RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 KCNH5Q8NCM2 988 aa22.37■■□□□ 1.17
LPCAT4-205ENST00000563748 ARHGEF25Q86VW2 580 aa22.36■■□□□ 1.17
LPCAT4-205ENST00000563748 ABCC6O95255 1503 aa22.34■■□□□ 1.17
LPCAT4-205ENST00000563748 USP31Q70CQ4 1352 aa22.34■■□□□ 1.17
LPCAT4-205ENST00000563748 PDE3BQ13370 1112 aa22.34■■□□□ 1.17
LPCAT4-205ENST00000563748 PUS7Q96PZ0 661 aaKnown RBP22.34■■□□□ 1.17
LPCAT4-205ENST00000563748 LRRC37A3O60309 1634 aa22.34■■□□□ 1.17
LPCAT4-205ENST00000563748 AXIN2Q9Y2T1 843 aa22.33■■□□□ 1.17
LPCAT4-205ENST00000563748 EN1Q05925 392 aaPredicted RBP22.32■■□□□ 1.16
LPCAT4-205ENST00000563748 WDR17Q8IZU2 1322 aa22.32■■□□□ 1.16
LPCAT4-205ENST00000563748 PEAK1Q9H792 1746 aa22.32■■□□□ 1.16
LPCAT4-205ENST00000563748 TRIM37O94972 964 aa22.31■■□□□ 1.16
LPCAT4-205ENST00000563748 TMC1Q8TDI8 760 aa22.31■■□□□ 1.16
LPCAT4-205ENST00000563748 TESK2Q96S53 571 aa22.31■■□□□ 1.16
LPCAT4-205ENST00000563748 SLC12A5Q9H2X9 1139 aa22.31■■□□□ 1.16
LPCAT4-205ENST00000563748 EDC4Q6P2E9 1401 aaKnown RBP22.31■■□□□ 1.16
LPCAT4-205ENST00000563748 SOX12O15370 315 aa22.3■■□□□ 1.16
LPCAT4-205ENST00000563748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.3■■□□□ 1.16
LPCAT4-205ENST00000563748 LTN1O94822 1766 aa22.3■■□□□ 1.16
LPCAT4-205ENST00000563748 TOM1L2Q6ZVM7 507 aa22.29■■□□□ 1.16
LPCAT4-205ENST00000563748 HDGFL2Q7Z4V5 671 aaPredicted RBP22.29■■□□□ 1.16
LPCAT4-205ENST00000563748 A0A1W2PP64 1363 aa22.29■■□□□ 1.16
LPCAT4-205ENST00000563748 ST20-MTHFSA0A0A6YYL1 179 aa22.28■■□□□ 1.16
LPCAT4-205ENST00000563748 NME9Q86XW9 330 aa22.28■■□□□ 1.16
LPCAT4-205ENST00000563748 TERF2IPQ9NYB0 399 aa22.28■■□□□ 1.16
LPCAT4-205ENST00000563748 RREB1Q92766 1687 aa22.28■■□□□ 1.16
LPCAT4-205ENST00000563748 SBF2Q86WG5 1849 aa22.27■■□□□ 1.16
LPCAT4-205ENST00000563748 LRP5O75197 1615 aa22.27■■□□□ 1.16
LPCAT4-205ENST00000563748 NINLQ9Y2I6 1382 aa22.27■■□□□ 1.16
LPCAT4-205ENST00000563748 PARD3Q8TEW0 1356 aa22.26■■□□□ 1.15
LPCAT4-205ENST00000563748 CAMKK2Q96RR4 588 aa22.25■■□□□ 1.15
LPCAT4-205ENST00000563748 OVOS2A0A0G2JMS6 1433 aa22.25■■□□□ 1.15
LPCAT4-205ENST00000563748 OVOS2A0A0J9YW53 1432 aa22.25■■□□□ 1.15
LPCAT4-205ENST00000563748 OVOS2Q6IE36 1432 aa22.25■■□□□ 1.15
LPCAT4-205ENST00000563748 SLC24A1O60721 1099 aa22.25■■□□□ 1.15
LPCAT4-205ENST00000563748 EZH2Q15910 746 aaKnown RBP22.25■■□□□ 1.15
LPCAT4-205ENST00000563748 CARD10Q9BWT7 1032 aa22.25■■□□□ 1.15
LPCAT4-205ENST00000563748 C11orf95C9JLR9 678 aaPredicted RBP22.24■■□□□ 1.15
LPCAT4-205ENST00000563748 APBA3O96018 575 aa22.24■■□□□ 1.15
LPCAT4-205ENST00000563748 NUP188Q5SRE5 1749 aa22.23■■□□□ 1.15
LPCAT4-205ENST00000563748 PSDA5PKW4 1024 aaPredicted RBP22.23■■□□□ 1.15
LPCAT4-205ENST00000563748 DDB1Q16531 1140 aa22.23■■□□□ 1.15
LPCAT4-205ENST00000563748 CDCA7Q9BWT1 371 aaPredicted RBP22.23■■□□□ 1.15
LPCAT4-205ENST00000563748 USP47Q96K76 1375 aa22.22■■□□□ 1.15
LPCAT4-205ENST00000563748 CSB-PGBD3P0DP91 1061 aa22.22■■□□□ 1.15
LPCAT4-205ENST00000563748 RGPD3A6NKT7 1758 aaPredicted RBP22.21■■□□□ 1.15
LPCAT4-205ENST00000563748 RGPD4Q7Z3J3 1758 aa22.21■■□□□ 1.15
LPCAT4-205ENST00000563748 CCDC7Q96M83 1385 aa22.2■■□□□ 1.14
LPCAT4-205ENST00000563748 ERBB3P21860 1342 aa22.18■■□□□ 1.14
LPCAT4-205ENST00000563748 BCL9O00512 1426 aa22.18■■□□□ 1.14
LPCAT4-205ENST00000563748 R3HDM1Q15032 1099 aaKnown RBP22.17■■□□□ 1.14
LPCAT4-205ENST00000563748 ANKRD36BQ8N2N9 1353 aa22.17■■□□□ 1.14
LPCAT4-205ENST00000563748 MARCH10Q8NA82 808 aaPredicted RBP22.16■■□□□ 1.14
LPCAT4-205ENST00000563748 TMF1P82094 1093 aa22.15■■□□□ 1.14
LPCAT4-205ENST00000563748 FAM208AQ9UK61 1670 aaKnown RBP22.15■■□□□ 1.14
LPCAT4-205ENST00000563748 TNS2Q63HR2 1409 aa22.14■■□□□ 1.14
LPCAT4-205ENST00000563748 ANKRD24Q8TF21 1146 aa22.12■■□□□ 1.13
LPCAT4-205ENST00000563748 YTHDC1Q96MU7 727 aaKnown RBP22.12■■□□□ 1.13
LPCAT4-205ENST00000563748 BCL11BQ9C0K0 894 aaPredicted RBP22.12■■□□□ 1.13
LPCAT4-205ENST00000563748 NLRP2Q9NX02 1062 aa22.12■■□□□ 1.13
LPCAT4-205ENST00000563748 GTF3C3Q9Y5Q9 886 aa22.12■■□□□ 1.13
LPCAT4-205ENST00000563748 MYOM1P52179 1685 aa22.11■■□□□ 1.13
LPCAT4-205ENST00000563748 EXOC5O00471 708 aa22.11■■□□□ 1.13
LPCAT4-205ENST00000563748 COG3Q96JB2 828 aa22.11■■□□□ 1.13
LPCAT4-205ENST00000563748 KIF20BQ96Q89 1820 aa22.1■■□□□ 1.13
LPCAT4-205ENST00000563748 PTF1AQ7RTS3 328 aa22.1■■□□□ 1.13
LPCAT4-205ENST00000563748 IP6K1Q92551 441 aa22.1■■□□□ 1.13
LPCAT4-205ENST00000563748 PLSCR1O15162 318 aa22.09■■□□□ 1.13
LPCAT4-205ENST00000563748 NHSQ6T4R5 1651 aa22.09■■□□□ 1.13
LPCAT4-205ENST00000563748 CCER2I3L3R5 266 aa22.08■■□□□ 1.12
LPCAT4-205ENST00000563748 CDCA8Q53HL2 280 aa22.08■■□□□ 1.12
LPCAT4-205ENST00000563748 IL2RBP14784 551 aa22.07■■□□□ 1.12
LPCAT4-205ENST00000563748 NBPF14Q5TI25 921 aa22.07■■□□□ 1.12
LPCAT4-205ENST00000563748 MAP3K19Q56UN5 1328 aa22.07■■□□□ 1.12
LPCAT4-205ENST00000563748 RGPD2P0DJD1 1756 aa22.05■■□□□ 1.12
LPCAT4-205ENST00000563748 FYB1O15117 783 aa22.04■■□□□ 1.12
LPCAT4-205ENST00000563748 HOXC9P31274 260 aa22.03■■□□□ 1.12
LPCAT4-205ENST00000563748 DDX10Q13206 875 aaKnown RBP22.03■■□□□ 1.12
LPCAT4-205ENST00000563748 RTL1A6NKG5 1358 aa22.03■■□□□ 1.12
LPCAT4-205ENST00000563748 FBLN1P23142 703 aa22.02■■□□□ 1.12
LPCAT4-205ENST00000563748 AMPHP49418 695 aa22.01■■□□□ 1.11
LPCAT4-205ENST00000563748 EIF4G2P78344 907 aaKnown RBP eCLIP22.01■■□□□ 1.11
LPCAT4-205ENST00000563748 GGNBP2Q9H3C7 697 aa22.01■■□□□ 1.11
LPCAT4-205ENST00000563748 PROM2Q8N271 834 aa22■■□□□ 1.11
LPCAT4-205ENST00000563748 LTV1Q96GA3 475 aaPredicted RBP22■■□□□ 1.11
LPCAT4-205ENST00000563748 BTAF1O14981 1849 aa22■■□□□ 1.11
LPCAT4-205ENST00000563748 ANP32CO43423 234 aa21.99■■□□□ 1.11
LPCAT4-205ENST00000563748 KCNQ2O43526 872 aa21.99■■□□□ 1.11
LPCAT4-205ENST00000563748 CASZ1Q86V15 1759 aa21.99■■□□□ 1.11
LPCAT4-205ENST00000563748 SHANK3Q9BYB0 1731 aa21.98■■□□□ 1.11
LPCAT4-205ENST00000563748 ANO8Q9HCE9 1232 aaPredicted RBP21.98■■□□□ 1.11
LPCAT4-205ENST00000563748 RRS1Q15050 365 aaKnown RBP21.97■■□□□ 1.11
LPCAT4-205ENST00000563748 CARD14Q9BXL6 1004 aa21.97■■□□□ 1.11
LPCAT4-205ENST00000563748 KAT6BQ8WYB5 2073 aa21.96■■□□□ 1.11
LPCAT4-205ENST00000563748 NSD3Q9BZ95 1437 aa21.96■■□□□ 1.11
LPCAT4-205ENST00000563748 TXNRD1Q16881 649 aa21.96■■□□□ 1.11
LPCAT4-205ENST00000563748 ACSBG1Q96GR2 724 aa21.96■■□□□ 1.11
LPCAT4-205ENST00000563748 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
LPCAT4-205ENST00000563748 KIF24Q5T7B8 1368 aa21.93■■□□□ 1.1
LPCAT4-205ENST00000563748 MEGF6O75095 1541 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms