RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 COG3Q96JB2 828 aa12.18□□□□□ -0.46
NSMCE1-206ENST00000563900 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
NSMCE1-206ENST00000563900 SPATA31A5Q5VU36 1347 aa12.17□□□□□ -0.46
NSMCE1-206ENST00000563900 SPATA31A7Q8IWB4 1347 aa12.17□□□□□ -0.46
NSMCE1-206ENST00000563900 ONECUT3O60422 494 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-206ENST00000563900 AXIN2Q9Y2T1 843 aa12.17□□□□□ -0.46
NSMCE1-206ENST00000563900 NSD2O96028 1365 aa12.17□□□□□ -0.46
NSMCE1-206ENST00000563900 SOX12O15370 315 aa12.16□□□□□ -0.46
NSMCE1-206ENST00000563900 PER1O15534 1290 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-206ENST00000563900 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-206ENST00000563900 THSD7AQ9UPZ6 1657 aa12.16□□□□□ -0.46
NSMCE1-206ENST00000563900 RGPD5Q99666 1765 aa12.15□□□□□ -0.46
NSMCE1-206ENST00000563900 MAP3K19Q56UN5 1328 aa12.15□□□□□ -0.46
NSMCE1-206ENST00000563900 SPATA31A1Q5TZJ5 1347 aa12.15□□□□□ -0.46
NSMCE1-206ENST00000563900 BLMP54132 1417 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-206ENST00000563900 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-206ENST00000563900 RTL1A6NKG5 1358 aa12.15□□□□□ -0.46
NSMCE1-206ENST00000563900 CRB1P82279 1406 aa12.14□□□□□ -0.47
NSMCE1-206ENST00000563900 FBLN1P23142 703 aa12.14□□□□□ -0.47
NSMCE1-206ENST00000563900 LARP1Q6PKG0 1096 aaKnown RBP12.14□□□□□ -0.47
NSMCE1-206ENST00000563900 KIF24Q5T7B8 1368 aa12.14□□□□□ -0.47
NSMCE1-206ENST00000563900 PEAK1Q9H792 1746 aa12.14□□□□□ -0.47
NSMCE1-206ENST00000563900 ERBB3P21860 1342 aa12.13□□□□□ -0.47
NSMCE1-206ENST00000563900 WDR17Q8IZU2 1322 aa12.13□□□□□ -0.47
NSMCE1-206ENST00000563900 IP6K1Q92551 441 aa12.13□□□□□ -0.47
NSMCE1-206ENST00000563900 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
NSMCE1-206ENST00000563900 NPC1L1Q9UHC9 1359 aa12.13□□□□□ -0.47
NSMCE1-206ENST00000563900 HOXC9P31274 260 aa12.12□□□□□ -0.47
NSMCE1-206ENST00000563900 BARGINQ6ZT62 677 aa12.12□□□□□ -0.47
NSMCE1-206ENST00000563900 SMG6Q86US8 1419 aaKnown RBP12.11□□□□□ -0.47
NSMCE1-206ENST00000563900 ZBTB7CA1YPR0 619 aa12.11□□□□□ -0.47
NSMCE1-206ENST00000563900 SOCS7O14512 581 aa12.11□□□□□ -0.47
NSMCE1-206ENST00000563900 RRS1Q15050 365 aaKnown RBP12.11□□□□□ -0.47
NSMCE1-206ENST00000563900 KNSTRNQ9Y448 316 aa12.11□□□□□ -0.47
NSMCE1-206ENST00000563900 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
NSMCE1-206ENST00000563900 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-206ENST00000563900 FLT4P35916 1363 aa12.1□□□□□ -0.47
NSMCE1-206ENST00000563900 BRWD3Q6RI45 1802 aa12.1□□□□□ -0.47
NSMCE1-206ENST00000563900 WNK3Q9BYP7 1800 aa12.1□□□□□ -0.47
NSMCE1-206ENST00000563900 EVA1CP58658 441 aa12.1□□□□□ -0.47
NSMCE1-206ENST00000563900 SEPT12Q8IYM1 358 aa12.1□□□□□ -0.47
NSMCE1-206ENST00000563900 PIAS4Q8N2W9 510 aaPredicted RBP12.1□□□□□ -0.47
NSMCE1-206ENST00000563900 THRAP3Q9Y2W1 955 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-206ENST00000563900 CCDC9Q9Y3X0 531 aaKnown RBP12.1□□□□□ -0.47
NSMCE1-206ENST00000563900 EP400Q96L91 3159 aa12.1□□□□□ -0.47
NSMCE1-206ENST00000563900 PARP4Q9UKK3 1724 aaKnown RBP12.09□□□□□ -0.47
NSMCE1-206ENST00000563900 INSRP06213 1382 aa12.09□□□□□ -0.47
NSMCE1-206ENST00000563900 FAM98CQ17RN3 349 aaKnown RBP12.09□□□□□ -0.47
NSMCE1-206ENST00000563900 TCP11L2Q8N4U5 519 aa12.09□□□□□ -0.47
NSMCE1-206ENST00000563900 CARD10Q9BWT7 1032 aa12.09□□□□□ -0.47
NSMCE1-206ENST00000563900 POLKQ9UBT6 870 aa12.09□□□□□ -0.47
NSMCE1-206ENST00000563900 MAP2P11137 1827 aaKnown RBP12.09□□□□□ -0.47
NSMCE1-206ENST00000563900 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
NSMCE1-206ENST00000563900 EMILIN1Q9Y6C2 1016 aa12.08□□□□□ -0.48
NSMCE1-206ENST00000563900 AMPHP49418 695 aa12.07□□□□□ -0.48
NSMCE1-206ENST00000563900 NCAPD2Q15021 1401 aa12.07□□□□□ -0.48
NSMCE1-206ENST00000563900 TOM1L2Q6ZVM7 507 aa12.07□□□□□ -0.48
NSMCE1-206ENST00000563900 LRRC37A3O60309 1634 aa12.07□□□□□ -0.48
NSMCE1-206ENST00000563900 HSP90AB2PQ58FF8 381 aa12.06□□□□□ -0.48
NSMCE1-206ENST00000563900 MORC1Q86VD1 984 aa12.06□□□□□ -0.48
NSMCE1-206ENST00000563900 USP35Q9P2H5 1018 aa12.06□□□□□ -0.48
NSMCE1-206ENST00000563900 CSB-PGBD3P0DP91 1061 aa12.05□□□□□ -0.48
NSMCE1-206ENST00000563900 RGPD2P0DJD1 1756 aa12.04□□□□□ -0.48
NSMCE1-206ENST00000563900 TNNT2P45379 298 aaPredicted RBP12.03□□□□□ -0.48
NSMCE1-206ENST00000563900 KRT27Q7Z3Y8 459 aa12.03□□□□□ -0.48
NSMCE1-206ENST00000563900 CDCA7Q9BWT1 371 aaPredicted RBP12.03□□□□□ -0.48
NSMCE1-206ENST00000563900 NLRP2Q9NX02 1062 aa12.03□□□□□ -0.48
NSMCE1-206ENST00000563900 TNS2Q63HR2 1409 aa12.03□□□□□ -0.48
NSMCE1-206ENST00000563900 CC2D1BQ5T0F9 858 aaKnown RBP12.02□□□□□ -0.49
NSMCE1-206ENST00000563900 NBPF6Q5VWK0 638 aa12.02□□□□□ -0.49
NSMCE1-206ENST00000563900 UPF1Q92900 1129 aaKnown RBP eCLIP12.02□□□□□ -0.49
NSMCE1-206ENST00000563900 LTV1Q96GA3 475 aaPredicted RBP12.02□□□□□ -0.49
NSMCE1-206ENST00000563900 NBPF4Q96M43 638 aa12.02□□□□□ -0.49
NSMCE1-206ENST00000563900 BCL9O00512 1426 aa12.01□□□□□ -0.49
NSMCE1-206ENST00000563900 COL3A1P02461 1466 aaPredicted RBP12.01□□□□□ -0.49
NSMCE1-206ENST00000563900 MEGF6O75095 1541 aa12.01□□□□□ -0.49
NSMCE1-206ENST00000563900 A0A0G2JS52 829 aa12□□□□□ -0.49
NSMCE1-206ENST00000563900 IL2RBP14784 551 aa12□□□□□ -0.49
NSMCE1-206ENST00000563900 MYT1Q01538 1121 aa12□□□□□ -0.49
NSMCE1-206ENST00000563900 EIF4A2Q14240 407 aaKnown RBP12□□□□□ -0.49
NSMCE1-206ENST00000563900 PARD3Q8TEW0 1356 aa12□□□□□ -0.49
NSMCE1-206ENST00000563900 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
NSMCE1-206ENST00000563900 PPM1GO15355 546 aaPredicted RBP11.99□□□□□ -0.49
NSMCE1-206ENST00000563900 IGSF1Q8N6C5 1336 aa11.99□□□□□ -0.49
NSMCE1-206ENST00000563900 OVOS2A0A0G2JMS6 1433 aa11.99□□□□□ -0.49
NSMCE1-206ENST00000563900 SHANK3Q9BYB0 1731 aa11.99□□□□□ -0.49
NSMCE1-206ENST00000563900 MTHFSP49914 203 aa11.98□□□□□ -0.49
NSMCE1-206ENST00000563900 DDX10Q13206 875 aaKnown RBP11.98□□□□□ -0.49
NSMCE1-206ENST00000563900 DDB1Q16531 1140 aa11.98□□□□□ -0.49
NSMCE1-206ENST00000563900 EYA1Q99502 592 aa11.98□□□□□ -0.49
NSMCE1-206ENST00000563900 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
NSMCE1-206ENST00000563900 IL13P35225 146 aa11.97□□□□□ -0.49
NSMCE1-206ENST00000563900 PDE3BQ13370 1112 aa11.97□□□□□ -0.49
NSMCE1-206ENST00000563900 FAM182BQ5T319 152 aa11.97□□□□□ -0.49
NSMCE1-206ENST00000563900 USHBP1Q8N6Y0 703 aa11.97□□□□□ -0.49
NSMCE1-206ENST00000563900 MARCH10Q8NA82 808 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-206ENST00000563900 PKD1L3Q7Z443 1732 aa11.97□□□□□ -0.49
NSMCE1-206ENST00000563900 TNS1Q9HBL0 1735 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-206ENST00000563900 KDRP35968 1356 aa11.96□□□□□ -0.49
NSMCE1-206ENST00000563900 ZNF316A6NFI3 1004 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms