD2O96028 1365 aa23.48■■□□□ 1.35
CPNE7-207ENST00000564421 ZBTB7CA1YPR0 619 aa23.47■■□□□ 1.35
CPNE7-207ENST00000564421 EVA1CP58658 441 aa23.45■■□□□ 1.34
CPNE7-207ENST00000564421 KNSTRNQ9Y448 316 aa23.45■■□□□ 1.34
CPNE7-207ENST00000564421 SPATA31A5Q5VU36 1347 aa23.44■■□□□ 1.34
CPNE7-207ENST00000564421 SPATA31A7Q8IWB4 1347 aa23.44■■□□□ 1.34
CPNE7-207ENST00000564421 STRN4Q9NRL3 753 aa23.44■■□□□ 1.34
CPNE7-207ENST00000564421 AXIN2Q9Y2T1 843 aa23.44■■□□□ 1.34
CPNE7-207ENST00000564421 CCDC9Q9Y3X0 531 aaKnown RBP23.44■■□□□ 1.34
CPNE7-207ENST00000564421 RGS12O14924 1447 aa23.43■■□□□ 1.34
CPNE7-207ENST00000564421 FAM208AQ9UK61 1670 aaKnown RBP23.42■■□□□ 1.34
CPNE7-207ENST00000564421 PER1O15534 1290 aaPredicted RBP23.42■■□□□ 1.34
CPNE7-207ENST00000564421 BRWD3Q6RI45 1802 aa23.42■■□□□ 1.34
CPNE7-207ENST00000564421 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
CPNE7-207ENST00000564421 MAP3K19Q56UN5 1328 aa23.41■■□□□ 1.34
CPNE7-207ENST00000564421 RTL1A6NKG5 1358 aa23.4■■□□□ 1.34
CPNE7-207ENST00000564421 WNK3Q9BYP7 1800 aa23.4■■□□□ 1.34
CPNE7-207ENST00000564421 SPATA31A1Q5TZJ5 1347 aa23.4■■□□□ 1.34
CPNE7-207ENST00000564421 ONECUT3O60422 494 aaPredicted RBP23.4■■□□□ 1.34
CPNE7-207ENST00000564421 LARP1Q6PKG0 1096 aaKnown RBP23.4■■□□□ 1.34
CPNE7-207ENST00000564421 IP6K1Q92551 441 aa23.4■■□□□ 1.34
CPNE7-207ENST00000564421 CRB1P82279 1406 aa23.4■■□□□ 1.34
CPNE7-207ENST00000564421 KIF24Q5T7B8 1368 aa23.4■■□□□ 1.34
CPNE7-207ENST00000564421 PEAK1Q9H792 1746 aa23.39■■□□□ 1.34
CPNE7-207ENST00000564421 WDR17Q8IZU2 1322 aa23.39■■□□□ 1.34
CPNE7-207ENST00000564421 AMER1Q5JTC6 1135 aaPredicted RBP23.39■■□□□ 1.33
CPNE7-207ENST00000564421 DIEXFQ68CQ4 756 aaKnown RBP23.39■■□□□ 1.33
CPNE7-207ENST00000564421 THSD7AQ9UPZ6 1657 aa23.38■■□□□ 1.33
CPNE7-207ENST00000564421 FBLN1P23142 703 aa23.38■■□□□ 1.33
CPNE7-207ENST00000564421 HOXC9P31274 260 aa23.36■■□□□ 1.33
CPNE7-207ENST00000564421 AMPHP49418 695 aa23.36■■□□□ 1.33
CPNE7-207ENST00000564421 RRS1Q15050 365 aaKnown RBP23.36■■□□□ 1.33
CPNE7-207ENST00000564421 NPC1L1Q9UHC9 1359 aa23.36■■□□□ 1.33
CPNE7-207ENST00000564421 ERBB3P21860 1342 aa23.35■■□□□ 1.33
CPNE7-207ENST00000564421 RGPD2P0DJD1 1756 aa23.35■■□□□ 1.33
CPNE7-207ENST00000564421 THRAP3Q9Y2W1 955 aaKnown RBP23.35■■□□□ 1.33
CPNE7-207ENST00000564421 BARGINQ6ZT62 677 aa23.34■■□□□ 1.33
CPNE7-207ENST00000564421 TOM1L2Q6ZVM7 507 aa23.34■■□□□ 1.33
CPNE7-207ENST00000564421 TCP11L2Q8N4U5 519 aa23.34■■□□□ 1.33
CPNE7-207ENST00000564421 FLT4P35916 1363 aa23.34■■□□□ 1.33
CPNE7-207ENST00000564421 PARP4Q9UKK3 1724 aaKnown RBP23.33■■□□□ 1.33
CPNE7-207ENST00000564421 CSB-PGBD3P0DP91 1061 aa23.33■■□□□ 1.33
CPNE7-207ENST00000564421 FAM98CQ17RN3 349 aaKnown RBP23.33■■□□□ 1.33
CPNE7-207ENST00000564421 MORC1Q86VD1 984 aa23.32■■□□□ 1.32
CPNE7-207ENST00000564421 SEPT12Q8IYM1 358 aa23.32■■□□□ 1.32
CPNE7-207ENST00000564421 ANKRD24Q8TF21 1146 aa23.32■■□□□ 1.32
CPNE7-207ENST00000564421 USP35Q9P2H5 1018 aa23.32■■□□□ 1.32
CPNE7-207ENST00000564421 CNGB1Q14028 1251 aaPredicted RBP23.31■■□□□ 1.32
CPNE7-207ENST00000564421 CARD10Q9BWT7 1032 aa23.31■■□□□ 1.32
CPNE7-207ENST00000564421 INSRP06213 1382 aa23.3■■□□□ 1.32
CPNE7-207ENST00000564421 EMILIN1Q9Y6C2 1016 aa23.3■■□□□ 1.32
CPNE7-207ENST00000564421 SMG6Q86US8 1419 aaKnown RBP23.29■■□□□ 1.32
CPNE7-207ENST00000564421 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
CPNE7-207ENST00000564421 TNNT2P45379 298 aaPredicted RBP23.28■■□□□ 1.32
CPNE7-207ENST00000564421 CC2D1BQ5T0F9 858 aaKnown RBP23.28■■□□□ 1.32
CPNE7-207ENST00000564421 A0A0G2JS52 829 aa23.26■■□□□ 1.31
CPNE7-207ENST00000564421 ANP32CO43423 234 aa23.26■■□□□ 1.31
CPNE7-207ENST00000564421 MYT1Q01538 1121 aa23.26■■□□□ 1.31
CPNE7-207ENST00000564421 HSP90AB2PQ58FF8 381 aa23.26■■□□□ 1.31
CPNE7-207ENST00000564421 LRRC37A3O60309 1634 aa23.26■■□□□ 1.31
CPNE7-207ENST00000564421 LTV1Q96GA3 475 aaPredicted RBP23.25■■□□□ 1.31
CPNE7-207ENST00000564421 CDCA7Q9BWT1 371 aaPredicted RBP23.25■■□□□ 1.31
CPNE7-207ENST00000564421 NLRP2Q9NX02 1062 aa23.25■■□□□ 1.31
CPNE7-207ENST00000564421 DISP2A7MBM2 1401 aa23.24■■□□□ 1.31
CPNE7-207ENST00000564421 PPM1GO15355 546 aaPredicted RBP23.23■■□□□ 1.31
CPNE7-207ENST00000564421 KRT27Q7Z3Y8 459 aa23.23■■□□□ 1.31
CPNE7-207ENST00000564421 PRKRIP1Q9H875 184 aaPredicted RBP23.19■■□□□ 1.3
CPNE7-207ENST00000564421 RALBP1Q15311 655 aa23.18■■□□□ 1.3
CPNE7-207ENST00000564421 IL2RBP14784 551 aa23.17■■□□□ 1.3
CPNE7-207ENST00000564421 NBPF6Q5VWK0 638 aa23.17■■□□□ 1.3
CPNE7-207ENST00000564421 NBPF4Q96M43 638 aa23.17■■□□□ 1.3
CPNE7-207ENST00000564421 NCAPD2Q15021 1401 aa23.16■■□□□ 1.3
CPNE7-207ENST00000564421 PARD3Q8TEW0 1356 aa23.16■■□□□ 1.3
CPNE7-207ENST00000564421 EP400Q96L91 3159 aa23.16■■□□□ 1.3
CPNE7-207ENST00000564421 DDB1Q16531 1140 aa23.16■■□□□ 1.3
CPNE7-207ENST00000564421 PDE3BQ13370 1112 aa23.15■■□□□ 1.3
CPNE7-207ENST00000564421 SBF2Q86WG5 1849 aa23.15■■□□□ 1.3
CPNE7-207ENST00000564421 MTHFSP49914 203 aa23.14■■□□□ 1.29
CPNE7-207ENST00000564421 EIF4A2Q14240 407 aaKnown RBP23.14■■□□□ 1.29
CPNE7-207ENST00000564421 TNS2Q63HR2 1409 aa23.14■■□□□ 1.29
CPNE7-207ENST00000564421 RGPD1P0DJD0 1748 aa23.13■■□□□ 1.29
CPNE7-207ENST00000564421 SHANK3Q9BYB0 1731 aa23.13■■□□□ 1.29
CPNE7-207ENST00000564421 UPF1Q92900 1129 aaKnown RBP eCLIP23.13■■□□□ 1.29
CPNE7-207ENST00000564421 EXOC5O00471 708 aa23.12■■□□□ 1.29
CPNE7-207ENST00000564421 MIER1Q8N108 512 aa23.12■■□□□ 1.29
CPNE7-207ENST00000564421 EYA1Q99502 592 aa23.11■■□□□ 1.29
CPNE7-207ENST00000564421 MEGF6O75095 1541 aa23.1■■□□□ 1.29
CPNE7-207ENST00000564421 USHBP1Q8N6Y0 703 aa23.1■■□□□ 1.29
CPNE7-207ENST00000564421 PKD1L3Q7Z443 1732 aa23.09■■□□□ 1.29
CPNE7-207ENST00000564421 FAM196AQ6ZSG2 479 aa23.09■■□□□ 1.29
CPNE7-207ENST00000564421 CCDC125Q86Z20 511 aa23.09■■□□□ 1.29
CPNE7-207ENST00000564421 MYBBP1AQ9BQG0 1328 aaKnown RBP23.08■■□□□ 1.29
CPNE7-207ENST00000564421 OVOS2A0A0G2JMS6 1433 aa23.08■■□□□ 1.29
CPNE7-207ENST00000564421 PPP2R1AP30153 589 aa23.08■■□□□ 1.29
CPNE7-207ENST00000564421 BCL9O00512 1426 aa23.08■■□□□ 1.28
CPNE7-207ENST00000564421 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms