RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-208ENST00000563688 ZFAND3Q9H8U3 227 aa9.77□□□□□ -0.85
SCAPER-208ENST00000563688 CDV3Q9UKY7 258 aaKnown RBP9.77□□□□□ -0.85
SCAPER-208ENST00000563688 GPR37L1O60883 481 aa9.76□□□□□ -0.85
SCAPER-208ENST00000563688 SLC10A4Q96EP9 437 aa9.76□□□□□ -0.85
SCAPER-208ENST00000563688 KCTD15Q96SI1 283 aaPredicted RBP9.76□□□□□ -0.85
SCAPER-208ENST00000563688 CCDC116Q8IYX3 515 aa9.75□□□□□ -0.85
SCAPER-208ENST00000563688 KIFC2Q96AC6 838 aa9.75□□□□□ -0.85
SCAPER-208ENST00000563688 MRPL14Q6P1L8 145 aaKnown RBP9.74□□□□□ -0.85
SCAPER-208ENST00000563688 ZBBXA8MT70 800 aa9.73□□□□□ -0.85
SCAPER-208ENST00000563688 FBXO45P0C2W1 286 aa9.73□□□□□ -0.85
SCAPER-208ENST00000563688 ZFP42Q96MM3 310 aa9.73□□□□□ -0.85
SCAPER-208ENST00000563688 EMILIN1Q9Y6C2 1016 aa9.73□□□□□ -0.85
SCAPER-208ENST00000563688 INTS6LQ5JSJ4 861 aaKnown RBP9.72□□□□□ -0.85
SCAPER-208ENST00000563688 PPP1R26Q5T8A7 1209 aaPredicted RBP9.72□□□□□ -0.85
SCAPER-208ENST00000563688 DZIP3Q86Y13 1208 aaKnown RBP9.71□□□□□ -0.86
SCAPER-208ENST00000563688 ESPNB1AK53 854 aa9.7□□□□□ -0.86
SCAPER-208ENST00000563688 NDUFB9Q9Y6M9 179 aa9.7□□□□□ -0.86
SCAPER-208ENST00000563688 SCARF1Q14162 830 aa9.69□□□□□ -0.86
SCAPER-208ENST00000563688 NBPF20Q3BBV1 942 aa9.69□□□□□ -0.86
SCAPER-208ENST00000563688 MEIOBQ8N635 442 aa9.69□□□□□ -0.86
SCAPER-208ENST00000563688 PURBQ96QR8 312 aaKnown RBP9.69□□□□□ -0.86
SCAPER-208ENST00000563688 DHX9Q08211 1270 aaKnown RBP9.68□□□□□ -0.86
SCAPER-208ENST00000563688 LCE2AQ5TA79 106 aaPredicted RBP9.68□□□□□ -0.86
SCAPER-208ENST00000563688 Q6ZVU0 165 aa9.68□□□□□ -0.86
SCAPER-208ENST00000563688 APBB1O00213 710 aa9.67□□□□□ -0.86
SCAPER-208ENST00000563688 NR1H3Q13133 447 aa9.67□□□□□ -0.86
SCAPER-208ENST00000563688 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
SCAPER-208ENST00000563688 CBLBQ13191 982 aa9.66□□□□□ -0.86
SCAPER-208ENST00000563688 ERVH48-1M5A8F1 160 aa9.65□□□□□ -0.86
SCAPER-208ENST00000563688 TREML4Q6UXN2 200 aa9.65□□□□□ -0.86
SCAPER-208ENST00000563688 LINC00528Q8N1L1 170 aa9.65□□□□□ -0.86
SCAPER-208ENST00000563688 TMPRSS4Q9NRS4 437 aa9.65□□□□□ -0.86
SCAPER-208ENST00000563688 TBC1D2BQ9UPU7 963 aa9.65□□□□□ -0.86
SCAPER-208ENST00000563688 PCDHB9Q9Y5E1 797 aa9.65□□□□□ -0.86
SCAPER-208ENST00000563688 GIGYF1O75420 1035 aaPredicted RBP9.64□□□□□ -0.87
SCAPER-208ENST00000563688 NFX1Q12986 1120 aaKnown RBP9.64□□□□□ -0.87
SCAPER-208ENST00000563688 C6orf118Q5T5N4 469 aa9.64□□□□□ -0.87
SCAPER-208ENST00000563688 SEPT12Q8IYM1 358 aa9.64□□□□□ -0.87
SCAPER-208ENST00000563688 TSEN34Q9BSV6 310 aaKnown RBP9.64□□□□□ -0.87
SCAPER-208ENST00000563688 LILRA1O75019 489 aa9.63□□□□□ -0.87
SCAPER-208ENST00000563688 TERTO14746 1132 aaKnown RBP9.62□□□□□ -0.87
SCAPER-208ENST00000563688 UPP2O95045 317 aa9.62□□□□□ -0.87
SCAPER-208ENST00000563688 BMP2P12643 396 aa9.62□□□□□ -0.87
SCAPER-208ENST00000563688 RAB15P59190 212 aa9.62□□□□□ -0.87
SCAPER-208ENST00000563688 MCCD1P59942 119 aaPredicted RBP9.62□□□□□ -0.87
SCAPER-208ENST00000563688 IRF5Q13568 498 aa9.62□□□□□ -0.87
SCAPER-208ENST00000563688 ZNF784Q8NCA9 323 aaPredicted RBP9.62□□□□□ -0.87
SCAPER-208ENST00000563688 ADD1P35611 737 aaKnown RBP9.61□□□□□ -0.87
SCAPER-208ENST00000563688 MCM6Q14566 821 aa9.61□□□□□ -0.87
SCAPER-208ENST00000563688 SOS2Q07890 1332 aaPredicted RBP9.6□□□□□ -0.87
SCAPER-208ENST00000563688 SOBPA7XYQ1 873 aa9.6□□□□□ -0.87
SCAPER-208ENST00000563688 PRM3Q9NNZ6 103 aa9.6□□□□□ -0.87
SCAPER-208ENST00000563688 SPINT1O43278 529 aa9.59□□□□□ -0.87
SCAPER-208ENST00000563688 WFS1O76024 890 aa9.59□□□□□ -0.87
SCAPER-208ENST00000563688 LCE2CQ5TA81 110 aa9.59□□□□□ -0.87
SCAPER-208ENST00000563688 KDF1Q8NAX2 398 aaPredicted RBP9.59□□□□□ -0.87
SCAPER-208ENST00000563688 GDPD2Q9HCC8 539 aa9.59□□□□□ -0.87
SCAPER-208ENST00000563688 NXF1Q9UBU9 619 aaKnown RBP9.59□□□□□ -0.87
SCAPER-208ENST00000563688 ZNF330Q9Y3S2 320 aaPredicted RBP9.59□□□□□ -0.87
SCAPER-208ENST00000563688 AGBL1Q96MI9 1066 aa9.58□□□□□ -0.88
SCAPER-208ENST00000563688 CCDC125Q86Z20 511 aa9.57□□□□□ -0.88
SCAPER-208ENST00000563688 ZNF592Q92610 1267 aa9.57□□□□□ -0.88
SCAPER-208ENST00000563688 MAN1A2O60476 641 aa9.56□□□□□ -0.88
SCAPER-208ENST00000563688 TMEM132AQ24JP5 1023 aa9.56□□□□□ -0.88
SCAPER-208ENST00000563688 RNF20Q5VTR2 975 aa9.56□□□□□ -0.88
SCAPER-208ENST00000563688 NPAS3Q8IXF0 933 aa9.56□□□□□ -0.88
SCAPER-208ENST00000563688 CEP126Q9P2H0 1117 aa9.56□□□□□ -0.88
SCAPER-208ENST00000563688 DNMT3LQ9UJW3 386 aa9.56□□□□□ -0.88
SCAPER-208ENST00000563688 TTLL8A6PVC2 850 aa9.55□□□□□ -0.88
SCAPER-208ENST00000563688 ADH1AP07327 375 aa9.55□□□□□ -0.88
SCAPER-208ENST00000563688 RELBQ01201 579 aa9.55□□□□□ -0.88
SCAPER-208ENST00000563688 CYLDQ9NQC7 956 aa9.55□□□□□ -0.88
SCAPER-208ENST00000563688 ZNF395Q9H8N7 513 aaPredicted RBP9.54□□□□□ -0.88
SCAPER-208ENST00000563688 ABL2P42684 1182 aa9.53□□□□□ -0.88
SCAPER-208ENST00000563688 PTGIRP43119 386 aa9.53□□□□□ -0.88
SCAPER-208ENST00000563688 ERVK-9P63128 1117 aa9.53□□□□□ -0.88
SCAPER-208ENST00000563688 COG6Q9Y2V7 657 aa9.53□□□□□ -0.88
SCAPER-208ENST00000563688 H3BM21 787 aa9.52□□□□□ -0.89
SCAPER-208ENST00000563688 CTSOP43234 321 aaPredicted RBP9.52□□□□□ -0.89
SCAPER-208ENST00000563688 VAC14Q08AM6 782 aa9.52□□□□□ -0.89
SCAPER-208ENST00000563688 PHTF2Q8N3S3 785 aa9.52□□□□□ -0.89
SCAPER-208ENST00000563688 INSM2Q96T92 566 aaPredicted RBP9.52□□□□□ -0.89
SCAPER-208ENST00000563688 FIGNL2A6NMB9 653 aa9.51□□□□□ -0.89
SCAPER-208ENST00000563688 SCTRP47872 440 aa9.51□□□□□ -0.89
SCAPER-208ENST00000563688 VEGFBP49765 207 aa9.51□□□□□ -0.89
SCAPER-208ENST00000563688 EIF4G2P78344 907 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCAPER-208ENST00000563688 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.51□□□□□ -0.89
SCAPER-208ENST00000563688 CC2D2BQ6DHV5 1058 aa9.51□□□□□ -0.89
SCAPER-208ENST00000563688 TRIM52Q96A61 297 aa9.51□□□□□ -0.89
SCAPER-208ENST00000563688 WASHC4Q2M389 1173 aa9.5□□□□□ -0.89
SCAPER-208ENST00000563688 SLC16A10Q8TF71 515 aa9.5□□□□□ -0.89
SCAPER-208ENST00000563688 CCDC85AQ96PX6 553 aaPredicted RBP9.5□□□□□ -0.89
SCAPER-208ENST00000563688 PCDHB11Q9Y5F2 797 aa9.5□□□□□ -0.89
SCAPER-208ENST00000563688 WIPF1O43516 503 aa9.49□□□□□ -0.89
SCAPER-208ENST00000563688 TSGA10IPQ3SY00 556 aa9.49□□□□□ -0.89
SCAPER-208ENST00000563688 TRAK2O60296 914 aa9.48□□□□□ -0.89
SCAPER-208ENST00000563688 FLIIQ13045 1269 aa9.48□□□□□ -0.89
SCAPER-208ENST00000563688 RNF217Q8TC41 542 aa9.48□□□□□ -0.89
SCAPER-208ENST00000563688 POM121Q96HA1 1249 aa9.48□□□□□ -0.89
SCAPER-208ENST00000563688 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms